prot_H-paniculata_contig1931.4880.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1931.4880.1
Unique Nameprot_H-paniculata_contig1931.4880.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length228
Homology
BLAST of mRNA_H-paniculata_contig1931.4880.1 vs. uniprot
Match: D8LIG5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIG5_ECTSI)

HSP 1 Score: 189 bits (480), Expect = 7.870e-57
Identity = 96/151 (63.58%), Postives = 120/151 (79.47%), Query Frame = 0
Query:    4 TTVLSVIALTCSCASAFTVSPSIRNVRSQASTRSSARCTTM-MG--SREDSFIPSETWFGEYMGEQGLRYALNKTPQEIDSEGDYTLIEKLFGQTSNNKKRMELKKEVLAKADIPTNPEQYKSWTAKYGYGRFFPVYVDKSGNGDDSPAPA 151
            T  LS++ALTCSCA+AFTVSP+    +++  + ++   T++ MG   +E  FIPSE W GEY+GEQGLRY ++KT +E+  EGDYTL+EK+FGQTSNN +RM+LK EVLAKADIPTNP  YK+WT KYGYGRFFPVYVDKSG  DD+PAPA
Sbjct:    3 TAALSLVALTCSCANAFTVSPAALRTQARGRSNTATSSTSLRMGWSLKEADFIPSEEWLGEYLGEQGLRYRMDKTEKEVAEEGDYTLLEKIFGQTSNNAERMKLKAEVLAKADIPTNPSLYKTWTEKYGYGRFFPVYVDKSGLSDDTPAPA 153          
BLAST of mRNA_H-paniculata_contig1931.4880.1 vs. uniprot
Match: A0A7S2V2P5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2P5_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.110e-35
Identity = 60/100 (60.00%), Postives = 79/100 (79.00%), Query Frame = 0
Query:   45 MGSREDSFIPSETWFGEYMGEQGLRYALNKTPQEIDSEGDYTLIEKLFGQTSNNKKRMELKKEVLAKADIPT--NPEQYKSWTAKYGYGRFFPVYVDKSG 142
            +G  ++ F+PSETW  +Y+GE GLRYA+NKTPQE+++EGDY L+++LFGQTSNN  R+ELKK   AKA+  T    E+ +SW +K+GYGRFFP YVDKSG
Sbjct:   42 VGGSDEEFVPSETWLADYLGENGLRYAMNKTPQELETEGDYPLLDRLFGQTSNNGARLELKKVARAKANSLTAEQEEEKQSWLSKFGYGRFFPAYVDKSG 141          
BLAST of mRNA_H-paniculata_contig1931.4880.1 vs. uniprot
Match: A0A835YMI2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMI2_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.090e-27
Identity = 57/123 (46.34%), Postives = 73/123 (59.35%), Query Frame = 0
Query:   40 RCTTMM--GSREDSFIPSETWFGEYMGEQGLRYALNKTPQEIDSEGDYTLIEKLFGQTSNNKKRMELKKEVLAKADIPTNPEQYKSWTAKYGYGRFFPVYVDKSGNGDDSPAPATPQPQSMIA 160
            RCT  M    R D F+PSE +  +Y+G+ G+RY++ KTPQEI++EGDY   E +FGQTSNN  +MELKK+    A      E+ K W  KYGY R FP YVD SG      AP      + +A
Sbjct:   29 RCTASMKMALRPDDFVPSELFMQQYLGQDGIRYSMGKTPQEIETEGDYGFFEAIFGQTSNNAAKMELKKQARESAKKVLYTERAKEWLVKYGYPRAFPAYVDNSGEDAAESAPVVKAAMAAVA 151          
BLAST of mRNA_H-paniculata_contig1931.4880.1 vs. uniprot
Match: W7TTW2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTW2_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.650e-15
Identity = 42/92 (45.65%), Postives = 54/92 (58.70%), Query Frame = 0
Query:   53 IPSETWFGEYMGEQGLRYALNKTPQEIDSEGDYTLIEKLFGQTSNNKKRMELK---KEVLAKADIPTNPEQYKSWTAKYGYGRFFPVYVDKS 141
            I SE     Y+ E+G RY LNKTP+E++ EGDY + EK+FG TSNN  RM  +   + +   A       + K W AKYGY R+   YVDKS
Sbjct:  124 INSEANLASYLSEEGFRYCLNKTPEELEKEGDYNIFEKMFGATSNNAARMAARSFGRSLTIDAYDAKKAAENKEWVAKYGYKRWVTSYVDKS 215          
BLAST of mRNA_H-paniculata_contig1931.4880.1 vs. uniprot
Match: A0A4D9CTP3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTP3_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.150e-15
Identity = 41/92 (44.57%), Postives = 53/92 (57.61%), Query Frame = 0
Query:   53 IPSETWFGEYMGEQGLRYALNKTPQEIDSEGDYTLIEKLFGQTSNNKKRMELK---KEVLAKADIPTNPEQYKSWTAKYGYGRFFPVYVDKS 141
            I SE     Y+ E+G RY  NKTP+E++ EGDY + EK+FG TSNN  RM  +   + +   A       + K W AKYGY R+   YVDKS
Sbjct:   48 INSEANLASYLSEEGFRYCFNKTPEELEKEGDYNIFEKMFGATSNNAARMAARSFGRSLTIDAYDAKKAAENKEWVAKYGYKRWVTSYVDKS 139          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1931.4880.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LIG5_ECTSI7.870e-5763.58Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2V2P5_9STRA1.110e-3560.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835YMI2_9STRA1.090e-2746.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TTW2_9STRA1.650e-1545.65Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A4D9CTP3_9STRA2.150e-1544.57Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..227
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..16
score: 5.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.797

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1931contigH-paniculata_contig1931:7265..14893 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1931.4880.1mRNA_H-paniculata_contig1931.4880.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1931 6415..14956 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1931.4880.1 ID=prot_H-paniculata_contig1931.4880.1|Name=mRNA_H-paniculata_contig1931.4880.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=228bp
MKTTTVLSVIALTCSCASAFTVSPSIRNVRSQASTRSSARCTTMMGSRED
SFIPSETWFGEYMGEQGLRYALNKTPQEIDSEGDYTLIEKLFGQTSNNKK
RMELKKEVLAKADIPTNPEQYKSWTAKYGYGRFFPVYVDKSGNGDDSPAP
ATPQPQSMIAAAPKAQATPAAPVAKKASSVKVMAKKAPAPKAAAAPKVAP
KPKPAPKKVAPVKPKPMGNMNNLPKAL*
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