mRNA_H-paniculata_contig1934.4889.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1934.4889.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 141 bits (355), Expect = 2.540e-38 Identity = 70/141 (49.65%), Postives = 90/141 (63.83%), Query Frame = 1
Query: 1 NTIHVDASWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHIPKLMFICAVSRPDSAHDFDRKIGIWRVCVIKETQKT-------TARRARG----------------EEYEVDVTIDAEWYRSWYLEDLLSAVKSKMWWLEGE 354
N +H+D SWFYL+R+KEKVR+F GE+ G +V H+SH+PK+M I A +RPD AHDFD KIGIWR+CVI+ Q++ TA R EEYE D TIDAEWY+ WY++ LL A+K KM WL +
Sbjct: 153 NVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSK 293
BLAST of mRNA_H-paniculata_contig1934.4889.1 vs. uniprot
Match: A0A5D6XR23_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XR23_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 3.100e-11 Identity = 37/113 (32.74%), Postives = 60/113 (53.10%), Query Frame = 1
Query: 7 IHVDASWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHIPKLMFICAVSRPD----SAHDFDRKIGIWRVCVIKETQKTTARRARGEEYEVDVTIDAEWYRSWYLEDLLSAVKSK 333
+H+D WF + + K +V + P E QHKSH+PKLMF+CA++RP + FDR IGIW ++++ R G + + E Y++ + +++ AV SK
Sbjct: 28 VHIDEKWFVVNKTKRRVYLTPTEPNPQR-HAQHKSHLPKLMFLCAITRPRVDPATGASFDRGIGIWPFAEEIPAYRSSSNRQAGTLETKPLPANKETYKAMIMTEVVPAVVSK 139
BLAST of mRNA_H-paniculata_contig1934.4889.1 vs. uniprot
Match: A0A6G0X8U9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8U9_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 3.360e-11 Identity = 39/113 (34.51%), Postives = 62/113 (54.87%), Query Frame = 1
Query: 7 IHVDASWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHIPKLMFICAVSRPDSAHD----FDRKIGIWRVCVIKETQKTTARRARGEEYEVDVTIDAEWYRSWYLEDLLSAVKSK 333
IH+D WF+L +DK + GEE + S +HKSHIPKLMF+ AV RP H FD K+GI+ + ++++ +A+G + T+ + Y + +L A+ +K
Sbjct: 153 IHLDEKWFFLDKDKRTFYLVKGEE-LPSRTARHKSHIPKLMFLTAVGRPQYDHGTSQYFDGKLGIFPFVIHGTAKRSSRHQAKGAPVLIPQTVTRDIYVDALVNHVLPAILTK 264
BLAST of mRNA_H-paniculata_contig1934.4889.1 vs. uniprot
Match: A0A024UI08_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UI08_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 1.180e-10 Identity = 36/115 (31.30%), Postives = 64/115 (55.65%), Query Frame = 1
Query: 1 NTIHVDASWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHIPKLMFICAVSRPD-SAH---DFDRKIGIWRVCVIKETQKTTARRARGEEYEVDVTIDAEWYRSWYLEDLLSAVKSK 333
+T+H+D WFY+ + + ++ +E V K Q K H+ K+MF+ AV+RP AH +D KIG W +++ + + RG+ V + E YRS+ ++ ++ A+KS+
Sbjct: 33 DTVHIDEKWFYISKVNRRYYLW-NDEPVPMRKCQSKRHLMKVMFLTAVARPRFDAHRRKSWDGKIGTWPFTMVRPALRNSKNFKRGDAITEPVVVTKEVYRSFLVDKVIPAIKSR 146
BLAST of mRNA_H-paniculata_contig1934.4889.1 vs. uniprot
Match: F0WV30_9STRA (Transposase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WV30_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 5.110e-10 Identity = 33/111 (29.73%), Postives = 58/111 (52.25%), Query Frame = 1
Query: 7 IHVDASWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHIPKLMFICAVSRPD----SAHDFDRKIGIWRVCVIKETQKTTARRARGEEYEVDVTIDAEWYRSWYLEDLLSAVK 327
+H+D WF++ + K +V + P E + +HKSHIPK+MF+CAV+RP + FD ++G+W ++ + R G + E Y+ ++ +L A+K
Sbjct: 209 VHLDEKWFFMKKTKRRVYLTPTEP-TPYLHTRHKSHIPKIMFLCAVARPRINSCTGEVFDGRLGMWPFANYAPAERASRNREAGTLVLKSFPANKETYKRMLIDSVLPAIK 318
BLAST of mRNA_H-paniculata_contig1934.4889.1 vs. uniprot
Match: A0A484N8H9_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484N8H9_9ASTE) HSP 1 Score: 62.4 bits (150), Expect = 6.540e-9 Identity = 40/114 (35.09%), Postives = 59/114 (51.75%), Query Frame = 1
Query: 7 IHVDASWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHIPKLMFICAVSRP----DSAHDFDRKIGIWRVCVIKETQKTTARRARGE-EYEVDVTIDAEWYRSWYLEDLLSAVKSK 333
IH+D WF + ++K P E Q KSHIPK+MF+ AVSRP D A +D KIGI+ + ++++ R G E + +I+ + + LE LL A+K K
Sbjct: 210 IHIDEKWFNITKEKTTFYALPDEPDPYRT-AQSKSHIPKIMFLAAVSRPRFGNDGAVVWDGKIGIFPFTYEAQAKRSSKNRPAGTLEVKATTSINRDEIKKMLLEKLLPAIKEK 322
BLAST of mRNA_H-paniculata_contig1934.4889.1 vs. uniprot
Match: UPI001C27B5CF (uncharacterized protein LOC121800956 n=2 Tax=Salvia splendens TaxID=180675 RepID=UPI001C27B5CF) HSP 1 Score: 61.6 bits (148), Expect = 1.080e-8 Identity = 38/116 (32.76%), Postives = 61/116 (52.59%), Query Frame = 1
Query: 1 NTIHVDASWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHIPKLMFICAVSRPDSAHD----FDRKIGIWRVCVIKETQKTTARRARGE-EYEVDVTIDAEWYRSWYLEDLLSAVKSK 333
NTIH+D WFY+ + ++ + P E++ + K I K+MF+CAVSRP D FD KIGI+ ++ + R RG E + +++ E R L ++ A+K+K
Sbjct: 60 NTIHIDEKWFYMTKASDRYYLLPDEDEPYRA-CKSKRFITKVMFMCAVSRPQFGTDGQTIFDDKIGIFSFTEQVPAKRKSKNRPRGTLETKPIPSVNKEAMRECLLNQIIPAIKAK 174
BLAST of mRNA_H-paniculata_contig1934.4889.1 vs. uniprot
Match: Q8W1P5_ZEADI (Transposase (Fragment) n=1 Tax=Zea diploperennis TaxID=4576 RepID=Q8W1P5_ZEADI) HSP 1 Score: 58.9 bits (141), Expect = 1.110e-8 Identity = 34/111 (30.63%), Postives = 60/111 (54.05%), Query Frame = 1
Query: 13 VDASWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHIPKLMFICAVSRP---DSAHDFDRKIGIWRVCVIKETQKTTARRARGE-EYEVDVTIDAEWYRSWYLEDLLSAVKSK 333
+D WF+L R E+ + P E+ + K++IPKLMF+CA SRP + FD KIG + + + ++++ R G E + +I + R + +E +L A+++K
Sbjct: 1 IDEKWFFLTRKSERYYLLPDEDDPHRT-CKSKNNIPKLMFLCATSRPRFENGVCTFDGKIGCFPLVTFERAKRSSVNRPAGTMEVKPITSIKRDVIREFLIEKVLPAIRAK 110
BLAST of mRNA_H-paniculata_contig1934.4889.1 vs. uniprot
Match: Q8W1R1_AVESA (Transposase (Fragment) n=1 Tax=Avena sativa TaxID=4498 RepID=Q8W1R1_AVESA) HSP 1 Score: 58.5 bits (140), Expect = 1.600e-8 Identity = 38/112 (33.93%), Postives = 60/112 (53.57%), Query Frame = 1
Query: 13 VDASWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHIPKLMFICAVSRP--DSAHD--FDRKIGIWRVCVIKETQKTTARRARGE-EYEVDVTIDAEWYRSWYLEDLLSAVKSK 333
+D WFY R +K + E +HKSHI K+MF+CAV+RP D+A + FD K+G+W +K + R RG E +V ++ + R + + +L A+K+K
Sbjct: 1 IDEKWFYRSRLNQKFYLCNDEPDPHRC-TKHKSHIDKVMFLCAVARPRFDAAGNCTFDGKLGVWAFVEEVAAKKKSKNRGRGTLETKVLPKVNMQVNRQYLINHVLPAIKAK 111
BLAST of mRNA_H-paniculata_contig1934.4889.1 vs. uniprot
Match: UPI0020096116 (uncharacterized protein LOC125197723 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI0020096116) HSP 1 Score: 60.8 bits (146), Expect = 2.150e-8 Identity = 37/116 (31.90%), Postives = 61/116 (52.59%), Query Frame = 1
Query: 1 NTIHVDASWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHIPKLMFICAVSRPDSAHD----FDRKIGIWRVCVIKETQKTTARRARGE-EYEVDVTIDAEWYRSWYLEDLLSAVKSK 333
NT+H+D WFY+ + ++ + P E++ + K I K+MF+CAVSRP D FD KIGI+ ++ + R RG E + +++ E R L ++ A+K+K
Sbjct: 99 NTVHIDEKWFYMTKASDRYYLLPDEDEPYR-SCKSKRFITKVMFMCAVSRPQFGTDGQTIFDGKIGIFPFTEQVPAKRKSKNRPRGTLETKPIPSVNKEAMRECLLNQIIPAIKAK 213 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1934.4889.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1934.4889.1 >prot_H-paniculata_contig1934.4889.1 ID=prot_H-paniculata_contig1934.4889.1|Name=mRNA_H-paniculata_contig1934.4889.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=120bp NTIHVDASWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHIPKLMFICAVSRback to top mRNA from alignment at H-paniculata_contig1934:16047..16406- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1934.4889.1 ID=mRNA_H-paniculata_contig1934.4889.1|Name=mRNA_H-paniculata_contig1934.4889.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=360bp|location=Sequence derived from alignment at H-paniculata_contig1934:16047..16406- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1934:16047..16406- >mRNA_H-paniculata_contig1934.4889.1 ID=mRNA_H-paniculata_contig1934.4889.1|Name=mRNA_H-paniculata_contig1934.4889.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=720bp|location=Sequence derived from alignment at H-paniculata_contig1934:16047..16406- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |