prot_H-paniculata_contig19324.4883.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19324.4883.1
Unique Nameprot_H-paniculata_contig19324.4883.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length101
Homology
BLAST of mRNA_H-paniculata_contig19324.4883.1 vs. uniprot
Match: D8LSW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW6_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 8.600e-38
Identity = 68/101 (67.33%), Postives = 79/101 (78.22%), Query Frame = 0
Query:    1 DNAESWEGWVYALCVVLGGVLFSFSHHLHFFQTWILGMELRVATTAVLYDKILRLRLSSLGQVTTGHLVNLATTDVERFHWAAIFTNYIWLAPAETLVIAY 101
            D +ESWEGW YA  VVLGGVLFSF      F  W LGM+LR++TT VLYDKILRLRLSSLGQ++TGHLVNL T+DVERF +  +F NY+W AP E+LVI Y
Sbjct:  125 DRSESWEGWTYASAVVLGGVLFSFFXXXXXFVGWTLGMQLRISTTTVLYDKILRLRLSSLGQISTGHLVNLTTSDVERFQYGGLFVNYLWEAPLESLVILY 225          
BLAST of mRNA_H-paniculata_contig19324.4883.1 vs. uniprot
Match: D8LSW3_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW3_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 3.320e-33
Identity = 64/101 (63.37%), Postives = 74/101 (73.27%), Query Frame = 0
Query:    1 DNAESWEGWVYALCVVLGGVLFSFSHHLHFFQTWILGMELRVATTAVLYDKILRLRLSSLGQVTTGHLVNLATTDVERFHWAAIFTNYIWLAPAETLVIAY 101
            + + SWEGW YA  VVLGGV   F  H  FF  + LGM+LR+ TT +LYDKILRLRLSSLGQ++TGHLVNL TTDVE F  A  F NY+W AP E+LVI Y
Sbjct:   25 EASASWEGWTYASVVVLGGVFICFFIHHFFFVGYTLGMQLRICTTTILYDKILRLRLSSLGQISTGHLVNLTTTDVEAFQIAGTFVNYLWGAPLESLVILY 125          
BLAST of mRNA_H-paniculata_contig19324.4883.1 vs. uniprot
Match: D8LSW4_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW4_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 3.510e-31
Identity = 60/101 (59.41%), Postives = 74/101 (73.27%), Query Frame = 0
Query:    1 DNAESWEGWVYALCVVLGGVLFSFSHHLHFFQTWILGMELRVATTAVLYDKILRLRLSSLGQVTTGHLVNLATTDVERFHWAAIFTNYIWLAPAETLVIAY 101
            + + SWEGW YA  VVLGG+L  F  H   F  ++LGM+LR++TT +LYDKILRLRLS LGQ++TGHLVNL TTDVE F     F NY+W AP ++LVI Y
Sbjct:   72 ETSASWEGWTYASVVVLGGLLIGFFLHHFNFVGYMLGMQLRISTTTILYDKILRLRLSLLGQISTGHLVNLTTTDVEAFQKGGTFVNYLWGAPLQSLVILY 172          
BLAST of mRNA_H-paniculata_contig19324.4883.1 vs. uniprot
Match: A0A835YMC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMC7_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 2.530e-21
Identity = 50/94 (53.19%), Postives = 63/94 (67.02%), Query Frame = 0
Query:    8 GWVYALCVVLGGVLFSFSHHLHFFQTWILGMELRVATTAVLYDKILRLRLSSLGQVTTGHLVNLATTDVERFHWAAIFTNYIWLAPAETLVIAY 101
            GW  A  +V  G++     H  +   W LGME+R+A TA +YDKILR+RL +L  VTTGH++NLATTDVERF    IF  Y+W AP ET+VI Y
Sbjct:  221 GWGSAAVLVACGLVGPVFIHHFYISAWELGMEMRLAGTAAIYDKILRVRLGALAGVTTGHVINLATTDVERFILMGIFWPYLWEAPLETVVILY 314          
BLAST of mRNA_H-paniculata_contig19324.4883.1 vs. uniprot
Match: A0A8J5CN58_CHIOP (Multidrug resistance-associated protein 4 n=1 Tax=Chionoecetes opilio TaxID=41210 RepID=A0A8J5CN58_CHIOP)

HSP 1 Score: 95.9 bits (237), Expect = 6.360e-21
Identity = 43/99 (43.43%), Postives = 69/99 (69.70%), Query Frame = 0
Query:    1 DNAESWEGWVYALCVVLGGVLFSFSHHLHFFQTWILGMELRVATTAVLYDKILRLRLSSLGQVTTGHLVNLATTDVERFHWAAIFTNYIWLAPAETLVI 99
            D   + +GW+++  VV+G +L+ FSHH +FF     GM LR+++ +++Y K LRL  ++LG+ TTG +VNL + DV RF  +AIF +YIW+ P +TL++
Sbjct:   95 DGYTAVDGWLFSTGVVMGSLLYIFSHHPYFFGVQHGGMTLRISSCSLIYRKSLRLSKAALGKTTTGQMVNLLSNDVNRFDTSAIFLHYIWIGPVQTLIV 193          
BLAST of mRNA_H-paniculata_contig19324.4883.1 vs. uniprot
Match: A0A0P4VXN7_SCYOL (Uncharacterized protein n=8 Tax=Portunidae TaxID=6757 RepID=A0A0P4VXN7_SCYOL)

HSP 1 Score: 95.5 bits (236), Expect = 8.700e-21
Identity = 42/93 (45.16%), Postives = 66/93 (70.97%), Query Frame = 0
Query:    7 EGWVYALCVVLGGVLFSFSHHLHFFQTWILGMELRVATTAVLYDKILRLRLSSLGQVTTGHLVNLATTDVERFHWAAIFTNYIWLAPAETLVI 99
            +GW+Y+  VV+G +L+ F+HH +FF     GM LR+++  ++Y K LRL  ++LG+ TTG +VNL + DV RF  +AIF +YIW+ P +TL++
Sbjct:  131 DGWIYSTGVVMGSLLYIFTHHPYFFGVQHGGMTLRISSCTLIYRKALRLSKAALGKTTTGQMVNLLSNDVNRFDTSAIFLHYIWIGPLQTLIV 223          
BLAST of mRNA_H-paniculata_contig19324.4883.1 vs. uniprot
Match: A0A6H5JDL0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL0_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 1.620e-20
Identity = 44/66 (66.67%), Postives = 53/66 (80.30%), Query Frame = 0
Query:   36 LGMELRVATTAVLYDKILRLRLSSLGQVTTGHLVNLATTDVERFHWAAIFTNYIWLAPAETLVIAY 101
            LGM+LR++TT +LYDKILRLRLS LGQ++TGHLVNL TTDVE F     F NY+W AP ++LVI Y
Sbjct:    2 LGMQLRISTTTILYDKILRLRLSLLGQISTGHLVNLTTTDVEAFQKGGTFVNYLWGAPIQSLVILY 67          
BLAST of mRNA_H-paniculata_contig19324.4883.1 vs. uniprot
Match: UPI001E676A9E (ATP-binding cassette sub-family C member 4-like isoform X1 n=7 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E676A9E)

HSP 1 Score: 93.2 bits (230), Expect = 5.630e-20
Identity = 41/93 (44.09%), Postives = 65/93 (69.89%), Query Frame = 0
Query:    7 EGWVYALCVVLGGVLFSFSHHLHFFQTWILGMELRVATTAVLYDKILRLRLSSLGQVTTGHLVNLATTDVERFHWAAIFTNYIWLAPAETLVI 99
            +GW+++  VV+G VL+ FSHH  FF     GM++RVA+ A++Y K LRL  ++LG+ T G +VNL + DV RF  + IF +Y+W+ P +T+++
Sbjct:  140 DGWLFSTGVVMGSVLYIFSHHPFFFGIQHSGMQIRVASCAMIYRKALRLSKAALGKTTVGQMVNLLSNDVNRFDTSVIFIHYLWIGPLQTMIV 232          
BLAST of mRNA_H-paniculata_contig19324.4883.1 vs. uniprot
Match: A0A8J5N746_HOMAM (Cystic fibrosis transmembrane conductance regulator n=8 Tax=Homarus americanus TaxID=6706 RepID=A0A8J5N746_HOMAM)

HSP 1 Score: 90.5 bits (223), Expect = 4.970e-19
Identity = 38/92 (41.30%), Postives = 65/92 (70.65%), Query Frame = 0
Query:    8 GWVYALCVVLGGVLFSFSHHLHFFQTWILGMELRVATTAVLYDKILRLRLSSLGQVTTGHLVNLATTDVERFHWAAIFTNYIWLAPAETLVI 99
            GW+Y+  VV+G +L+ FSHH +F+   + GM++RVA+ +++Y K LRL   +LG+ T G ++NL + DV RF  + IF +Y+W+ P +T+++
Sbjct:  109 GWLYSTGVVMGSILYIFSHHPYFWGVQLSGMQIRVASCSMIYRKALRLSKVALGKTTIGQMINLLSNDVNRFDASFIFLHYLWIGPLQTMIV 200          
BLAST of mRNA_H-paniculata_contig19324.4883.1 vs. uniprot
Match: UPI001FB6EA1C (ATP-binding cassette sub-family C member 4-like isoform X3 n=15 Tax=Penaeus TaxID=133894 RepID=UPI001FB6EA1C)

HSP 1 Score: 89.7 bits (221), Expect = 9.270e-19
Identity = 40/93 (43.01%), Postives = 64/93 (68.82%), Query Frame = 0
Query:    7 EGWVYALCVVLGGVLFSFSHHLHFFQTWILGMELRVATTAVLYDKILRLRLSSLGQVTTGHLVNLATTDVERFHWAAIFTNYIWLAPAETLVI 99
            +GW++A  VV+G +L+ FSHH  F+     GM++RVA+ A++Y K LRL  ++LG+ T G +VNL + DV RF  + IF +Y+W+ P +T ++
Sbjct:  160 DGWLFATGVVMGSLLYIFSHHPFFWGIQHSGMQIRVASCALIYRKALRLSKAALGKTTIGQMVNLLSNDVNRFDTSVIFIHYLWIGPLQTAIV 252          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19324.4883.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSW6_ECTSI8.600e-3867.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LSW3_ECTSI3.320e-3363.37Multidrug resistance-associated protein-like prote... [more]
D8LSW4_ECTSI3.510e-3159.41Multidrug resistance-associated protein-like prote... [more]
A0A835YMC7_9STRA2.530e-2153.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J5CN58_CHIOP6.360e-2143.43Multidrug resistance-associated protein 4 n=1 Tax=... [more]
A0A0P4VXN7_SCYOL8.700e-2145.16Uncharacterized protein n=8 Tax=Portunidae TaxID=6... [more]
A0A6H5JDL0_9PHAE1.620e-2066.67ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
UPI001E676A9E5.630e-2044.09ATP-binding cassette sub-family C member 4-like is... [more]
A0A8J5N746_HOMAM4.970e-1941.30Cystic fibrosis transmembrane conductance regulato... [more]
UPI001FB6EA1C9.270e-1943.01ATP-binding cassette sub-family C member 4-like is... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011527ABC transporter type 1, transmembrane domainPFAMPF00664ABC_membranecoord: 7..100
e-value: 2.2E-7
score: 30.8
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 1..101
score: 11.68
IPR030244Oligomycin resistance ATP-dependent permease Yor1PANTHERPTHR24223:SF271LD28489P-RELATEDcoord: 5..100
NoneNo IPR availablePANTHERPTHR24223FAMILY NOT NAMEDcoord: 5..100
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..101
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availableTMHMMTMhelixcoord: 9..31
IPR036640ABC transporter type 1, transmembrane domain superfamilySUPERFAMILY90123ABC transporter transmembrane regioncoord: 5..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19324contigH-paniculata_contig19324:1944..4671 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19324.4883.1mRNA_H-paniculata_contig19324.4883.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19324 1944..4673 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19324.4883.1 ID=prot_H-paniculata_contig19324.4883.1|Name=mRNA_H-paniculata_contig19324.4883.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=101bp
DNAESWEGWVYALCVVLGGVLFSFSHHLHFFQTWILGMELRVATTAVLYD
KILRLRLSSLGQVTTGHLVNLATTDVERFHWAAIFTNYIWLAPAETLVIA
Y
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011527ABC1_TM_dom
IPR030244Yor1
IPR036640ABC1_TM_sf