prot_H-paniculata_contig19285.4864.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19285.4864.1
Unique Nameprot_H-paniculata_contig19285.4864.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length315
Homology
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BLAST of mRNA_H-paniculata_contig19285.4864.1 vs. uniprot
Match: A0A6H5KY95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY95_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 1.380e-55
Identity = 101/164 (61.59%), Postives = 125/164 (76.22%), Query Frame = 0 
Query:  153 PEGTSGDGPVGEGGVTAVFGEVLQGEKSLEALFSDDWSGMQANTGMVKSKVKLPDISEFVPKKRLEAETLEQRQKKTAVGLTVGKGSPEKE--LPSSKLT-LDSKLSPLVDREEEAYQKRVAERFEEGPVVKALKTATWFAICALVVWEVYINSPFFSTPPPPP 313
            P   SG G   EGGV    G+VL+G++S+EALF+DDWSGM ANTGM KS V LPDISEF P +R E+ TLEQR+KK+AVGL VG G  + +  +P+S+L   +SKL+P+VDREEE  QK  AERFEEGP+V+ LKTATWF+IC LV+WE+YINSP+F  P  PP
Sbjct:  138 PAADSGAGAGAEGGV-GELGDVLEGDRSVEALFTDDWSGMPANTGMTKSNVPLPDISEFKPSRRAES-TLEQREKKSAVGLVVGAGDGDDDDAVPASRLAGFESKLTPIVDREEERRQKNAAERFEEGPIVRGLKTATWFSICTLVLWEIYINSPWFHAPESPP 299
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BLAST of mRNA_H-paniculata_contig19285.4864.1 vs. uniprot
Match: D8LB46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB46_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 8.620e-54
Identity = 94/148 (63.51%), Postives = 116/148 (78.38%), Query Frame = 0 
Query:  171 FGEVLQGEKSLEALFSDDWSGMQANTGMVKSKVKLPDISEFVPKKRLEAETLEQRQKKTAVGLTVGKGSPEKE----LPSSKLT-LDSKLSPLVDREEEAYQKRVAERFEEGPVVKALKTATWFAICALVVWEVYINSPFFSTPPPPP 313
             G+VL+G++S+EALFSDDWSGM ANTGM KS V LPDISEF P +R E+ TLEQR+KK+AVGL VG G    +    +P+S+L   +SKL+P+VDREEE  +K  AERFEEGP+V+ LKTATWF+IC LV+WEVYINSP+F  P  PP
Sbjct:   60 LGDVLEGDRSVEALFSDDWSGMPANTGMTKSNVPLPDISEFKPSRRAES-TLEQREKKSAVGLVVGPGDGSDDDGDAVPASRLAGFESKLTPIVDREEEWRKKNAAERFEEGPIVRGLKTATWFSICTLVLWEVYINSPWFHAPESPP 206
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19285.4864.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KY95_9PHAE1.380e-5561.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB46_ECTSI8.620e-5463.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 36..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 23..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..40
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..314

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19285contigH-paniculata_contig19285:706..3618 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19285.4864.1mRNA_H-paniculata_contig19285.4864.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19285 696..3958 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19285.4864.1 ID=prot_H-paniculata_contig19285.4864.1|Name=mRNA_H-paniculata_contig19285.4864.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=315bp
MFVYTEAPRFVFATRDTMHSTRALLAVTAVIACLLRSADGFVVPLNKILL
GPRHHGSSETTRTHDDHHHHHRHNGYASTTATATTLLRLRPHSRSTTSNH
VLMATGDKKRRRRKGTPATSPAEDSAKAAPAAAAAAASTPSKASAKKDGG
ASPEGTSGDGPVGEGGVTAVFGEVLQGEKSLEALFSDDWSGMQANTGMVK
SKVKLPDISEFVPKKRLEAETLEQRQKKTAVGLTVGKGSPEKELPSSKLT
LDSKLSPLVDREEEAYQKRVAERFEEGPVVKALKTATWFAICALVVWEVY
INSPFFSTPPPPPI*
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