mRNA_H-paniculata_contig19293.4870.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig19293.4870.1
Unique NamemRNA_H-paniculata_contig19293.4870.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig19293.4870.1 vs. uniprot
Match: A0A6H5LN90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN90_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 2.240e-71
Identity = 126/212 (59.43%), Postives = 151/212 (71.23%), Query Frame = 3
Query:  171 SFVTSSSKYALLRMLFGVMSTPWLFQRMMSVVLGHVVPDSGLLRYIDCISCLSPTFEENLKSIKLMFAA----GLTLKTPKIQFGPKEVNYIEHVISVDGISGSIDRDNAISNLPLPKFIKELRSILSIVNFVRRFIEKYAKVTAPLVALTTKVQAAEGNFQKAWGPAQDVTFALIKHAMPSATVLKFPGFSREFVVHTDASEAGAGAFLAQ 794
            +FVT + KY   RM FGV + PWLFQ +MS+ LGH+ PDSG+L Y+D + C++ TFE +L S++ MFAA    GLTLK  KIQFG KEV+Y+ HVIS  GIS S DR +AI NLP P  IK+LRS+L +VNFVRR I+ YA VTAPLV LT K      +F+KAWG AQD  F  +K  + S  VL FP FSREFVVHTDASE G GAFLAQ
Sbjct:   40 AFVTPTGKYCFKRMPFGVANAPWLFQHVMSLALGHLGPDSGVLSYMDDLICINHTFEAHLSSLEKMFAALQAAGLTLKPSKIQFGQKEVDYLGHVISAKGISVSTDRIDAIRNLPTPTCIKDLRSVLGMVNFVRRAIKDYADVTAPLVELTRKDYVKRASFKKAWGSAQDAAFENVKRVLSSTPVLHFPDFSREFVVHTDASEQGVGAFLAQ 251          
BLAST of mRNA_H-paniculata_contig19293.4870.1 vs. uniprot
Match: A0A6H5K047_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K047_9PHAE)

HSP 1 Score: 232 bits (592), Expect = 1.240e-70
Identity = 124/212 (58.49%), Postives = 151/212 (71.23%), Query Frame = 3
Query:  171 SFVTSSSKYALLRMLFGVMSTPWLFQRMMSVVLGHVVPDSGLLRYIDCISCLSPTFEENLKSIKLMFAA----GLTLKTPKIQFGPKEVNYIEHVISVDGISGSIDRDNAISNLPLPKFIKELRSILSIVNFVRRFIEKYAKVTAPLVALTTKVQAAEGNFQKAWGPAQDVTFALIKHAMPSATVLKFPGFSREFVVHTDASEAGAGAFLAQ 794
            +FVT + KY   RM FGV + PWLFQ +MS+ LGH+ PDSG+L Y+D + C++ TF+ +L SI+ MFAA    GLTLK  KIQFG KEV+Y+ HVIS  GIS S DR +AI +L  PK IK+LRSIL + NFVRRF++ YA +TAPLV LT K       F++AWGP QD  F  +K A+ SA VL FP FSREFVVHTDASE G GAF AQ
Sbjct:   75 AFVTHNGKYCFKRMPFGVANAPWLFQHVMSIALGHLGPDSGVLSYMDDLICINRTFKTHLVSIEKMFAALQAAGLTLKPSKIQFGRKEVDYLGHVISAKGISVSTDRIDAIRDLSTPKCIKDLRSILGMANFVRRFVKNYADLTAPLVDLTRKDFVKPRKFREAWGPDQDAAFQQLKDALSSAPVLHFPDFSREFVVHTDASELGVGAFPAQ 286          
BLAST of mRNA_H-paniculata_contig19293.4870.1 vs. uniprot
Match: A0A6H5JHS5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHS5_9PHAE)

HSP 1 Score: 231 bits (588), Expect = 2.820e-70
Identity = 124/212 (58.49%), Postives = 149/212 (70.28%), Query Frame = 3
Query:  171 SFVTSSSKYALLRMLFGVMSTPWLFQRMMSVVLGHVVPDSGLLRYIDCISCLSPTFEENLKSIKLMFAA----GLTLKTPKIQFGPKEVNYIEHVISVDGISGSIDRDNAISNLPLPKFIKELRSILSIVNFVRRFIEKYAKVTAPLVALTTKVQAAEGNFQKAWGPAQDVTFALIKHAMPSATVLKFPGFSREFVVHTDASEAGAGAFLAQ 794
            +FVT + KY   RM FGV + PWLFQ +MS+ LGH+ PDSG+L Y+D + C++ TFE +L  I+ MFAA    GLTLK  KIQFG KEV+Y+ HVIS  GIS S DR +AI +L  PK IK+ RSIL + NFVRRF + YA +TAPLV LT K       F++AWGP QD  F  +K A+ SA VL FP FSREFVVHTDASE G GAFLAQ
Sbjct:  132 AFVTHNGKYCFKRMPFGVANAPWLFQHVMSIALGHLGPDSGVLSYMDDLICINRTFETHLVPIEKMFAALQAAGLTLKPSKIQFGRKEVDYLGHVISAKGISVSTDRIDAIRDLSTPKCIKDFRSILGMANFVRRFAKNYADLTAPLVDLTRKDFVKPRKFREAWGPDQDAAFQQLKDALYSALVLHFPDFSREFVVHTDASELGVGAFLAQ 343          
BLAST of mRNA_H-paniculata_contig19293.4870.1 vs. uniprot
Match: A0A6H5JGF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGF6_9PHAE)

HSP 1 Score: 230 bits (587), Expect = 4.230e-66
Identity = 124/212 (58.49%), Postives = 150/212 (70.75%), Query Frame = 3
Query:  171 SFVTSSSKYALLRMLFGVMSTPWLFQRMMSVVLGHVVPDSGLLRYIDCISCLSPTFEENLKSIKLMFAA----GLTLKTPKIQFGPKEVNYIEHVISVDGISGSIDRDNAISNLPLPKFIKELRSILSIVNFVRRFIEKYAKVTAPLVALTTKVQAAEGNFQKAWGPAQDVTFALIKHAMPSATVLKFPGFSREFVVHTDASEAGAGAFLAQ 794
            +FVT + KY   RM FGV + PWLFQ +MS+ LGH+ PDSG+L Y+D + C++ TFE +L SI+ MFAA    GLTLK  KIQFG KEV+Y+ HVIS  GI  S DR +AI ++  PK IK+LRSIL + NFVRRF + YA +TAPLV LT K       F++AWGP QD  F  +K A+ SA VL FP FSREFVVHTDASE G GAFLAQ
Sbjct:  132 AFVTHNGKYCFKRMPFGVANAPWLFQHVMSIALGHLGPDSGVLLYMDNLICINRTFETHLVSIEKMFAALQAAGLTLKPSKIQFGRKEVDYLGHVISAKGIFVSTDRIDAIRDVSTPKCIKDLRSILGMANFVRRFAKNYADLTAPLVDLTRKDFVKPRKFREAWGPDQDAAFQQLKDALYSALVLHFPDFSREFVVHTDASELGVGAFLAQ 343          
BLAST of mRNA_H-paniculata_contig19293.4870.1 vs. uniprot
Match: A0A6H5K3U6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3U6_9PHAE)

HSP 1 Score: 218 bits (556), Expect = 2.000e-63
Identity = 119/212 (56.13%), Postives = 148/212 (69.81%), Query Frame = 3
Query:  171 SFVTSSSKYALLRMLFGVMSTPWLFQRMMSVVLGHVVPDSGLLRYIDCISCLSPTFEENLKSIKLMFAA----GLTLKTPKIQFGPKEVNYIEHVISVDGISGSIDRDNAISNLPLPKFIKELRSILSIVNFVRRFIEKYAKVTAPLVALTTKVQAAEGNFQKAWGPAQDVTFALIKHAMPSATVLKFPGFSREFVVHTDASEAGAGAFLAQ 794
            +FVT + KY   RM FGV + PWLFQ +MS+ LGH+ PDSG+L Y+D + C++ TFE +L SI+ MFAA    GL+LK  KIQFG KEV+Y+ HVIS  GIS S D  +AI +L  PK IK+LRSIL + NFV  F++KYA +TAPLV LT K       F++A GP QD  F  +K+A+ SA +  FP FSREFVVHTDAS  G GAFLAQ
Sbjct:  132 AFVTHNGKYCFKRMPFGVANAPWLFQHVMSIALGHLGPDSGVLSYMDDLICINRTFETHLVSIEKMFAALQAAGLSLKPSKIQFGRKEVDYLGHVISAKGISVSTDHMDAIRDLSTPKCIKDLRSILGMANFVLCFVKKYADLTAPLVDLTRKDFVKPRKFREARGPDQDAAFQQLKNALSSAPLQYFPDFSREFVVHTDASALGVGAFLAQ 343          
BLAST of mRNA_H-paniculata_contig19293.4870.1 vs. uniprot
Match: A0A6H5KCT5_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT5_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 2.570e-63
Identity = 114/212 (53.77%), Postives = 142/212 (66.98%), Query Frame = 3
Query:  171 SFVTSSSKYALLRMLFGVMSTPWLFQRMMSVVLGHVVPDSGLLRYIDCISCLSPTFEENLKSIKLMF----AAGLTLKTPKIQFGPKEVNYIEHVISVDGISGSIDRDNAISNLPLPKFIKELRSILSIVNFVRRFIEKYAKVTAPLVALTTKVQAAEGNFQKAWGPAQDVTFALIKHAMPSATVLKFPGFSREFVVHTDASEAGAGAFLAQ 794
            +FVT+S KY   RM FGV + PW+F  M    LGH+ P+  LL Y+D    LS TFE ++KS++ MF    AAGLTLK  KI FGPK + Y+ H+IS +GIS   DR  A+ NLP P+ +K+LRS+L +VNFVRRFI  YA++T PLV LT K  A +  F KAW  + D +FA +K  + SA VL FP F REFVVH DASE G GAFLAQ
Sbjct:  196 AFVTNSGKYCYKRMPFGVCNAPWIFTEMAHKTLGHI-PE--LLIYMDDFCVLSATFENHMKSLESMFVALQAAGLTLKPSKISFGPKSIEYLGHIISAEGISVGKDRIKAVQNLPTPRCLKDLRSVLGVVNFVRRFIPDYAEITNPLVELTRKEYATKSRFVKAWNKSHDASFAHLKRLLTSAPVLHFPDFDREFVVHVDASEHGCGAFLAQ 404          
BLAST of mRNA_H-paniculata_contig19293.4870.1 vs. uniprot
Match: A0A6H5K153_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K153_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 3.650e-61
Identity = 114/212 (53.77%), Postives = 142/212 (66.98%), Query Frame = 3
Query:  171 SFVTSSSKYALLRMLFGVMSTPWLFQRMMSVVLGHVVPDSGLLRYIDCISCLSPTFEENLKSIKLMF----AAGLTLKTPKIQFGPKEVNYIEHVISVDGISGSIDRDNAISNLPLPKFIKELRSILSIVNFVRRFIEKYAKVTAPLVALTTKVQAAEGNFQKAWGPAQDVTFALIKHAMPSATVLKFPGFSREFVVHTDASEAGAGAFLAQ 794
            +FVT+S KY   RM FGV + PW+F  M    LGH+ P+  LL Y+D    LS TFE ++KS++ MF    AAGLTLK  KI FGPK + Y+ H+IS +GIS   DR  A+ NLP P+ +K+LRS+L +VNFVRRFI  YA++T PLV LT K  A +  F KAW  + D +FA +K  + SA VL FP F REFVVH DASE G GAFLAQ
Sbjct:  219 AFVTNSGKYCYKRMPFGVCNAPWIFTEMAHKTLGHI-PE--LLIYMDDFCVLSATFENHMKSLESMFVALQAAGLTLKPSKISFGPKSIEYLGHIISAEGISVGKDRIKAVQNLPTPRCLKDLRSVLGVVNFVRRFIPDYAEITNPLVELTRKEYATKSRFVKAWNKSHDASFAHLKRLLTSAPVLHFPDFDREFVVHVDASEHGCGAFLAQ 427          
BLAST of mRNA_H-paniculata_contig19293.4870.1 vs. uniprot
Match: A0A6H5JGV3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGV3_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 3.340e-59
Identity = 108/191 (56.54%), Postives = 133/191 (69.63%), Query Frame = 3
Query:  171 SFVTSSSKYALLRMLFGVMSTPWLFQRMMSVVLGHVVPDSGLLRYIDCISCLSPTFEENLKSIKLMFAA----GLTLKTPKIQFGPKEVNYIEHVISVDGISGSIDRDNAISNLPLPKFIKELRSILSIVNFVRRFIEKYAKVTAPLVALTTKVQAAEGNFQKAWGPAQDVTFALIKHAMPSATVLKFPGF 731
            +FVT + KY   RM FGV + PWLFQ +MS+ LGH+ PDSG+L Y+D + C++ TFE +L S++ MFAA    GLTLK  KIQFG KEV+Y+ HVIS  GIS S DR +AI NLP P  IK+LRS+L +VNFVRRFI+ YA VTAPLV LT K      +F+KAWG AQD  F  +K  + S  VL FP F
Sbjct:  283 AFVTPTGKYCFKRMPFGVANAPWLFQHVMSLALGHLGPDSGVLSYMDDLICINHTFEAHLSSLEKMFAALQAAGLTLKPSKIQFGQKEVDYLGHVISAKGISVSTDRIDAIRNLPTPTCIKDLRSVLGMVNFVRRFIKDYADVTAPLVELTRKDYVKRASFKKAWGSAQDAAFENVKRVLSSTPVLHFPDF 473          
BLAST of mRNA_H-paniculata_contig19293.4870.1 vs. uniprot
Match: A0A6H5KB46_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB46_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 7.480e-59
Identity = 113/213 (53.05%), Postives = 138/213 (64.79%), Query Frame = 3
Query:  171 SFVTSSSKYALLRMLFGVMSTPWLFQRMMSVVLGHVVPDSGLLRYIDCISCLSPTFEENLKSIKLMF----AAGLTLKTPKIQFGPKEVNYIEHVISVDGISGSIDRDNAISNLPLPKFIKELRSILSIVNFVRRFIEKYAKVTAPLVALTTKVQAAEGNFQKAWGPAQDVTFA-LIKHAMPSATVLKFPGFSREFVVHTDASEAGAGAFLAQ 794
            +FVT+S KY   RM FGV + PW F  M    LGH+ P+  LL Y+D    LS TFE ++ S+K MF    AAGLTLK  KI FG K + Y+ H+IS +GIS   DR  A+ NLP  + +K+LRS+L +VNFVRRFI  YA++T PLV LT K  A +  F KAW  + D +FA L K  + SA VL FP F REFVVH DASE G GAFLAQ
Sbjct:   74 AFVTNSGKYCYKRMPFGVCNAPWNFSEMAHKTLGHI-PE--LLIYMDDFCVLSATFENHMTSLKGMFVALQAAGLTLKPSKISFGLKSIEYLGHIISAEGISVGKDRIKAVQNLPTTRCLKDLRSVLGVVNFVRRFIPDYAEITNPLVELTRKEYATKSRFVKAWNKSHDASFAHLKKRLLTSAPVLHFPDFDREFVVHVDASEHGCGAFLAQ 283          
BLAST of mRNA_H-paniculata_contig19293.4870.1 vs. uniprot
Match: A0A6H5L7Z2_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Z2_9PHAE)

HSP 1 Score: 195 bits (495), Expect = 5.740e-58
Identity = 107/212 (50.47%), Postives = 138/212 (65.09%), Query Frame = 3
Query:  171 SFVTSSSKYALLRMLFGVMSTPWLFQRMMSVVLGHVVPDSGLLRYIDCISCLSPTFEENLKSIKLMF----AAGLTLKTPKIQFGPKEVNYIEHVISVDGISGSIDRDNAISNLPLPKFIKELRSILSIVNFVRRFIEKYAKVTAPLVALTTKVQAAEGNFQKAWGPAQDVTFALIKHAMPSATVLKFPGFSREFVVHTDASEAGAGAFLAQ 794
            +FVT + K+   R+ FG+ + P+LFQR M++   H  P SGLL Y+D + C S T+E +LK ++  F    AAGLTLK  K+QFGP+EV Y+ H+ S DGI    DR  AI ++P P  IKELRS+L  VN+VR+FI   A VTAPLV LT K   A  +  K WGP  D  FA +K  + +A +L FP FS+EFV+H DAS AG GAFLAQ
Sbjct:   40 AFVTRNGKWVFKRLPFGIANAPFLFQRTMALAFAHFGPKSGLLVYMDDLICCSSTWEGHLKLLENTFQALQAAGLTLKPSKVQFGPQEVKYLGHIPSSDGIRLGEDRIKAILDIPTPTNIKELRSVLGTVNYVRKFIPNLATVTAPLVDLTKK--EAMKSVAKRWGPEHDEAFAEVKKLLAAAPLLNFPDFSKEFVIHVDASNAGTGAFLAQ 249          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19293.4870.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LN90_9PHAE2.240e-7159.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K047_9PHAE1.240e-7058.49Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JHS5_9PHAE2.820e-7058.49Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JGF6_9PHAE4.230e-6658.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3U6_9PHAE2.000e-6356.13Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KCT5_9PHAE2.570e-6353.77Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K153_9PHAE3.650e-6153.77Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JGV3_9PHAE3.340e-5956.54Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KB46_9PHAE7.480e-5953.05Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L7Z2_9PHAE5.740e-5850.47Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19293contigH-paniculata_contig19293:4009..4802 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score118.6
Seed ortholog evalue3.2e-24
Seed eggNOG ortholog7668.SPU_016982-tr
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.retrotransposable element Tf2 155 kDa protein type 1-like
EggNOG OGs38F42@33154,COG2801@1,KOG0017@2759
COG Functional cat.G
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
Exons1
Model size794
Cds size585
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929471.4998753-CDS-H-paniculata_contig19293:4008..45931622929471.4998753-CDS-H-paniculata_contig19293:4008..4593Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19293 4009..4593 -
1691480876.0961564-CDS-H-paniculata_contig19293:4008..45931691480876.0961564-CDS-H-paniculata_contig19293:4008..4593Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19293 4009..4593 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929471.5239668-UTR-H-paniculata_contig19293:4593..48021622929471.5239668-UTR-H-paniculata_contig19293:4593..4802Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig19293 4594..4802 -
1691480876.1086667-UTR-H-paniculata_contig19293:4593..48021691480876.1086667-UTR-H-paniculata_contig19293:4593..4802Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig19293 4594..4802 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19293.4870.1prot_H-paniculata_contig19293.4870.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig19293 4009..4593 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig19293.4870.1

>prot_H-paniculata_contig19293.4870.1 ID=prot_H-paniculata_contig19293.4870.1|Name=mRNA_H-paniculata_contig19293.4870.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=195bp
MLFGVMSTPWLFQRMMSVVLGHVVPDSGLLRYIDCISCLSPTFEENLKSI
KLMFAAGLTLKTPKIQFGPKEVNYIEHVISVDGISGSIDRDNAISNLPLP
KFIKELRSILSIVNFVRRFIEKYAKVTAPLVALTTKVQAAEGNFQKAWGP
AQDVTFALIKHAMPSATVLKFPGFSREFVVHTDASEAGAGAFLAQ
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mRNA from alignment at H-paniculata_contig19293:4009..4802-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig19293.4870.1 ID=mRNA_H-paniculata_contig19293.4870.1|Name=mRNA_H-paniculata_contig19293.4870.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=794bp|location=Sequence derived from alignment at H-paniculata_contig19293:4009..4802- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGTGTTGATTATAGAAGTACGTTAAACCGTCACCTCATCCACAAGAGCCG GCCTCTCCCCAACATGGACACCCGCCTCGACTCCGTCGGCGGCGCTGCTT TGATCACCGTAGCCGTCATCATGAGCGTTTTCTTGCAACTACCTGTAGCT AAGGTGGACGTGGACAAGGCAGCTTCGTAACCTCTTCTAGCAAATATGCG TTATTGCGTATGCTTTTCGGTGTTATGTCCACACCATGGCTATTTCAGCG CATGATGTCTGTTGTCCTTGGCCACGTCGTTCCGGATTCGGGGCTCTTGC GATATATCGATTGCATTTCATGTCTCAGTCCAACCTTTGAAGAGAACCTG AAATCCATCAAACTCATGTTCGCCGCCGGCTTAACCCTCAAAACGCCTAA AATCCAGTTTGGTCCCAAGGAAGTCAATTACATCGAGCATGTCATTTCAG TGGATGGAATTTCAGGCAGCATTGACCGCGATAATGCTATTAGTAATTTG CCTCTTCCAAAGTTTATCAAAGAGCTCCGCTCCATTCTGAGTATAGTCAA TTTCGTGCGTCGTTTTATTGAAAAGTATGCCAAAGTTACCGCACCCCTCG TCGCGCTCACCACGAAAGTGCAGGCCGCCGAAGGAAACTTTCAAAAGGCG TGGGGTCCGGCTCAAGATGTCACTTTCGCTCTCATTAAACACGCCATGCC GTCTGCCACTGTCTTGAAGTTTCCTGGTTTTTCTCGTGAATTCGTAGTAC ACACTGATGCCTCCGAAGCAGGAGCCGGCGCATTCCTTGCGCAA
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Coding sequence (CDS) from alignment at H-paniculata_contig19293:4009..4802-

>mRNA_H-paniculata_contig19293.4870.1 ID=mRNA_H-paniculata_contig19293.4870.1|Name=mRNA_H-paniculata_contig19293.4870.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1170bp|location=Sequence derived from alignment at H-paniculata_contig19293:4009..4802- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTTTTCGGTGTTATGTCCACACCATGGCTATTTCAGCGCATGATGTC
TGTTGTCCTTGGCCACGTCGTTCCGGATTCGGGGCTCTTGCGATATATCG
ATTGCATTTCATGTCTCAGTCCAACCTTTGAAGAGAACCTGAAATCCATC
AAACTCATGTTCGCCGCCGGCTTAACCCTCAAAACGCCTAAAATCCAGTT
TGGTCCCAAGGAAGTCAATTACATCGAGCATGTCATTTCAGTGGATGGAA
TTTCAGGCAGCATTGACCGCGATAATGCTATTAGTAATTTGCCTCTTCCA
AAGTTTATCAAAGAGCTCCGCTCCATTCTGAGTATAGTCAATTTCGTGCG
TCGTTTTATTGAAAAGTATGCCAAAGTTACCGCACCCCTCGTCGCGCTCA
CCACGAAAGTGCAGGCCGCCGAAGGAAACTTTCAAAAGGCGTGGGGTCCG
GCTCAAGATGTCACTTTCGCTCTCATTAAACACGCCATGCCGTCTGCCAC
TGTCTTGAAGTTTCCTGGTTTTTCTCGTGAATTCGTAGTACACACTGATG
CCTCCGAAGCAGGAGCCGGCGCATTCCTTGCGCAAATGCTTTTCGGTGTT
ATGTCCACACCATGGCTATTTCAGCGCATGATGTCTGTTGTCCTTGGCCA
CGTCGTTCCGGATTCGGGGCTCTTGCGATATATCGATTGCATTTCATGTC
TCAGTCCAACCTTTGAAGAGAACCTGAAATCCATCAAACTCATGTTCGCC
GCCGGCTTAACCCTCAAAACGCCTAAAATCCAGTTTGGTCCCAAGGAAGT
CAATTACATCGAGCATGTCATTTCAGTGGATGGAATTTCAGGCAGCATTG
ACCGCGATAATGCTATTAGTAATTTGCCTCTTCCAAAGTTTATCAAAGAG
CTCCGCTCCATTCTGAGTATAGTCAATTTCGTGCGTCGTTTTATTGAAAA
GTATGCCAAAGTTACCGCACCCCTCGTCGCGCTCACCACGAAAGTGCAGG
CCGCCGAAGGAAACTTTCAAAAGGCGTGGGGTCCGGCTCAAGATGTCACT
TTCGCTCTCATTAAACACGCCATGCCGTCTGCCACTGTCTTGAAGTTTCC
TGGTTTTTCTCGTGAATTCGTAGTACACACTGATGCCTCCGAAGCAGGAG
CCGGCGCATTCCTTGCGCAA
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