prot_H-paniculata_contig1942.4909.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1942.4909.1
Unique Nameprot_H-paniculata_contig1942.4909.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length914
Homology
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BLAST of mRNA_H-paniculata_contig1942.4909.1 vs. uniprot
Match: D7FKN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKN2_ECTSI)

HSP 1 Score: 178 bits (451), Expect = 8.150e-44
Identity = 144/385 (37.40%), Postives = 199/385 (51.69%), Query Frame = 0 
Query:  531 QGIVKDGDAREVTFCSQSRGREDGRRKYLVGDVDEDDDTE---SDEGAAEIRVAGLSERIGLRCLQVEEECMRRERTVKRLFEEQLRGIRAGAQNTIRAAVGAERSRARKQSDEARKEAEEKEATMVAEAQSAEGRWNQEREALSMEASSAKSNLERQKRTFREAIDASQQEAKQALVNQKQALERGWAEERASLRRTAEDSQRRATEDRARAAKEATQQAHSRHGTLEAQVRSWKAKAEAAEKRALEERQRRRHLEAGAKGAFAEEVDKARKSQDRVLEDLRTKSEADREAHSQEVERLKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRLRLAHDAEMRKAGRETLRLQREVRRLQ 912
            +G +  G +++V    Q +  ED R   L    +E++D +    +E  +  RVA LS RI               R+  RLF+EQLRG+R GAQ   R  +  ER R ++   E ++  EEKE  +VA+ + AE  W  ERE+LS + ++AK  +E+ +R  R A +A++   K+AL  Q+   +RGWAEE+  LRR AED+ RRA E   R  +EA  +A +   +L+AQ+RSWKAKAE AE+RA EER++RR LEAG KG  A+EV+KA                 DR  H++E+ERL+E                                                     LRRLRLAHD EMRKAGR+ LRL+RE RR Q
Sbjct:   89 RGAMARGTSQQVDQHEQQQCFEDERAGGLAHSEEEEEDGDXXGDNEQESAGRVAELSRRIXXXXXXXXXXXXXXXRSQTRLFQEQLRGVRLGAQQVARRTIHDERIRQKQLLLETQQRFEEKEKGLVAKLELAEESWKAERESLSADTAAAKCEVEKCRRQARAAAEAARNTTKEALEKQRLDFQRGWAEEKGGLRRAAEDALRRAMEGNVREREEAATKAQTAQDSLDAQLRSWKAKAETAERRATEEREKRRGLEAGVKGVLAQEVEKAXXXXXXXXXXXXXXXXXDRATHAEEIERLQEEHRAGLLRVHQDKKSLFEAARRQWEKEMQELRREAVAKAEDAATRATAERSEALRRLRLAHDTEMRKAGRDILRLEREARRSQ 473
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BLAST of mRNA_H-paniculata_contig1942.4909.1 vs. uniprot
Match: A0A6H5JD13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD13_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 4.520e-36
Identity = 128/334 (38.32%), Postives = 168/334 (50.30%), Query Frame = 0 
Query:  579 RVAGLSERIGLRCLQVEEECMRRERTVKRLFEEQLRGIRAGAQNTIRAAVGAERSRARKQSDEARKEAEEKEATMVAEAQSAEGRWNQEREALSMEASSAKSNLERQKRTFREAIDASQQEAKQALVNQKQALERGWAEERASLRRTAEDSQRRATEDRARAAKEATQQAHSRHGTLEAQVRSWKAKAEAAEKRALEERQRRRHLEAGAKGAFAEEVDKARKSQDRVLEDLRTKSEADREAHSQEVERLKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRLRLAHDAEMRKAGRETLRLQREVRRLQ 912
            RVA LS RI +RC            +  RLF+EQLR +R GAQ   R  +  ER R ++   E ++  EEKE  +VA+   AE  W  ERE+L+   ++AKS +E+ +R  R A +A    +++AL  Q+  L+RGWAEE+  LRR AED+ RRA E  ARA +EA ++A +   +L+AQVRSWKAK E AE+RA EER++R+ LEAG KGA A+E                              ERL+E                                                     LRRLRLAHD EMRKAGR+ LRL+RE RR Q
Sbjct:  502 RVAELSRRIAMRCXXXXXXXXXXXXSQTRLFQEQLRSVRLGAQQVARRTIHDERIRQKQLLLETQQRFEEKERGLVAKLNLAEESWKVERESLNANTAAAKSEVEKCRRQARAAAEAGMNASREALEKQRLDLQRGWAEEKGGLRRAAEDALRRAMEGNARAREEAAKKAQAAQDSLDAQVRSWKAKTETAERRAAEEREKRKGLEAGVKGALAQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTERLQEEHRAALLRVHQDKKSLFEAARRKWEKEMQELRREAVAKAEDAATRATAERSEALRRLRLAHDTEMRKAGRDILRLEREARRCQ 835
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1942.4909.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FKN2_ECTSI8.150e-4437.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JD13_9PHAE4.520e-3638.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 668..699
NoneNo IPR availableCOILSCoilCoilcoord: 752..779
NoneNo IPR availableCOILSCoilCoilcoord: 810..881
NoneNo IPR availableCOILSCoilCoilcoord: 630..663

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1942contigH-paniculata_contig1942:988..12705 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1942.4909.1mRNA_H-paniculata_contig1942.4909.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1942 988..17674 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1942.4909.1 ID=prot_H-paniculata_contig1942.4909.1|Name=mRNA_H-paniculata_contig1942.4909.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=914bp
MTNPSKHHCTAPEKAGTTTVTHVIRLHRTGSVEVEQVGRHESETKYEKNP
LDTPDDRVVHDRTHSIAEENARHPPFANPPTEPTHSIENVGTLRSGPHIT
PVQHQYYMEEEKFWRERDVSHKSTLGVQNAGKPCGTESGHQMNTLERGTA
MRDPVFTGGMGTSAAGVVNHGVDCNRAPNRNSGDLAGFTHVNATLGVGAH
RRTALGYSANERSTANGNNDNCQQTISVLPDKNMPEEDRERHNIPYCATG
ISGPASVTATTARPHPQRENTRPSAVDEEQTGRLAIAARRRQEERRWARR
RLTSLRDSEKLLAGVLEAMEEPGALPAGCSASVRWNGKLQDDMPDGTCPP
ETRVATLRQKLTNLFSDRRSSNVRSSERFHGQTCTCSYCSSLSPSKTRWS
SRRLRRSTPRRRPDIATMGDTGRSAGQSPCPLPCTGFDGDFDDSESGFRE
AVGQRSTGVSAERQGQEMGHGHDEAKCAHRSSIGRGSAGDRKCFGGRSFG
DDDDDDDDDDSCLEKKIANECLRKSRRELGQGIVKDGDAREVTFCSQSRG
REDGRRKYLVGDVDEDDDTESDEGAAEIRVAGLSERIGLRCLQVEEECMR
RERTVKRLFEEQLRGIRAGAQNTIRAAVGAERSRARKQSDEARKEAEEKE
ATMVAEAQSAEGRWNQEREALSMEASSAKSNLERQKRTFREAIDASQQEA
KQALVNQKQALERGWAEERASLRRTAEDSQRRATEDRARAAKEATQQAHS
RHGTLEAQVRSWKAKAEAAEKRALEERQRRRHLEAGAKGAFAEEVDKARK
SQDRVLEDLRTKSEADREAHSQEVERLKEQHRNNLVRVHEEKKKLMNADR
EQWQRGMEEMREEATAKANEASNRAVAERSEALRRLRLAHDAEMRKAGRE
TLRLQREVRRLQV*
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