prot_H-paniculata_contig1936.4893.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1936.4893.1
Unique Nameprot_H-paniculata_contig1936.4893.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length178
Homology
BLAST of mRNA_H-paniculata_contig1936.4893.1 vs. uniprot
Match: D8LUB7_ECTSI (Intraflagellar transport protein 172 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUB7_ECTSI)

HSP 1 Score: 258 bits (660), Expect = 1.440e-76
Identity = 133/160 (83.12%), Postives = 146/160 (91.25%), Query Frame = 0
Query:    1 IYHASELSIVEYGRNEVRILGAVRTEHISGHLLSVRLSEKHPRRSDRDMARRKQS-TEGTKTVAYLLDAQTINIKNLITNATTSVNHDSRVDWLELNSRADLLLFRDRRRRLHLYNVRTQIRGTLLSYCTYVQWVPDSDVVVAQNRSALCVWYNIHAPDQ 159
            IY   EL+I EY RNE  ILGAVRTEHIS HLLSV LS+K PRR DRD+ARR+Q+ TEGTKTVAYLLDAQTINIK+L+TNAT+SV+HDS++DWLELNSRADLLLFRDRRRRLHLYN+RTQ RGTLL+YCTYVQWVPDSDVVVAQNR ALCVWYNIHAPDQ
Sbjct:  367 IYQDRELTIGEYARNE-GILGAVRTEHISAHLLSVCLSDKPPRRGDRDLARRRQNVTEGTKTVAYLLDAQTINIKDLVTNATSSVSHDSKIDWLELNSRADLLLFRDRRRRLHLYNLRTQTRGTLLNYCTYVQWVPDSDVVVAQNRGALCVWYNIHAPDQ 525          
BLAST of mRNA_H-paniculata_contig1936.4893.1 vs. uniprot
Match: F0YKY3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKY3_AURAN)

HSP 1 Score: 211 bits (537), Expect = 5.060e-60
Identity = 108/163 (66.26%), Postives = 131/163 (80.37%), Query Frame = 0
Query:    1 IYHASELSIVEYGRNEVRILGAVRTEHISGHLLSVRLSEKHPRRSDR----DMARRKQSTEGTKTVAYLLDAQTINIKNLITNATTSVNHDSRVDWLELNSRADLLLFRDRRRRLHLYNVRTQIRGTLLSYCTYVQWVPDSDVVVAQNRSALCVWYNIHAPDQ 159
            +YHA EL++VEYG NE   LG VRT+HISGHLLSVR++E+ P  +D     D  R + S    K +AYLLDAQTINIK+L+T ++T+V+ DS++DWLELN RA LLLFRDRRR+LHLY++ TQ R TLL+YCTYVQWVPDSDVVVAQNR+ LCVWYNIH PDQ
Sbjct:  390 VYHAGELALVEYGCNEA--LGTVRTDHISGHLLSVRINER-PNPTDGNPPLDDERERSSWPDNKKIAYLLDAQTINIKDLVTGSSTTVSQDSKIDWLELNGRASLLLFRDRRRQLHLYDIETQTRTTLLNYCTYVQWVPDSDVVVAQNRNNLCVWYNIHTPDQ 549          
BLAST of mRNA_H-paniculata_contig1936.4893.1 vs. uniprot
Match: F0Y092_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y092_AURAN)

HSP 1 Score: 210 bits (534), Expect = 1.280e-59
Identity = 108/163 (66.26%), Postives = 131/163 (80.37%), Query Frame = 0
Query:    1 IYHASELSIVEYGRNEVRILGAVRTEHISGHLLSVRLSEKHPRRSDR----DMARRKQSTEGTKTVAYLLDAQTINIKNLITNATTSVNHDSRVDWLELNSRADLLLFRDRRRRLHLYNVRTQIRGTLLSYCTYVQWVPDSDVVVAQNRSALCVWYNIHAPDQ 159
            +YHA EL++VEYG NE   LG VRT+HISGHLLSVR++E+ P  +D     D  R + S    K +AYLLDAQTINIK+L+T ++T+V+ DS++DWLELN RA LLLFRDRRR+LHLY++ TQ R TLL+YCTYVQWVPDSDVVVAQNR+ LCVWYNIH PDQ
Sbjct:  436 VYHAGELALVEYGCNET--LGTVRTDHISGHLLSVRINER-PSPTDGSPPLDDERERSSGLDNKKIAYLLDAQTINIKDLVTGSSTTVSQDSKIDWLELNGRASLLLFRDRRRQLHLYDIETQTRTTLLNYCTYVQWVPDSDVVVAQNRNNLCVWYNIHTPDQ 595          
BLAST of mRNA_H-paniculata_contig1936.4893.1 vs. uniprot
Match: A0A835YVD3_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVD3_9STRA)

HSP 1 Score: 207 bits (526), Expect = 1.370e-59
Identity = 108/172 (62.79%), Postives = 131/172 (76.16%), Query Frame = 0
Query:    1 IYHASELSIVEYGRNEVRILGAVRTEHISGHLLSVRLSEKHPRRS---DRDMARRKQSTEGTKTVAYLLDAQTINIKNLITNATTSVNHDSRVDWLELNSRADLLLFRDRRRRLHLYNVRTQIRGTLLSYCTYVQWVPDSDVVVAQNRSALCVWYNIHAPDQARAQNKQYRG 169
            ++ A ELS+VEYG NEV    AVRT+HIS HLLSVRL+E+ PR     D D  R  +     K +AYLLDAQT+N+KNL+T A+ +VNHD R+DWLELNSR +LLLFRD+RR+LHL+NV  Q R TLL+ C YVQWVPDSDVVVAQ+R++LCVWYNIHAPDQ    N Q +G
Sbjct:  414 VFAAGELSVVEYGHNEVA--AAVRTDHISAHLLSVRLNERPPRTGAPDDPDTPRADEHDGQNKKMAYLLDAQTVNVKNLVTQASVTVNHDCRIDWLELNSRGNLLLFRDKRRQLHLFNVDNQTRTTLLNLCNYVQWVPDSDVVVAQSRTSLCVWYNIHAPDQVT--NHQIKG 581          
BLAST of mRNA_H-paniculata_contig1936.4893.1 vs. uniprot
Match: A0A7S4E4W1_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E4W1_9STRA)

HSP 1 Score: 209 bits (532), Expect = 2.380e-59
Identity = 104/159 (65.41%), Postives = 130/159 (81.76%), Query Frame = 0
Query:    1 IYHASELSIVEYGRNEVRILGAVRTEHISGHLLSVRLSEKHPRRSDRDMARRKQSTEGTKTVAYLLDAQTINIKNLITNATTSVNHDSRVDWLELNSRADLLLFRDRRRRLHLYNVRTQIRGTLLSYCTYVQWVPDSDVVVAQNRSALCVWYNIHAPDQ 159
            +YHA EL++VEYG NE    G VRT++ISGHLLSVR++E  P R+D D A        +K +AYLLDAQTINIK+L+T ++++V+ +S++DWLELN RA+LLLFRD+RR+LHLY+VRTQ R TLL+YCTYVQWVP SDVVVAQNR +LCVWYNIH PDQ
Sbjct:  435 VYHAGELTLVEYGCNEA--CGTVRTDYISGHLLSVRMNEPQPTRADDDFA-------NSKKMAYLLDAQTINIKDLVTGSSSTVSQNSKIDWLELNGRANLLLFRDKRRQLHLYDVRTQARTTLLTYCTYVQWVPHSDVVVAQNRGSLCVWYNIHTPDQ 584          
BLAST of mRNA_H-paniculata_contig1936.4893.1 vs. uniprot
Match: A0A835Z5T0_9STRA (Intraflagellar transport protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5T0_9STRA)

HSP 1 Score: 207 bits (526), Expect = 1.520e-58
Identity = 108/172 (62.79%), Postives = 131/172 (76.16%), Query Frame = 0
Query:    1 IYHASELSIVEYGRNEVRILGAVRTEHISGHLLSVRLSEKHPRRS---DRDMARRKQSTEGTKTVAYLLDAQTINIKNLITNATTSVNHDSRVDWLELNSRADLLLFRDRRRRLHLYNVRTQIRGTLLSYCTYVQWVPDSDVVVAQNRSALCVWYNIHAPDQARAQNKQYRG 169
            ++ A ELS+VEYG NEV    AVRT+HIS HLLSVRL+E+ PR     D D  R  +     K +AYLLDAQT+N+KNL+T A+ +VNHD R+DWLELNSR +LLLFRD+RR+LHL+NV  Q R TLL+ C YVQWVPDSDVVVAQ+R++LCVWYNIHAPDQ    N Q +G
Sbjct:  318 VFAAGELSVVEYGHNEVA--AAVRTDHISAHLLSVRLNERPPRTGAPDDPDTPRADEHDGQNKKMAYLLDAQTVNVKNLVTQASVTVNHDCRIDWLELNSRGNLLLFRDKRRQLHLFNVDNQTRTTLLNLCNYVQWVPDSDVVVAQSRTSLCVWYNIHAPDQVT--NHQIKG 485          
BLAST of mRNA_H-paniculata_contig1936.4893.1 vs. uniprot
Match: A0A7S2W0W8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0W8_9STRA)

HSP 1 Score: 202 bits (513), Expect = 8.550e-57
Identity = 100/159 (62.89%), Postives = 127/159 (79.87%), Query Frame = 0
Query:    1 IYHASELSIVEYGRNEVRILGAVRTEHISGHLLSVRLSEKHPRRSDRDMARRKQSTEGTKTVAYLLDAQTINIKNLITNATTSVNHDSRVDWLELNSRADLLLFRDRRRRLHLYNVRTQIRGTLLSYCTYVQWVPDSDVVVAQNRSALCVWYNIHAPDQ 159
            +YHA ELS++EYG NE   LG+VRTE+ISGHLLSVR++E    R+         + E +K +AYLLD QT+ +K+L+T  + ++NHDS++DW+ELN+R +LLLFRD+RR LHLY+V  QIR TLL++CTYVQWVPDSDVVVAQNRS LCVWYNIHAPDQ
Sbjct:  407 VYHAGELSLIEYGSNEP--LGSVRTEYISGHLLSVRINE----RAVGGDGAAPDTEEDSKQIAYLLDTQTVALKDLVTQTSATINHDSKIDWIELNTRGNLLLFRDKRRHLHLYDVDQQIRHTLLNFCTYVQWVPDSDVVVAQNRSNLCVWYNIHAPDQ 559          
BLAST of mRNA_H-paniculata_contig1936.4893.1 vs. uniprot
Match: A0A5D6XF22_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Pythiaceae TaxID=4782 RepID=A0A5D6XF22_9STRA)

HSP 1 Score: 191 bits (486), Expect = 3.660e-53
Identity = 99/169 (58.58%), Postives = 129/169 (76.33%), Query Frame = 0
Query:    1 IYHASELSIVEYGRNEVRILGAVRTEHISGHLLSVRLSEKHPRRSDRDMARRKQ---------STEGTKTVAYLLDAQTINIKNLITNATTSVNHDSRVDWLELNSRADLLLFRDRRRRLHLYNVRTQIRGTLLSYCTYVQWVPDSDVVVAQNRSALCVWYNIHAPDQA 160
            +Y A ELS++EYG+N+  ILG+VRTEH+S HLLSVR++E+  + +D   A  K           T  +K VA+LLD QTI++K+L  +A+T++NHDSR+DWLELNSR  LLLFRD+RR+LHL+++  Q R TLL+YC YVQWVPDSDVVVAQNR+ L VWYNI APD+A
Sbjct:  424 VYQAGELSLIEYGQND--ILGSVRTEHLSTHLLSVRINERAQQLADAGSAHSKTLPTAGSGGPETAESKKVAFLLDLQTISVKDLHLHASTTINHDSRIDWLELNSRGSLLLFRDKRRQLHLFDLDAQRRSTLLNYCNYVQWVPDSDVVVAQNRTNLSVWYNIRAPDKA 590          
BLAST of mRNA_H-paniculata_contig1936.4893.1 vs. uniprot
Match: F0WBZ0_9STRA (Intraflagellar transport protein 172 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WBZ0_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.720e-52
Identity = 100/164 (60.98%), Postives = 125/164 (76.22%), Query Frame = 0
Query:    1 IYHASELSIVEYGRNEVRILGAVRTEHISGHLLSVRLSEKHPRRSDRDMARRKQSTE----GTKTVAYLLDAQTINIKNLITNATTSVNHDSRVDWLELNSRADLLLFRDRRRRLHLYNVRTQIRGTLLSYCTYVQWVPDSDVVVAQNRSALCVWYNIHAPDQA 160
            +Y A EL+++EYGRNEV  LG VRTEH++ HLLS+R++E+ P   +    R KQS        K +AYLLD QTI+IK+L T+ + +VNHD R+DWLELN R +LLLFRD+RR+LHL++V  Q R TLL+YC YVQWVPDSDVVVAQNRS L VWYNI APD+A
Sbjct:  409 VYQAGELTLIEYGRNEV--LGCVRTEHLNPHLLSIRINER-PSLEEVISQRNKQSDRVMALTNKKIAYLLDLQTISIKDLHTHTSATVNHDCRIDWLELNGRGNLLLFRDKRRQLHLFDVEAQHRVTLLNYCNYVQWVPDSDVVVAQNRSNLSVWYNIRAPDKA 569          
BLAST of mRNA_H-paniculata_contig1936.4893.1 vs. uniprot
Match: A0A482ST81_9ARCH (ANAPC4_WD40 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482ST81_9ARCH)

HSP 1 Score: 189 bits (479), Expect = 3.140e-52
Identity = 96/159 (60.38%), Postives = 126/159 (79.25%), Query Frame = 0
Query:    1 IYHASELSIVEYGRNEVRILGAVRTEHISGHLLSVRLSEKHPRRSDRDMARRKQSTEGTKTVAYLLDAQTINIKNLITNATTSVNHDSRVDWLELNSRADLLLFRDRRRRLHLYNVRTQIRGTLLSYCTYVQWVPDSDVVVAQNRSALCVWYNIHAPDQ 159
            IY+A E +IVEYG +EV  LG+VRT++++ H++S+R++E+ P  +D             K +A+LLDAQTI+IK+L+T A+ +V+HDSR+DWLELNSRA LLLFRD+RR LHL+N+ TQ R  LL++CTYVQWVP SDVVVAQNR+ LCVWYNIHAPDQ
Sbjct:  342 IYYAGEANIVEYGIDEV--LGSVRTQYMTSHVISLRINER-PHDTD------------NKKIAFLLDAQTISIKDLVTQASITVSHDSRIDWLELNSRASLLLFRDKRRYLHLFNLETQSRSQLLNFCTYVQWVPGSDVVVAQNRNTLCVWYNIHAPDQ 485          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1936.4893.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LUB7_ECTSI1.440e-7683.13Intraflagellar transport protein 172 n=1 Tax=Ectoc... [more]
F0YKY3_AURAN5.060e-6066.26Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
F0Y092_AURAN1.280e-5966.26Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A835YVD3_9STRA1.370e-5962.79Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A7S4E4W1_9STRA2.380e-5965.41Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]
A0A835Z5T0_9STRA1.520e-5862.79Intraflagellar transport protein n=1 Tax=Tribonema... [more]
A0A7S2W0W8_9STRA8.550e-5762.89Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A5D6XF22_9STRA3.660e-5358.58Uncharacterized protein (Fragment) n=2 Tax=Pythiac... [more]
F0WBZ0_9STRA1.720e-5260.98Intraflagellar transport protein 172 putative n=1 ... [more]
A0A482ST81_9ARCH3.140e-5260.38ANAPC4_WD40 domain-containing protein n=1 Tax=arch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15722:SF2INTRAFLAGELLAR TRANSPORT PROTEIN 172 HOMOLOGcoord: 1..161
NoneNo IPR availablePANTHERPTHR15722IFT140/172-RELATEDcoord: 1..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1936contigH-paniculata_contig1936:678..2939 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1936.4893.1mRNA_H-paniculata_contig1936.4893.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1936 678..2939 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1936.4893.1 ID=prot_H-paniculata_contig1936.4893.1|Name=mRNA_H-paniculata_contig1936.4893.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=178bp
IYHASELSIVEYGRNEVRILGAVRTEHISGHLLSVRLSEKHPRRSDRDMA
RRKQSTEGTKTVAYLLDAQTINIKNLITNATTSVNHDSRVDWLELNSRAD
LLLFRDRRRRLHLYNVRTQIRGTLLSYCTYVQWVPDSDVVVAQNRSALCV
WYNIHAPDQARAQNKQYRGCLGRREQE*
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