prot_H-paniculata_contig19288.4866.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19288.4866.1
Unique Nameprot_H-paniculata_contig19288.4866.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length105
Homology
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BLAST of mRNA_H-paniculata_contig19288.4866.1 vs. uniprot
Match: A0A183R1W1_9TREM (Uncharacterized protein n=1 Tax=Schistosoma rodhaini TaxID=6188 RepID=A0A183R1W1_9TREM)

HSP 1 Score: 51.6 bits (122), Expect = 5.430e-6
Identity = 28/70 (40.00%), Postives = 38/70 (54.29%), Query Frame = 0 
Query:   30 WVRYFSNLLNTKTANMDPTIVDQVDQQPEFARVADEPTIDEIKFVLRRTVNGKAVEPDELPTELSKFGVR 99
            WV YF  LLN   ++  P I       P  A     PTI+E+K  +R+T NGKAV PD +P+E  K  ++
Sbjct:   44 WVEYFEELLNRPDSSNSPDIEAAHTDLPISATP---PTIEEVKMAIRQTKNGKAVGPDNIPSEALKSDIK 110
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19288.4866.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A183R1W1_9TREM5.430e-640.00Uncharacterized protein n=1 Tax=Schistosoma rodhai... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19288contigH-paniculata_contig19288:4210..4524 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19288.4866.1mRNA_H-paniculata_contig19288.4866.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19288 4210..4524 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19288.4866.1 ID=prot_H-paniculata_contig19288.4866.1|Name=mRNA_H-paniculata_contig19288.4866.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=105bp
LEKKRPCTSQYVMDELGNLVENKSLILKHWVRYFSNLLNTKTANMDPTIV
DQVDQQPEFARVADEPTIDEIKFVLRRTVNGKAVEPDELPTELSKFGVRE
EPIL*
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