mRNA_H-paniculata_contig1926.4857.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig1926.4857.1 vs. uniprot
Match: D7G2X9_ECTSI (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X9_ECTSI) HSP 1 Score: 199 bits (506), Expect = 6.380e-56 Identity = 119/204 (58.33%), Postives = 135/204 (66.18%), Query Frame = 1
Query: 1 RFVARSDLTRLKRYQIDRVFHAGGPGPSGQAK------EMWEADFDIVAS--ESSPATGVGGNLPFGVD---------------DVRGGRI-------GADSFEVAEAEAVLVVSQVMGTFGSYLGPWFLRLGNVKMSQAILELCHVPQEARSMVTALLGKLARGSLTPAEAWLEVEEKGILSVEALFSIRPFLHNMGKDPLEA 522
RFVARS +TRLKRYQIDR+F AGG G S E WEADFDI++S SS A G GVD D RG R G FEVAEAEAVLV+SQVMGTF +LGPWFLRLG+VKMSQAILELC VPQ+ R +VT LLGKLARGS+TPA+A+ EV KG LS E L ++RPFLH+MGK+P EA
Sbjct: 1011 RFVARSGVTRLKRYQIDRIFLAGGAGESDDPSSDRSCVEAWEADFDIISSGHSSSAAAASYGGAGRGVDGNSGITARLPTSLGGDGRGVRAALGHHDSGEGRFEVAEAEAVLVISQVMGTFEGFLGPWFLRLGHVKMSQAILELCGVPQDVRPIVTGLLGKLARGSITPAKAFSEVGSKG-LSEETLLNVRPFLHHMGKEPFEA 1213
BLAST of mRNA_H-paniculata_contig1926.4857.1 vs. uniprot
Match: A0A6H5KJV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJV9_9PHAE) HSP 1 Score: 121 bits (303), Expect = 9.680e-29 Identity = 91/204 (44.61%), Postives = 104/204 (50.98%), Query Frame = 1
Query: 1 RFVARSDLTRLKRYQIDRVFHAGGPGPSGQAK------EMWEADFDIVASESSPAT----------GVGGN------LPFGVD-DVRGGRI-------GADSFEVAEAEAVLVVSQVMGTFGSYLGPWFLRLGNVKMSQAILELCHVPQEARSMVTALLGKLARGSLTPAEAWLEVEEKGILSVEALFSIRPFLHNMGKDPLEA 522
RFVARS +TRLKRYQIDR+F AGG G S E WEADFDI++S S + GV GN LP +D D RG R G FEVAEAEAVLV+SQV G LLGKLARGS+T A+A+ EV KG LS E L ++RPFLH+MGKDP EA
Sbjct: 161 RFVARSGVTRLKRYQIDRIFLAGGAGESNDHSSDRSCVEAWEADFDIISSGHSSSAAAASYWGASRGVDGNSGITARLPTSLDGDGRGVRAALGHHDSGEGRFEVAEAEAVLVISQVTG--------------------------------------LLGKLARGSMTAAKAFSEVGSKG-LSEETLLNVRPFLHHMGKDPFEA 325
BLAST of mRNA_H-paniculata_contig1926.4857.1 vs. uniprot
Match: A0A812PR07_9DINO (Non-specific serine/threonine protein kinase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812PR07_9DINO) HSP 1 Score: 72.4 bits (176), Expect = 1.310e-11 Identity = 52/150 (34.67%), Postives = 78/150 (52.00%), Query Frame = 1
Query: 1 RFVARSDLTRLKRYQIDRVFH--AGGPGPSGQAKEMWEADFDIVAS--ESSPATGVGGNLP-----------FGVDDVRGGR--IGADSFEVAEAEAVLVVSQVMGTFGSYLGPWFLRLGNVKMSQAILELCHVPQEARSMVTALLGKLA 399
R+VAR +++ LKRY R +H + G +G E+ EADFDIV S P + GNL +DD+ GR +GA S AEAE + V ++VM + G +G +FLR+ N+K+++ ++ VP + R V L A
Sbjct: 1115 RYVARHNVSDLKRYVSSRTYHNSSANSGGTGPPSELQEADFDIVVSARRGGPRSVRLGNLAPAPEAVPVDIFSAIDDLDPGRAALGAAS---AEAETLCVAAEVMQSLGPAVGKYFLRISNMKIARGAMDFAAVPLKLRHAVCRLFSAAA 1261
BLAST of mRNA_H-paniculata_contig1926.4857.1 vs. uniprot
Match: A0A4D9D4I1_9STRA (Non-specific serine/threonine protein kinase n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4I1_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 9.530e-10 Identity = 49/144 (34.03%), Postives = 68/144 (47.22%), Query Frame = 1
Query: 1 RFVARSDLTRLKRYQIDRVFHAGGPGPSGQAKEMWEADFDIVASES-SPATGVGGNLPFGVDDVRGGRIGADSFEVAEAEAVLVVSQVM-GTFGSYLGPWFLRLGNVKMSQAILELCHVPQEARSMVTALLGKLARGSLTPAEA 426
R+VAR++++ LKRY++ R FH G +G +E W A DIV + +P G E+ EAE V QV+ G G P+ LRL + + Q LEL VP EAR V LL + G+L +A
Sbjct: 839 RYVARTEVSHLKRYEVSRTFHGPDQG-AGHPQEEWAAQLDIVCDDRHTPGQG----------------------EILEAEVVWTAGQVVEGIAGR---PYVLRLNSAPLLQGTLELLDVPLEARKPVLNLLEAVCMGALAHPKA 956
BLAST of mRNA_H-paniculata_contig1926.4857.1 vs. uniprot
Match: A0A7S1TX62_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TX62_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 7.240e-9 Identity = 48/142 (33.80%), Postives = 65/142 (45.77%), Query Frame = 1
Query: 1 RFVARSDLTRLKRYQIDRVFHAG-----GPGPSGQAK-EMWEADFDIVASESSPATGVGGNLPFGVDDVRGGRIGADSFEVAEAEAVLVVSQVMGTFGSYLGPWFLRLGNVKMSQAILELCHVPQEARSMVTALLGKLARGS 408
R AR +++ LKRYQI RVF+ G G G S E EADFDI+ P EV EAE VLV +VM ++ G L++ N+KM+ A+LEL + + A+ LL A G+
Sbjct: 424 RMAARGNISNLKRYQIGRVFYRGLRRGVGGGDSRHVPVEAVEADFDILQDADPVDAAASFMTP----------------EVCEAETVLVALRVMHALDAFTGASVLKVNNIKMTAALLELMGLSKAAKPHARRLLAAQAAGA 549
BLAST of mRNA_H-paniculata_contig1926.4857.1 vs. uniprot
Match: A0A397BY33_9STRA (Non-specific serine/threonine protein kinase (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BY33_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 4.500e-8 Identity = 53/177 (29.94%), Postives = 83/177 (46.89%), Query Frame = 1
Query: 1 RFVARSDLTRLKRYQIDRVFHAGGPGPSGQAKEMWEADFDIVASESSPATGVGGNLPFGVDDVRGGRIGADSFEVAEAEAVLVVSQVMGTFGSYLGPWFLRLGNVKMSQAILELCHVPQEARSMVTALLGKLARGSLTPAEAWLEVEEKGI---LSVEALFSIRPFLHNMGKDPLEA 522
RF+AR+++++LKR+ RVF G G +E++EADFD+V D+ GR V E E + VV Q + + G LG ++RL + ++S+ +L+LC VP R V L + + P W V K +S + ++ F H + DPL A
Sbjct: 52 RFLARNNVSQLKRFHFGRVFRKNVSG--GHPREIFEADFDLVW-----------------DEKHTGR-------VMELEVLHVVRQSLESVG-LLGTSYVRLSDARLSRGMLDLCDVPLATRRDVLKWLSQESNLPSVPTSRWKFVVRKMADVSISDASCDLLKHFFH-LPPDPLAA 200
BLAST of mRNA_H-paniculata_contig1926.4857.1 vs. uniprot
Match: A0A3R6ZKA4_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6ZKA4_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 4.850e-8 Identity = 53/177 (29.94%), Postives = 83/177 (46.89%), Query Frame = 1
Query: 1 RFVARSDLTRLKRYQIDRVFHAGGPGPSGQAKEMWEADFDIVASESSPATGVGGNLPFGVDDVRGGRIGADSFEVAEAEAVLVVSQVMGTFGSYLGPWFLRLGNVKMSQAILELCHVPQEARSMVTALLGKLARGSLTPAEAWLEVEEKGI---LSVEALFSIRPFLHNMGKDPLEA 522
RF+AR+++++LKR+ RVF G G +E++EADFD+V D+ GR V E E + VV Q + + G LG ++RL + ++S+ +L+LC VP R V L + + P W V K +S + ++ F H + DPL A
Sbjct: 437 RFLARNNVSQLKRFHFGRVFRKNVSG--GHPREIFEADFDLVW-----------------DEKHTGR-------VMELEVLHVVRQSLESVG-LLGTSYVRLSDARLSRGMLDLCDVPLATRRDVLKWLSQESNLPSVPTSRWKFVVRKMADVSISDASCDLLKHFFH-LPPDPLAA 585
BLAST of mRNA_H-paniculata_contig1926.4857.1 vs. uniprot
Match: A0A3R6XVS2_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6XVS2_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 4.860e-8 Identity = 53/177 (29.94%), Postives = 83/177 (46.89%), Query Frame = 1
Query: 1 RFVARSDLTRLKRYQIDRVFHAGGPGPSGQAKEMWEADFDIVASESSPATGVGGNLPFGVDDVRGGRIGADSFEVAEAEAVLVVSQVMGTFGSYLGPWFLRLGNVKMSQAILELCHVPQEARSMVTALLGKLARGSLTPAEAWLEVEEKGI---LSVEALFSIRPFLHNMGKDPLEA 522
RF+AR+++++LKR+ RVF G G +E++EADFD+V D+ GR V E E + VV Q + + G LG ++RL + ++S+ +L+LC VP R V L + + P W V K +S + ++ F H + DPL A
Sbjct: 442 RFLARNNVSQLKRFHFGRVFRKNVSG--GHPREIFEADFDLVW-----------------DEKHTGR-------VMELEVLHVVRQSLESVG-LLGTSYVRLSDARLSRGMLDLCDVPLATRRDVLKWLSQESNLPSVPTSRWKFVVRKMADVSISDASCDLLKHFFH-LPPDPLAA 590
BLAST of mRNA_H-paniculata_contig1926.4857.1 vs. uniprot
Match: A0A024U8N7_9STRA (Non-specific serine/threonine protein kinase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U8N7_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 5.020e-8 Identity = 46/149 (30.87%), Postives = 71/149 (47.65%), Query Frame = 1
Query: 1 RFVARSDLTRLKRYQIDRVFHAGGPGPSGQAKEMWEADFDIVASESSPATGVGGNLPFGVDDVRGGRIGADSFEVAEAEAVLVVSQVMGTFGSYLGPWFLRLGNVKMSQAILELCHVPQEARSMVTALLGKLARGSLTPAEAWLEVEEK 447
RF+AR+++T+LKR+ RVF G G +E++EADFD+V D+ GRI E E + VV Q + + G L F+RL + ++S+ +L++C VP +R V L + + P W V K
Sbjct: 847 RFLARNNVTQLKRFHFGRVFRKSVSG--GHPREIFEADFDLVW-----------------DEKHTGRI-------MELEVLNVVRQSLDSLG-LLATSFVRLSDARLSRGMLDICDVPLASRRDVLKWLSQESNLPSVPTSRWKFVVRK 968
BLAST of mRNA_H-paniculata_contig1926.4857.1 vs. uniprot
Match: A0A396ZUY0_9STRA (Non-specific serine/threonine protein kinase n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A396ZUY0_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 5.030e-8 Identity = 53/177 (29.94%), Postives = 83/177 (46.89%), Query Frame = 1
Query: 1 RFVARSDLTRLKRYQIDRVFHAGGPGPSGQAKEMWEADFDIVASESSPATGVGGNLPFGVDDVRGGRIGADSFEVAEAEAVLVVSQVMGTFGSYLGPWFLRLGNVKMSQAILELCHVPQEARSMVTALLGKLARGSLTPAEAWLEVEEKGI---LSVEALFSIRPFLHNMGKDPLEA 522
RF+AR+++++LKR+ RVF G G +E++EADFD+V D+ GR V E E + VV Q + + G LG ++RL + ++S+ +L+LC VP R V L + + P W V K +S + ++ F H + DPL A
Sbjct: 886 RFLARNNVSQLKRFHFGRVFRKNVSG--GHPREIFEADFDLVW-----------------DEKHTGR-------VMELEVLHVVRQSLESVG-LLGTSYVRLSDARLSRGMLDLCDVPLATRRDVLKWLSQESNLPSVPTSRWKFVVRKMADVSISDASCDLLKHFFH-LPPDPLAA 1034 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1926.4857.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1926.4857.1 >prot_H-paniculata_contig1926.4857.1 ID=prot_H-paniculata_contig1926.4857.1|Name=mRNA_H-paniculata_contig1926.4857.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=174bp RFVARSDLTRLKRYQIDRVFHAGGPGPSGQAKEMWEADFDIVASESSPATback to top mRNA from alignment at H-paniculata_contig1926:1392..5864+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1926.4857.1 ID=mRNA_H-paniculata_contig1926.4857.1|Name=mRNA_H-paniculata_contig1926.4857.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4473bp|location=Sequence derived from alignment at H-paniculata_contig1926:1392..5864+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1926:1392..5864+ >mRNA_H-paniculata_contig1926.4857.1 ID=mRNA_H-paniculata_contig1926.4857.1|Name=mRNA_H-paniculata_contig1926.4857.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1044bp|location=Sequence derived from alignment at H-paniculata_contig1926:1392..5864+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |