prot_H-paniculata_contig1929.4868.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1929.4868.1
Unique Nameprot_H-paniculata_contig1929.4868.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length232
Homology
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BLAST of mRNA_H-paniculata_contig1929.4868.1 vs. uniprot
Match: A0A7S2GQ05_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GQ05_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.820e-9
Identity = 34/89 (38.20%), Postives = 52/89 (58.43%), Query Frame = 0 
Query:   79 RSLGGWWLGMFFIFLVNVFWATSSVLVQRIADDMDYDQPVVITYIGACLLSCFIPIHVILVLLGWTRNPSLLDQDHRVLPGEAVYTELE 167
            +  G W +G+ F+ L+ V WA +SVLVQ I +++DY+QP V+TYI   L + +IP ++ + L G  +NP L     R   G     E+E
Sbjct:    2 KKSGRWAVGLLFLVLIAVIWAGASVLVQYIYEELDYEQPFVLTYICNSLFAIYIPGYLAISLFGCVKNPPLRGHGPREGCGFCCTKEVE 90
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BLAST of mRNA_H-paniculata_contig1929.4868.1 vs. uniprot
Match: A0A7S2E5E0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E5E0_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.770e-6
Identity = 29/74 (39.19%), Postives = 43/74 (58.11%), Query Frame = 0 
Query:   76 PASRSLGGWWLGMFFIFLVNVFWATSSVLVQRIADDMDYDQPVVITYIGACLLSCFIPIHVILVLLGWTRNPSL 149
            P+S  L    LG+FFI +V++ W  +SV+VQ + +D+D+D P V+ YIG  L S  +P  +I     W R   L
Sbjct:    4 PSSSYL----LGLFFIVIVSIIWTVASVIVQHLYNDLDFDSPFVLVYIGTSLFSILLPFRLI-----WERRLQL 68
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BLAST of mRNA_H-paniculata_contig1929.4868.1 vs. uniprot
Match: A0A1Z5JF87_FISSO (Solute carrier family 35, member F5 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JF87_FISSO)

HSP 1 Score: 56.2 bits (134), Expect = 1.190e-5
Identity = 26/64 (40.62%), Postives = 41/64 (64.06%), Query Frame = 0 
Query:   76 PASRSLGGWWLGMFFIFLVNVFWATSSVLVQRI-ADDMDYDQPVVITYIGACLLSCFIPIHVIL 138
            P +     + LG+FFI LV + W  SS+LVQ + ++D+ +D P ++TYIG  L S ++P H +L
Sbjct:    5 PTAHVSAAYSLGLFFIVLVALIWTASSILVQYLYSEDVSFDSPFLLTYIGVSLFSLWLPTHSLL 68
[Close]
BLAST of mRNA_H-paniculata_contig1929.4868.1 vs. uniprot
Match: A0A1Z5KN43_FISSO (Solute carrier family 35, member F5 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KN43_FISSO)

HSP 1 Score: 55.5 bits (132), Expect = 2.150e-5
Identity = 25/55 (45.45%), Postives = 38/55 (69.09%), Query Frame = 0 
Query:   82 GGWWLGMFFIFLVNVFWATSSVLVQRI-ADDMDYDQPVVITYIGACLLSCFIPIH 135
            G + LG+FFI LV + W  SS+LVQ + ++D+ +D P ++TYIG  L S ++P H
Sbjct:    9 GAYSLGLFFIVLVALIWTASSILVQYLYSEDVSFDSPFLLTYIGVSLFSLWLPTH 63
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1929.4868.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7S2GQ05_9STRA1.820e-938.20Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2E5E0_9STRA1.770e-639.19Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1Z5JF87_FISSO1.190e-540.63Solute carrier family 35, member F5 n=1 Tax=Fistul... [more]
A0A1Z5KN43_FISSO2.150e-545.45Solute carrier family 35, member F5 n=1 Tax=Fistul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23051SOLUTE CARRIER FAMILY 35, MEMBER F5coord: 78..138
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..99
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 119..143
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 100..118
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 144..231
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..80
NoneNo IPR availableTMHMMTMhelixcoord: 38..60
NoneNo IPR availableTMHMMTMhelixcoord: 118..140
NoneNo IPR availableTMHMMTMhelixcoord: 83..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1929contigH-paniculata_contig1929:5488..16299 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1929.4868.1mRNA_H-paniculata_contig1929.4868.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1929 4980..16347 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1929.4868.1 ID=prot_H-paniculata_contig1929.4868.1|Name=mRNA_H-paniculata_contig1929.4868.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=232bp
MSHRNDDGGQFSTPHSRSTEVVPATANRDGIIYFSNHPGASIAIASAAAG
AAINTVGLATEHEQFDDEKWNDGGSPASRSLGGWWLGMFFIFLVNVFWAT
SSVLVQRIADDMDYDQPVVITYIGACLLSCFIPIHVILVLLGWTRNPSLL
DQDHRVLPGEAVYTELESNGISTFSASPRGADRGASTGDRRGAGNAVSIM
TVAVSPDGGAANSTRATNVVSSECVLIRGVS*
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