prot_H-paniculata_contig19306.4877.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19306.4877.1
Unique Nameprot_H-paniculata_contig19306.4877.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length393
Homology
BLAST of mRNA_H-paniculata_contig19306.4877.1 vs. uniprot
Match: D7FLW2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLW2_ECTSI)

HSP 1 Score: 329 bits (843), Expect = 2.150e-102
Identity = 221/431 (51.28%), Postives = 256/431 (59.40%), Query Frame = 0
Query:    1 VSHILWSRTGGRVSYLADLCRSLIGVDRRGAGGGASVVSGGVGGFGEVGEDGTWRLRLNEFAHVLKLASMVPVGVEGELQRRLDELPYTARQESVVLRAVCVCMVGGVGETDLLLDLLTNVAPFKEYWAAVVAQHSSPVST------RXXXXXXXXXRRSSCNAGINSSPC---SPASDIISPPPIGGSAKG-----------------------YPEAEAGEGKDEECRGRARSDVVHRLDGDGAERRGGIVQEEGRRGAGEDRGILLVVLVVLLLLHVSFRFLSDKGTSPLV------VCSDFDKAVG----PSSGRSALMAILAVLEAGGFLRVSNEGKKVICDDLMLVDQVYASMPFKLRKSLHKAAAKWLSDRHRSSFRDRADVMPVLISHLTQAHEEARAQAMLAVLKVCTFCFGVESWLLCHTR 389
            VSHILW+RT GRVSYLADLCRSL G  R  AG G+S   GG   FGEVGEDGTWRLRLNEFAHVLKLAS VP GVEG LQRRLDELPY ARQ  VVLR VCV +V GVGE DLLL LLTNVAPFKEYW AVV+QH S  +T      R         RRS   + +N+SP    +PA+D  S    G SA                           +AEA   +      ++   V    +   A     +  E G  GA +DR      +        S      + T+P          S  DK+ G    P +G  AL + LA+LEAGGFLR+   GK  +CDD+ML+DQVYAS PFKLRKSLHK AA+W+SDRHR  FRDRADVMP+LI+HLTQAHEEARAQAMLAVLKV    F ++ W+L H R
Sbjct:  188 VSHILWARTRGRVSYLADLCRSLTGTSRGAAGSGSS---GGTS-FGEVGEDGTWRLRLNEFAHVLKLASRVPAGVEGALQRRLDELPYNARQ--VVLRVVCVTVVAGVGEIDLLLHLLTNVAPFKEYWKAVVSQHESGEATTRRRSSRSRRGTGTPPRRSLTLSPVNTSPSVASTPATDAAS---TGASAVARAAVERRDIARGGXXXXXXXXXXXXDAEAAPPEAAIATRQSPPRVQSMSEAAAAAMTEFLRDEAGAAGAEQDRKRTRSDVPGRPTARDSGGDAGLRTTTPASPATARRAASAIDKSAGVDSEPGAGEEALRSCLAMLEAGGFLRLCEGGKTFVCDDMMLMDQVYASTPFKLRKSLHKEAAQWISDRHRRDFRDRADVMPMLINHLTQAHEEARAQAMLAVLKVLGGRF-LDRWVLEHVR 608          
BLAST of mRNA_H-paniculata_contig19306.4877.1 vs. uniprot
Match: A0A6H5KFZ7_9PHAE (Guanylate cyclase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFZ7_9PHAE)

HSP 1 Score: 327 bits (839), Expect = 2.080e-97
Identity = 221/417 (53.00%), Postives = 250/417 (59.95%), Query Frame = 0
Query:    1 VSHILWSRTGGRVSYLADLCRSLIGVDRRGAGGGASVVSGGVGG--FGEVGEDGTWRLRLNEFAHVLKLASMVPVGVEGELQRRLDELPYTARQESVVLRAVCVCMVGGVGETDLLLDLLTNVAPFKEYWAAVVAQHSS---PV---STRXXXXXXXXXRRSSCNAGINSSPC---SPASDIISPPPIGGSAKGYPEA-----------------------EAGEGKDEECRGRARSDVVHRLDGDGAERRGGIVQEEGRRGAGEDRGILLVVLVVLLLLHVSFRFLSDKGTSPLV------VCSDFDKAVG----PSSGRSALMAILAVLEAGGFLRVSNEGKKVICDDLMLVDQVYASMPFKLRKSLHKAAAKWLSDRHRSSFRDRADVMPVLISHLTQAHEEARAQAMLAVLKV 373
            VSHILW+RT GRVSYLADLCRSL G  R    G A+  SG  GG  FGEVGEDGTWRLRLNEFAHVLKLAS VP GVEG LQRRLDELPYTARQ  VVLR VCV +V GVGE DLLL LLTNVAPFKEYW AVV+QH S   P    S+R         RRS   + +N+SP    +PA+D  S       A+G  E                        EA     E    ++R  V    +   A     +  E G  GA +DR      +   L    S      + TSP          S  DK+ G    P +G  AL   LA+LEAGGFLR+   GK  +CDD+ML+DQVYAS PFKLRKSLHK AA+W+SDRHR  FRDRADVMP+LI+HLTQAHEEARAQAMLAVLKV
Sbjct: 1145 VSHILWARTRGRVSYLADLCRSLTGTSR----GAAAAGSGSSGGTSFGEVGEDGTWRLRLNEFAHVLKLASRVPAGVEGALQRRLDELPYTARQ--VVLRVVCVTVVAGVGEMDLLLHLLTNVAPFKEYWKAVVSQHESGEAPTRRRSSRFRRRTGTPPRRSLTLSPVNTSPSVARTPATDAASTL-ASAVARGAIERRDILRGGXXXXXXXXXXXXXXXXEAAPPTAEISTRQSRPRVQSMSEAAAAAMTEFLRDEAGAAGAEQDRKRTRSDVPGRLTARDSGGDAGLRTTSPSSPATARRATSAIDKSAGAHSEPGAGEEALRTCLAMLEAGGFLRLCEGGKTFVCDDMMLMDQVYASTPFKLRKSLHKEAAQWISDRHRRDFRDRADVMPMLINHLTQAHEEARAQAMLAVLKV 1554          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19306.4877.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLW2_ECTSI2.150e-10251.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFZ7_9PHAE2.080e-9753.00Guanylate cyclase domain-containing protein n=1 Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 274..293
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 294..392
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..234
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 235..254
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 255..273

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19306contigH-paniculata_contig19306:850..4452 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19306.4877.1mRNA_H-paniculata_contig19306.4877.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19306 850..4452 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19306.4877.1 ID=prot_H-paniculata_contig19306.4877.1|Name=mRNA_H-paniculata_contig19306.4877.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=393bp
VSHILWSRTGGRVSYLADLCRSLIGVDRRGAGGGASVVSGGVGGFGEVGE
DGTWRLRLNEFAHVLKLASMVPVGVEGELQRRLDELPYTARQESVVLRAV
CVCMVGGVGETDLLLDLLTNVAPFKEYWAAVVAQHSSPVSTRRRRRRSVP
PRRSSCNAGINSSPCSPASDIISPPPIGGSAKGYPEAEAGEGKDEECRGR
ARSDVVHRLDGDGAERRGGIVQEEGRRGAGEDRGILLVVLVVLLLLHVSF
RFLSDKGTSPLVVCSDFDKAVGPSSGRSALMAILAVLEAGGFLRVSNEGK
KVICDDLMLVDQVYASMPFKLRKSLHKAAAKWLSDRHRSSFRDRADVMPV
LISHLTQAHEEARAQAMLAVLKVCTFCFGVESWLLCHTRYCR*
back to top