prot_H-paniculata_contig19345.4890.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19345.4890.1
Unique Nameprot_H-paniculata_contig19345.4890.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length185
Homology
BLAST of mRNA_H-paniculata_contig19345.4890.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 5.170e-40
Identity = 84/188 (44.68%), Postives = 117/188 (62.23%), Query Frame = 0
Query:    2 ALESAIEEARTEGLPPNGFTELRKMVMNCHFHAFRRALSGDPPADVEPLRVHVPTDARAARARPRPMSRDKAEWLDKHFTKLAQASMVFANPQARFSSVAMAVPKKD----TYRMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCALDLLQGYWQMPLDPQAQEIFTMVTANGVYTPTRVPQG 185
            AL+ A++ A   GL P G   LR++V +  F+ FRR + GDPPA+V P+ V + T A+  +AR R  + DK +WL      L    +V+ N QA ++S  M  PK+     TYR V D+RAVN  I  S  PMP+LE   + ++ A+ + +LD+LQGYW MPL P+AQEIFTM+   G+Y+P RVPQG
Sbjct:  601 ALDRAVDSAADAGLSPWGLDRLRQVV-DRRFNVFRRGVRGDPPANVPPMTVKLKTGAKPVKARLRTYNPDKTKWLTTCLAALVALGLVYVNLQAIWASAIMLTPKRSGDKVTYRFVGDFRAVNRQIEKSPGPMPDLEADMQRLSRATCYGSLDMLQGYWGMPLAPEAQEIFTMIGPGGLYSPERVPQG 787          
BLAST of mRNA_H-paniculata_contig19345.4890.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 1.610e-36
Identity = 86/186 (46.24%), Postives = 111/186 (59.68%), Query Frame = 0
Query:    1 AALESAIEEARTEGLPPNGFTELRKMVMNCHFHAFRRALS-GDPPADVEPLRVHVPTDARAARARPRPMSRDKAEWLDKHFTKLAQASMVFANPQARFSSVAMAVPKKDTYRMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCALDLLQGYWQMPLDPQAQEIFTMVTANGVYTPTRVPQG 185
            A+L+SA+  A   GL       LR ++    ++AFRR L  GDPPA+VEPLRV +   AR  +ARPR  +  K  WL       A   +VF N QA ++S AMA PKK  YR+V+D+RA N  +      MPN E     ++ A  + +LDLLQ YWQ PL P+AQEIFT+ T  G+YTP RVPQG
Sbjct:  708 ASLDSAVSSAAAAGLEEPHVGRLRGIISE-RWNAFRRGLRHGDPPANVEPLRVTLKPGARPVKARPRVYNPIKTAWL-------AGLGLVFLNMQAVWASAAMATPKKGGYRLVSDFRAANKQVEKVPGVMPNPEASIAQLSAAKFYGSLDLLQWYWQCPLAPEAQEIFTIATPGGLYTPKRVPQG 885          
BLAST of mRNA_H-paniculata_contig19345.4890.1 vs. uniprot
Match: A0A6A4AUS0_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4AUS0_9STRA)

HSP 1 Score: 126 bits (317), Expect = 7.910e-32
Identity = 71/179 (39.66%), Postives = 100/179 (55.87%), Query Frame = 0
Query:   14 GLPPNGFTELRKMVMNCHFHAFRRALSGDPPADVEPLRVHVPTDARAARARPRPMSRDKAEWLDKHFTKLAQASMVFANPQARFSSVAMAVPKKDTY-------RMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCALDLLQGYWQMPLDPQAQEIFTMVTANGVYTPTRVPQG 185
            GL  +G  +LR  VM      FR     DPP  V P++V +  DAR  RA+PRP S +   +LD+H   L    +V+ N ++R++S    V K++         RM  D R+VN    P + PMP L+ +   + GA VF  LD  +GYWQ+PL P +QE+++ VT  G+YTPTRVP G
Sbjct:    2 GLSLDGRAKLRA-VMRVRVDNFRLEFGNDPPVRVTPMQVRLKDDARPVRAQPRPYSPNDRAFLDRHTAALLAHGLVYKNHRSRWASAPRIVRKREQDVDPTADPRMTIDTRSVNERTEPMSWPMPVLDVVLGELEGARVFFVLDWFRGYWQLPLHPDSQELYSFVTHRGIYTPTRVPMG 179          
BLAST of mRNA_H-paniculata_contig19345.4890.1 vs. uniprot
Match: A0A6A3FJD6_9STRA (Reverse transcriptase domain-containing protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3FJD6_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.800e-31
Identity = 75/190 (39.47%), Postives = 106/190 (55.79%), Query Frame = 0
Query:    3 LESAIEEARTEGLPPNGFTELRKMVMNCHFHAFRRALSGDPPADVEPLRVHVPTDARAARARPRPMSRDKAEWLDKHFTKLAQASMVFANPQARFSSVAMAVPKKDTY-------RMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCALDLLQGYWQMPLDPQAQEIFTMVTANGVYTPTRVPQG 185
            +E  IE A   GL  +G  +LR  VM    + FR     DPP  V P++V +  DAR  RA+PR  S +   +LD+H   L    +V+ N ++R++S    V K++         RM  D  +VN    P + PMP L+ +  G+ GA VF  LD L+GYWQ+PL P +QE+++ VT  G+YTPTRVP G
Sbjct:  212 VERKIEIAEQMGLTLDGRAKLRA-VMRVRVNNFRLEFGNDPPVRVAPMQVRLKDDARPVRAQPRRYSPNDRAFLDRHTAALLAHGLVYKNHRSRWASAPRIVRKREQDVDPTADPRMTIDTWSVNERTEPMSWPMPVLDVVLGGLEGARVFFVLDWLRGYWQLPLHPDSQELYSFVTHRGIYTPTRVPMG 400          
BLAST of mRNA_H-paniculata_contig19345.4890.1 vs. uniprot
Match: H3H656_PHYRM (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H656_PHYRM)

HSP 1 Score: 129 bits (324), Expect = 2.620e-31
Identity = 75/190 (39.47%), Postives = 105/190 (55.26%), Query Frame = 0
Query:    3 LESAIEEARTEGLPPNGFTELRKMVMNCHFHAFRRALSGDPPADVEPLRVHVPTDARAARARPRPMSRDKAEWLDKHFTKLAQASMVFANPQARFSSVAMAVPKKDTY-------RMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCALDLLQGYWQMPLDPQAQEIFTMVTANGVYTPTRVPQG 185
            LES +E A   GL  +G  +LR  ++     +FR     DPP  V P++V +   A   RA+PR  S +   +LD+H T L +  ++F N ++R++S    V KK+         RM  D R+VN    P   PMP LE +   + GA VF  LD  +GYWQ+PL P +QEI++ VT  G+YTPTRVP G
Sbjct:  612 LESKVEIATRMGLTLDGSAKLRG-ILQMRADSFRLEFGHDPPVRVAPMQVRLKPGATPIRAQPRRYSPNDRAFLDRHTTTLMKHGLIFKNHRSRWASAPRIVKKKEQADDPLADPRMTIDTRSVNERTEPMPWPMPVLEVVIGELEGAKVFFVLDWFRGYWQLPLHPDSQEIYSFVTHRGIYTPTRVPMG 800          
BLAST of mRNA_H-paniculata_contig19345.4890.1 vs. uniprot
Match: H3H4S7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H4S7_PHYRM)

HSP 1 Score: 129 bits (324), Expect = 2.780e-31
Identity = 75/190 (39.47%), Postives = 105/190 (55.26%), Query Frame = 0
Query:    3 LESAIEEARTEGLPPNGFTELRKMVMNCHFHAFRRALSGDPPADVEPLRVHVPTDARAARARPRPMSRDKAEWLDKHFTKLAQASMVFANPQARFSSVAMAVPKKDTY-------RMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCALDLLQGYWQMPLDPQAQEIFTMVTANGVYTPTRVPQG 185
            LES +E A   GL  +G  +LR  ++     +FR     DPP  V P++V +   A   RA+PR  S +   +LD+H T L +  ++F N ++R++S    V KK+         RM  D R+VN    P   PMP LE +   + GA VF  LD  +GYWQ+PL P +QEI++ VT  G+YTPTRVP G
Sbjct:  614 LESKVEIATRMGLTLDGSAKLRG-ILQMRADSFRLEFGHDPPVRVAPMQVRLKPGATPIRAQPRRYSPNDRAFLDRHTTTLMKHGLIFKNHRSRWASAPRIVKKKEQADDPLADPRMTIDTRSVNERTEPMPWPMPVLEVVIGELEGAKVFFVLDWFRGYWQLPLHPDSQEIYSFVTHRGIYTPTRVPMG 802          
BLAST of mRNA_H-paniculata_contig19345.4890.1 vs. uniprot
Match: A0A6A4DRK1_9STRA (Reverse transcriptase domain-containing protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4DRK1_9STRA)

HSP 1 Score: 125 bits (313), Expect = 6.170e-31
Identity = 71/190 (37.37%), Postives = 102/190 (53.68%), Query Frame = 0
Query:    3 LESAIEEARTEGLPPNGFTELRKMVMNCHFHAFRRALSGDPPADVEPLRVHVPTDARAARARPRPMSRDKAEWLDKHFTKLAQASMVFANPQARFSSVAMAVPKKDTY-------RMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCALDLLQGYWQMPLDPQAQEIFTMVTANGVYTPTRVPQG 185
            LE  +E A   GL  +G  +LR  ++      FR     DPP  VEP++V +   A   RA+PR  S +   +LD+H   L +  +VF N ++R+ S    V K++         RM  D R+VN    P   PMP L+ +   + GA V+  LD  +GYWQ+PL P +QE+++ VT  G+YTPTRVP G
Sbjct:  112 LEKKVEVAEKMGLTLDGRAKLRA-ILRVRVDCFRVEFGNDPPVRVEPMQVRLKAGASPVRAQPRRYSPNDRAFLDRHTAALLEHGLVFKNHRSRWPSAPRIVRKREQETDPTADPRMTIDTRSVNERTEPMPWPMPVLDVVLGELEGARVYFVLDWFRGYWQLPLHPDSQELYSFVTHRGIYTPTRVPMG 300          
BLAST of mRNA_H-paniculata_contig19345.4890.1 vs. uniprot
Match: A0A6H5JCK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK9_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 8.290e-31
Identity = 77/186 (41.40%), Postives = 104/186 (55.91%), Query Frame = 0
Query:    1 AALESAIEEARTEGLPPNGFTELRKMVMNCHFHAFRRALS-GDPPADVEPLRVHVPTDARAARARPRPMSRDKAEWLDKHFTKLAQASMVFANPQARFSSVAMAVPKKDTYRMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCALDLLQGYWQMPLDPQAQEIFTMVTANGVYTPTRVPQG 185
            A+L+SA+  A   GL       LR ++    ++AFR  +  GDPPA+VEPLRV +   A   +ARPR  +  K  WL           +VF N QA  +S AMA PKK  YR+++D+RA NN +      MPN E      +      +LDLL+ Y Q PL P+AQ+IFT+ T  G++TP RVPQG
Sbjct:  482 ASLDSAVSSAVVAGLDEPHVGRLRSIIRE-RWNAFRPGMRPGDPPANVEPLRVTLKPGALPVKARPRTYNPIKTAWLAGCMASPVVLGLVFLNMQAVSASAAMATPKKGGYRLLSDFRAANNQVEKVPGVMPNPEASMAQFSATKFHGSLDLLRAYCQRPLSPEAQKIFTIATPRGLHTPKRVPQG 666          
BLAST of mRNA_H-paniculata_contig19345.4890.1 vs. uniprot
Match: A0A0G4J790_PLABS (Reverse transcriptase domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J790_PLABS)

HSP 1 Score: 127 bits (318), Expect = 1.620e-30
Identity = 68/187 (36.36%), Postives = 107/187 (57.22%), Query Frame = 0
Query:    1 AALESAIEEARTEGLPPNGFTELRKMVMNCHFHAFRRALSGDPPADVEPLRVHVPTDARAARARPRPMSRDKAEWLDKHFTKLAQASMVFANPQARFSSVAMAVPKKDT--YRMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCALDLLQGYWQMPLDPQAQEIFTMVTANGVYTPTRVPQG 185
            A+L   I +AR  G+   G   LR +++  H + FR  L  D P ++EP+   +  DA   R RPR  +  + E+LD+    L + ++++ N  +R++S  + V K +   YR+  D R VN+   P+A PMPN+E   R +AG + F  +D  +G+W MP+  + QEIF+ +T +GVYTPTR  QG
Sbjct:  250 ASLTRLIHQARLNGMSRQGVARLR-LILRRHVNEFRTQLGQDGPVNIEPMITKLQPDATPYRCRPRSYNPKQKEFLDEMIKMLLENNLIYLNMNSRWASPVLVVKKPNGKGYRLCVDLRQVNSRTVPTAWPMPNIEAASRKLAGMTCFFTIDAHKGFWLMPIAKECQEIFSFMTDDGVYTPTRSIQG 435          
BLAST of mRNA_H-paniculata_contig19345.4890.1 vs. uniprot
Match: A0A6A3FJ70_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3FJ70_9STRA)

HSP 1 Score: 126 bits (317), Expect = 2.310e-30
Identity = 70/182 (38.46%), Postives = 102/182 (56.04%), Query Frame = 0
Query:    7 IEEARTEGLPPNGFTELRKMVMNCHFHAFRRALSGDPPADVEPLRVHVPTDARAARARPRPMSRDKAEWLDKHFTKLAQASMVFANPQARFSSVAMAVPK---KDTYRMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCALDLLQGYWQMPLDPQAQEIFTMVTANGVYTPTRVPQG 185
            I++A   G PP   + LR  V++ +   +R  L  D PA V P  V +  DA   R +PR  S  ++++L  H  +L Q  +V  N  +R++  A+ V K   KD +R+  DYR VN +  P A  +PNL  +   + GA      D+ +G+WQ+PLD  +QEIF++ T  GVYTPTRVPQG
Sbjct:   40 IQDAEANGFPPRMMSSLRTTVLD-YGDVWRARLGADGPARVRPYSVKLKPDAIPFRCKPRRYSPLQSDFLRSHVAELQQFGLVRLNNASRWACAAVPVRKAGLKDAFRLTTDYRPVNRMTVPIAAAVPNLVVVTSRVRGAQAMAKFDMFKGFWQLPLDEDSQEIFSIKTDEGVYTPTRVPQG 220          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19345.4890.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7F6_9PHAE5.170e-4044.68Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A5_9PHAE1.610e-3646.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A4AUS0_9STRA7.910e-3239.66Reverse transcriptase domain-containing protein (F... [more]
A0A6A3FJD6_9STRA1.800e-3139.47Reverse transcriptase domain-containing protein n=... [more]
H3H656_PHYRM2.620e-3139.47Reverse transcriptase domain-containing protein n=... [more]
H3H4S7_PHYRM2.780e-3139.47Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A6A4DRK1_9STRA6.170e-3137.37Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JCK9_9PHAE8.290e-3141.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0G4J790_PLABS1.620e-3036.36Reverse transcriptase domain-containing protein n=... [more]
A0A6A3FJ70_9STRA2.310e-3038.46Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10coord: 52..185
e-value: 2.3E-26
score: 94.4
NoneNo IPR availableGENE3D3.30.70.270coord: 128..155
e-value: 2.3E-26
score: 94.4
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 33..185
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 85..185
score: 9.306

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19345contigH-paniculata_contig19345:2405..2959 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19345.4890.1mRNA_H-paniculata_contig19345.4890.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19345 2405..2959 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19345.4890.1 ID=prot_H-paniculata_contig19345.4890.1|Name=mRNA_H-paniculata_contig19345.4890.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=185bp
AALESAIEEARTEGLPPNGFTELRKMVMNCHFHAFRRALSGDPPADVEPL
RVHVPTDARAARARPRPMSRDKAEWLDKHFTKLAQASMVFANPQARFSSV
AMAVPKKDTYRMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCALD
LLQGYWQMPLDPQAQEIFTMVTANGVYTPTRVPQG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom