mRNA_H-paniculata_contig19357.4892.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig19357.4892.1 vs. uniprot
Match: D7FH15_ECTSI (Palmitoyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH15_ECTSI) HSP 1 Score: 262 bits (669), Expect = 7.710e-80 Identity = 135/227 (59.47%), Postives = 162/227 (71.37%), Query Frame = 2
Query: 641 RFDVESNG-GGLAAVKLRTE----------VARPRHSVVLARPMPFEPITDPFAWVCDIARRPKFGHQYVLCPGRPSLSRRQGGHNRVGLSVGPHWSGVIYTISIIAVATLFLTKFIM-KDLPPWHQPVTVMCSLLTVTFLLATAVVDPGIVVESGE-ESAGVPFCEVCSIWRPEDAEHCEECGVCVFGMDHHCPWMGKCVGRGNILWFRLFNGSWMCLLIFVMASI 1282
RFD+ES+ GG V+ V+RP + +A P PFEPITDPFA+VC++ARRPKFGHQYVLCP R SRR+G RVGLSVGPHW+GVIYTIS+I V TLFL + ++ ++ PW QPV V CS++TV FLLATAV DPGIVVES E E A +CE CSIWRP+ AEH +FG+DH PWMGKCVGRGNILWFRLFNGSW+ L F+M ++
Sbjct: 33 RFDIESSSFGGSGTVREXXXXXQDHTRDRAVSRPSRGIQVATPAPFEPITDPFAFVCEMARRPKFGHQYVLCPER---SRRRG-DRRVGLSVGPHWAGVIYTISMIFVITLFLVRVLIGPNVAPWCQPVIVACSMVTVVFLLATAVADPGIVVESAESEGASCGYCEECSIWRPQGAEHXXXXXXXIFGLDHXXPWMGKCVGRGNILWFRLFNGSWILFLSFLMVAM 255
BLAST of mRNA_H-paniculata_contig19357.4892.1 vs. uniprot
Match: A0A6V1ME69_HETAK (Palmitoyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1ME69_HETAK) HSP 1 Score: 140 bits (354), Expect = 1.150e-34 Identity = 74/187 (39.57%), Postives = 99/187 (52.94%), Query Frame = 2
Query: 755 TDPFAWVCDIARRPKFGHQYVLCPGRPSLSRRQGGHNRVGLSVGPHWSGVIYTISIIAVATLFLTKFIMKDLPPWHQPVTVMCSLL----TVTFLLATAVVDPGIVVESGEESA------GVPFCEVCSIWRPEDAEHCEECGVCVFGMDHHCPWMGKCVGRGNILWFRLFNGSWMCLLIFVMASII 1285
TDPF ++C P G+ Y+L R ++VGPHWSG ++T II T FL + W +P + + + L A DPGIV + +A G+ FC+ CSI++PE A HC +CGVC+ G DHHCPWMGKC+GRGNI +F LFN SW L+F+ II
Sbjct: 55 TDPFYFICKRFGFPMLGNNYILRTTDDGDPR---------MTVGPHWSGTVFTTVIILSGTYFLAPLV------WGRPAALAATAFFFGCSTASLWLVACTDPGIVRRATAPAAAAAAADGLRFCDKCSIYQPEGAVHCNDCGVCIEGHDHHCPWMGKCLGRGNICYFWLFNASWFFYLLFLFYIII 226
BLAST of mRNA_H-paniculata_contig19357.4892.1 vs. uniprot
Match: A0A7S2GXV6_9STRA (Palmitoyltransferase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GXV6_9STRA) HSP 1 Score: 122 bits (306), Expect = 5.050e-28 Identity = 66/166 (39.76%), Postives = 93/166 (56.02%), Query Frame = 2
Query: 749 PITDPFAWVCDIARRPKFGHQYVLCPGRPSLSRRQGGHNRVGLSVGPHWSGVIYTISIIAVATLFLTKFIMKDLPPWHQPVTVMCSLLTVTFLLATAVVDPGIVVESG-EESAGVP-FCEVCSIWRPEDAEHCEECGVCVFGMDHHCPWMGKCVGRGNILWFRLFN 1240
P DP + VC+ R + + YVL Q R+ + VGPHW+G+ T SI+ ++++ F + C ++T+TFL T DPGIV S ES P FC+VC + +P DA HC+ECG CV +DHHCPW+GKC+G+GN+ WF+ FN
Sbjct: 73 PSGDPCSKVCEHLRISRLANSYVLL---------QLDKPRLLILVGPHWAGLASTTSIVLLSSVAFISFQTLHSTGLTVIAIIFC-VVTLTFLFLTGCSDPGIVRTSFVSESGQTPCFCDVCGVNQPPDAMHCDECGCCVEELDHHCPWIGKCIGKGNMRWFKAFN 228
BLAST of mRNA_H-paniculata_contig19357.4892.1 vs. uniprot
Match: K8Z302_NANGC (Palmitoyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z302_NANGC) HSP 1 Score: 124 bits (312), Expect = 1.270e-27 Identity = 56/138 (40.58%), Postives = 86/138 (62.32%), Query Frame = 2
Query: 878 SVGPHWSGVIYTISIIAVATLFLTKFIMKDLPPWHQPVTVMCSLLTVTFLLATAVVDPGIVVESGEESAGVP---FCEVCSIWRPEDAEHCEECGVCVFGMDHHCPWMGKCVGRGNILWFRLFNGSWMCLLIFVMASI 1282
+VGPHW+GV++T+ ++ +A+ + L P+ V + + LT+ LL TA +DPG++ S S +P +C +C ++ A HCE+CGVC+ GMDHHCPWMG CVG GN+ F FN W+ ++FV+A +
Sbjct: 206 TVGPHWAGVVFTVFLVCLASFLFISHVCVPLGPFFVLVAGVYTGLTLLTLLRTACLDPGLITRSVPPS--LPRRKYCSICRLYTGPTARHCEDCGVCIEGMDHHCPWMGHCVGSGNMGAFLCFNCVWLTYVLFVLACL 341
BLAST of mRNA_H-paniculata_contig19357.4892.1 vs. uniprot
Match: A0A2P4YE67_9STRA (Palmitoyltransferase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YE67_9STRA) HSP 1 Score: 122 bits (305), Expect = 2.880e-27 Identity = 74/209 (35.41%), Postives = 112/209 (53.59%), Query Frame = 2
Query: 755 TDPFAWVCDIARRPKFGHQYVLCPGRPSLSRRQGGHNRVGLS-VGPHWSGVIYTISIIAVAT-LFLTKFIMKDLPPWHQP-VTVMCSLLTVTFLLATAVVDPGIV-------------------VESGE---ESAGVP-------FCEVCSIWRPEDAEHCEECGVCVFGMDHHCPWMGKCVGRGNILWFRLFNGSWMCLLIFVMASII 1285
TDP + +C + + G Y+L ++ G L VGPHW GV+ T++II VAT +FL++ + W++ +T+ +T+ +L T DPGIV +E+G+ E+ G P +C++CSI + +HCE+CGVCV G DHHCPWMGKC+GRGN+ F++FN SW+ + FV+ I
Sbjct: 59 TDPLSCLC-CCKFKRLGQSYIL--HERNVVSNDGITTETKLVIVGPHWIGVLVTLAIILVATSMFLSQHVQTM--SWYETLITLGLCGMTLYYLYQTTCTDPGIVQSSKQKDVSQTDDENEVSELEAGQLPVEAFGPPRRSSRRRYCDICSIEQDRTTDHCEDCGVCVAGYDHHCPWMGKCIGRGNMHAFKMFNVSWVIYVCFVLFIAI 262
BLAST of mRNA_H-paniculata_contig19357.4892.1 vs. uniprot
Match: M4BFB6_HYAAE (Palmitoyltransferase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BFB6_HYAAE) HSP 1 Score: 115 bits (288), Expect = 1.950e-25 Identity = 78/237 (32.91%), Postives = 115/237 (48.52%), Query Frame = 2
Query: 722 VLARPMPFEPITDPFAWVCDIARRPKFGHQYVLCPGRPSLSRRQG-GHNRVGLSVGPHWSGVIYTISIIAVAT-LFLTKFIMKDLPPWHQPVTVMCSLLTVTFLLATAVVDPGIV------------------VESGEESAGVP-----------------------FCEVCSIWRPEDAEHCEECGVCVFGMDHHCPWMGKCVGRGNILWFRLFNGSWMCLLIFVMASIIFRGHDR 1303
VLA+P+ +DP A +C + + GH Y+L R G G L VGPHW GV+ T+SI+ + T +FL + + +P ++ +T+ T+ +L T+ DPGIV E E + FC++CSI + +HCE+CGVC+ G DHHCPWM KC+GRGN FR+FN SW+ ++FV+ I G+D+
Sbjct: 17 VLAQPVNS---SDPLACLC-CCKFKRLGHGYIL------YERSDGDGMKTTLLVVGPHWIGVLVTLSIVLLCTGMFLFQCV-ATMPWYNTLMTLGLCGTTLYYLFQTSCTDPGIVQPLQHKKDESLTQDESEATELEAEHVAIKTIAMESSVVRYAHDRRLRPTRRRFCDICSIQQDCSTDHCEDCGVCIAGHDHHCPWMSKCIGRGNKHAFRMFNISWIISVVFVIC-IAISGNDQ 241
BLAST of mRNA_H-paniculata_contig19357.4892.1 vs. uniprot
Match: A0A6U3TQ93_9STRA (Palmitoyltransferase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3TQ93_9STRA) HSP 1 Score: 119 bits (299), Expect = 2.290e-25 Identity = 66/182 (36.26%), Postives = 96/182 (52.75%), Query Frame = 2
Query: 776 CDIARRPKFGHQYVLCPGRPSLSRRQGGHNRVGLSVGPHWSGVIYTISIIAVATLFLTKFIMKDLPPWHQPVTVMC--SLLTVTFLLATAVVDPGIVVES-------GEESAGVPFCEVCSIWRPEDAEHCEECGVCVFGMDHHCPWMGKCVGRGNILWFRLFNGSWMCLLIFVMASIIFRG 1294
C A+ G VLCP SL RR G +G+ VGPHW G + T I+ A+ F TK +D + + + C +L + L A DPG+V G + +C++CS+++P DA HC +C VCV G DHHCPWMG+C+G+ N+ F FN SW+ L++ + + G
Sbjct: 215 CVPAKPYYIGDTTVLCP---SLYRRYG----LGV-VGPHWPGTLCTFGILWGASYFYTKKAYEDDSLGNITLGICCFFTLWSTISLCRVAFKDPGVVTRERQQNMVDGRDLTNWRYCDICSVYQPPDAAHCPDCNVCVEGYDHHCPWMGQCIGKKNMSAFVTFNFSWLLYLVYAILWVTIMG 388
BLAST of mRNA_H-paniculata_contig19357.4892.1 vs. uniprot
Match: A0A7R9Y9J1_9STRA (Palmitoyltransferase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9J1_9STRA) HSP 1 Score: 113 bits (283), Expect = 7.460e-25 Identity = 66/187 (35.29%), Postives = 96/187 (51.34%), Query Frame = 2
Query: 755 TDPFAWVCDIARRP-KFGHQYVLCPGRPSLSRRQGGHNRVGLSVGPHWSGVIYTISIIAVATLFLTKFIMKDLPPWHQPVT----VMCSLLTVTFLLATAVVDPGIV-----VESGEESAGVP-FCEVCSIWRPEDAEHCEECGVCVFGMDHHCPWMGKCVGRGNILWFRLFNGSWMCLLIFVMASI 1282
+DP A+ C + K GHQYVL L+R G R ++ GPHWSG ++ ++I TK + P V + LLT L TA DPGI+ + E++A +C++C +W P +HC ECGVC+ DHHC WMGKCVG+GN+ F FN +W+ +++ +
Sbjct: 47 SDPLAFACRLLPCVNKLGHQYVL------LTRADG---RPLVTFGPHWSGTLFAQAVIVGVVWGFTK---QHTPIGKSAVASAGMMFFGLLTTVLLWITAGSDPGILRKHAALRDDEDAAEDDVYCDICDMWGPPGTKHCRECGVCILKHDHHCVWMGKCVGQGNMRSFIYFNMAWVSAFMYLFLCL 221
BLAST of mRNA_H-paniculata_contig19357.4892.1 vs. uniprot
Match: H3HCL7_PHYRM (Palmitoyltransferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCL7_PHYRM) HSP 1 Score: 117 bits (292), Expect = 1.260e-23 Identity = 68/192 (35.42%), Postives = 102/192 (53.12%), Query Frame = 2
Query: 755 TDPFAWVCDIARRPKFGHQYVLCPGRPSLSRRQGGHNRVGLSVGPHWSGVIYTISIIAVAT-LFLTKFIMKDLPPWHQPVTV--MCSLLTVTFLLATAVVDPGIVVESGEESAGVP------------FCEVCSIWRPEDAEHCEECGVCVFGMDHHCPWMGKCVGRGNILWFRLFNGSWMCLLIFVMASII 1285
TDP + +C R + GH Y+L R ++ G + + VGPHW GV+ T+ I+ V+T +FL++ + + PW+ + +CS+ T+ +L T DP E E P FC++C I + HCE+CGVCV G DH WMGKC+GRGN+ F++FN SW+ + FV+ I
Sbjct: 612 TDPLSCLCCCKLR-RLGHCYILHERR--VAAADGSMDTKLVIVGPHWIGVLVTLGIVLVSTSMFLSQHV--AIMPWYDTLITFGLCSM-TLYYLFQTTCTDPA---EGVMEVQAAPLDEPRRRPSRRRFCDICGIEQDRSTGHCEDCGVCVAGYDHXXXWMGKCIGRGNMHAFKMFNVSWVVYVTFVLFVAI 794
BLAST of mRNA_H-paniculata_contig19357.4892.1 vs. uniprot
Match: A0A3R6XQH8_9STRA (Palmitoyltransferase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6XQH8_9STRA) HSP 1 Score: 108 bits (270), Expect = 3.090e-23 Identity = 57/173 (32.95%), Postives = 85/173 (49.13%), Query Frame = 2
Query: 881 VGPHWSGVIYTISIIAVAT-LFLTKFIM-----------------KDLPPWHQPVTVMCSLLTVTFLLATAVVDPGIVVESG--EESAGVPFC---------------------EVCSIWRPEDAEHCEECGVCVFGMDHHCPWMGKCVGRGNILWFRLFNGSWMCLLIFVMA 1276
VGPHW GV+ T+S+I V+T LF+ + + L W+ ++V + T FL T DPGIV + A + C ++C + + EHC++CGVC+ DHHCPWMGKC+G+ N+ WF+LFN +W+ L+FV+
Sbjct: 19 VGPHWIGVLVTLSLIVVSTVLFIGQQYAVLHFQSHVAYSHDVARCRGLDAWYTCLSVFMCIATTYFLFKTTCTDPGIVPRGTLHTDPALISRCSYCGGDLRSLSTARLIQLLIIDICDVHQSRHTEHCDDCGVCIEKYDHHCPWMGKCIGKANMKWFQLFNLAWVLYLVFVLV 191 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19357.4892.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig19357.4892.1 >prot_H-paniculata_contig19357.4892.1 ID=prot_H-paniculata_contig19357.4892.1|Name=mRNA_H-paniculata_contig19357.4892.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=293bp MGLFREGAASARLADDGIEENSSEVIATVVSLLLDEGNVGQSTSNNDAEQback to top mRNA from alignment at H-paniculata_contig19357:1388..3921+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig19357.4892.1 ID=mRNA_H-paniculata_contig19357.4892.1|Name=mRNA_H-paniculata_contig19357.4892.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2534bp|location=Sequence derived from alignment at H-paniculata_contig19357:1388..3921+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig19357:1388..3921+ >mRNA_H-paniculata_contig19357.4892.1 ID=mRNA_H-paniculata_contig19357.4892.1|Name=mRNA_H-paniculata_contig19357.4892.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1758bp|location=Sequence derived from alignment at H-paniculata_contig19357:1388..3921+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |