mRNA_H-paniculata_contig1921.4841.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1921.4841.1 vs. uniprot
Match: D8LD53_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD53_ECTSI) HSP 1 Score: 213 bits (541), Expect = 5.420e-59 Identity = 107/207 (51.69%), Postives = 135/207 (65.22%), Query Frame = 1
Query: 1234 GGVAEENPNDAWVQCDTCKKWRRLPDYVDADSLPLKWHCSMNTYDVARSTCSAKQEQSTGPRLVSSPNPQPKPAMDEE----------------EERIRDEHLRMYIRGWAKRLRAAEKTEAKLAPAMLTRHKRKVPDGEVHWVQCQSCGKWRSLLRSMDPSTFTGNGLLFFCLMNTWDEARSSCSAPQENQFDMDMLFPESPTPSR 1806
GG ++E WVQCDTCKKWRRLPD+VD D LPLKWHC MN YD AR+ C AKQE ST L + + E R +D +LR ++ GWA+R++ AEK ++KLAP+M TR KRK P + WV+CQ+CGKWR+LLR MD S F G+G F+CLMNTW+E+ +SCSAPQENQ+ +D LFP P P+R
Sbjct: 59 GGPSDEGV--VWVQCDTCKKWRRLPDFVDPDQLPLKWHCEMNIYDAARANCRAKQESSTATLLEAERKVRQXXXXXXXXXXXXXXXXXXXXXXXESRAKDANLRRFLSGWARRIKCAEKAKSKLAPSMSTRGKRKAPS-QAQWVRCQNCGKWRALLRCMDASLFLGHGQQFYCLMNTWNESLASCSAPQENQYTVDALFPP-PEPAR 261
BLAST of mRNA_H-paniculata_contig1921.4841.1 vs. uniprot
Match: A0A6H5K0G2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0G2_9PHAE) HSP 1 Score: 211 bits (538), Expect = 3.640e-57 Identity = 104/200 (52.00%), Postives = 132/200 (66.00%), Query Frame = 1
Query: 1234 GGVAEENPNDAWVQCDTCKKWRRLPDYVDADSLPLKWHCSMNTYDVARSTCSAKQEQSTGPRLVSSPNPQPKPAMDEE----------------EERIRDEHLRMYIRGWAKRLRAAEKTEAKLAPAMLTRHKRKVPDGEVHWVQCQSCGKWRSLLRSMDPSTFTGNGLLFFCLMNTWDEARSSCSAPQENQFDMDMLFP 1785
GG ++E WVQCDTCKKWRRLPD+VD D LPLKWHC MN YDVAR+ C AKQE ST L + + E R +D +LR ++ GWA+R++ AEK ++KLAP+M TR KRK P + WV+CQ+CGKWR+LLR MD S F G+G F+CLMNTW+E+ +SCSAPQENQ+ ++ LFP
Sbjct: 245 GGPSDEGV--VWVQCDTCKKWRRLPDFVDPDQLPLKWHCEMNIYDVARANCRAKQESSTATLLEAERKVRQXXXXXXXXXXXXXXXXXXXXXXXESRAKDANLRRFLSGWARRIKCAEKAKSKLAPSMSTRGKRKAPS-QAQWVRCQNCGKWRALLRCMDASLFLGHGQQFYCLMNTWNESLASCSAPQENQYTVEALFP 441
BLAST of mRNA_H-paniculata_contig1921.4841.1 vs. uniprot
Match: A0A7S2B7X4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B7X4_9STRA) HSP 1 Score: 129 bits (325), Expect = 5.030e-31 Identity = 69/164 (42.07%), Postives = 95/164 (57.93%), Query Frame = 1
Query: 1270 VQCDTCKKWRRLPDYVDADSLPLKWHCSMNTYDVARSTCSAKQEQSTGPRLVSSPNPQPKPAMDEEEERIRDEHLRMYIRGWAKRLRAAEKTEAKLAPAMLTRHKRKVPDGEVHWVQC--QSCGKWRSLLRSMDPSTFTGNGLLFFCLMNTWDEARSSCSAPQE 1755
VQCD C KWRRL DAD LP KW+C+MN D AR+ C+A +E+ T E+ DE L+ ++R W +RL+ + E +L + TR K++ P E ++QC +CGKWR+L RS+D T ++C+MNTWDEA +SCSAPQE
Sbjct: 1 VQCDKCTKWRRLHGVADADKLPKKWYCTMNN-DPARNNCNAPEEEET--------------------EKDPDERLKAHLRLWVRRLQCQDTAEVRLPTSSSTRGKKR-PLHEQEYIQCCDPNCGKWRALHRSLDSKTLAERAGAWYCVMNTWDEALASCSAPQE 142
BLAST of mRNA_H-paniculata_contig1921.4841.1 vs. uniprot
Match: A0A1Z5JR34_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JR34_FISSO) HSP 1 Score: 134 bits (338), Expect = 1.520e-30 Identity = 74/185 (40.00%), Postives = 98/185 (52.97%), Query Frame = 1
Query: 1213 VPRGASAGGVAEENPNDAWVQCDTCKKWRRLPDYVDADSLPLKWHCSMNTYDVARSTCSAKQEQSTGPRLVSSPNPQPKPAMDEEEERIRDEHLRMYIRGWAKRLRAAEKTEAKLAPAMLTRHKRKVPDGEVH-WVQC--QSCGKWRSLLRSMDPSTFTGNGLLFFCLMNTWDEARSSCSAPQEN 1758
V G S G + N WV+CD CKKWRRL VD LP KW+CSMN D R+ CSA +E+ P S D R + R W +RL+ E EA+ P + KR + + + W++C Q CGKWR+LL+SMD + G ++C+MNTWDE +SC+APQEN
Sbjct: 207 VRDGGSIFGQTTGSSNATWVECDKCKKWRRLRGVVDEKKLPSKWYCSMNKNDPERARCSAPEEEYETPHTPES---------------AADARTRRHFRVWVRRLQTNEAYEAR-QPLATRQKKRTLSSKDAYEWIRCCNQKCGKWRALLKSMDAKQYEGE---WYCVMNTWDEKMASCAAPQEN 372
BLAST of mRNA_H-paniculata_contig1921.4841.1 vs. uniprot
Match: A0A7S2VZJ1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VZJ1_9STRA) HSP 1 Score: 130 bits (328), Expect = 1.690e-28 Identity = 80/194 (41.24%), Postives = 105/194 (54.12%), Query Frame = 1
Query: 1204 ERTVPRGASAGGVAEENPNDAWVQCDTCKKWRRLPDYVDADSLPLKWHCSMNTYDVARSTCSAKQEQSTGPRLVSSPNPQPKPAMDEEEERIRDEHLRMYIRGWAKRLRAAEKTEAKLAPAMLTRHKRKV----PDGEVHWVQC--QSCGKWRSLLRSMDPSTF---TGNGLLFFCLMNTWDEARSSCSAPQEN 1758
E T G +AG + N WV+CD CKKWRRL VDA LP KW+CSMN D R+ C+A +E+ P S D+ R ++R W +RL+ + EA+L P M TR +K+ W++C SCGKWRSLLR MD S+ NG +FC++NTWDE +SC+APQEN
Sbjct: 314 EETSIFGQTAG-----SSNSTWVECDKCKKWRRLRGVVDARKLPSKWYCSMNKTDPERAKCTAPEEEYETPNTPESAT---------------DQRTRKHLRLWVRRLQCNDAYEARL-PTM-TRKMKKINATSAKDPYEWIRCCNPSCGKWRSLLRVMDASSVIESAKNGE-WFCVLNTWDEKTASCAAPQEN 484
BLAST of mRNA_H-paniculata_contig1921.4841.1 vs. uniprot
Match: B7FQW9_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQW9_PHATC) HSP 1 Score: 127 bits (319), Expect = 4.770e-28 Identity = 76/188 (40.43%), Postives = 96/188 (51.06%), Query Frame = 1
Query: 1222 GASAGGVAEENPNDAWVQCDTCKKWRRLPDYVDADSLPLKWHCSMNTYDVARSTCSAKQEQSTGPRLVSSPNPQPKPAMDEEEERIRDEHLRMYIRGWAKRLRAAEKTEAKLAPAMLTRHKRKVPDGE---VHWVQC--QSCGKWRSLLRSMDPSTF----TGNGLLFFCLMNTWDEARSSCSAPQEN 1758
G S G + N WV+CD CKKWRRL VD LP KW CSMN D RS CSA +E+ P S D R ++R W +RL++ E EA+ P + KR V WV+C SCGKWR++LR MD T T +G ++C+MN WDE +SC+APQEN
Sbjct: 202 GGSIFGQTTGSSNSTWVECDKCKKWRRLRGVVDEKKLPSKWFCSMNKNDPERSRCSAPEEEYEAPHTPES---------------AADARTRKHLRVWVRRLQSNEAYEAR-QPTLTRGKKRAVASSSKDPYEWVRCCNPSCGKWRAVLRIMDAKTNVIDRTTDGE-WYCVMNMWDEKTASCAAPQEN 372
BLAST of mRNA_H-paniculata_contig1921.4841.1 vs. uniprot
Match: A0A7S1ZHQ6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZHQ6_TRICV) HSP 1 Score: 127 bits (319), Expect = 2.190e-27 Identity = 74/175 (42.29%), Postives = 95/175 (54.29%), Query Frame = 1
Query: 1258 NDAWVQCDTCKKWRRLPDYVDADSLPLKWHCSMNTYDVARSTCSAKQEQSTGPRLVSSPNPQPKPAMDEEEERIRDEHLRMYIRGWAKRLRAAEKTEAKLAPAMLTRHKRKVPDGEV----HWVQC--QSCGKWRSLLRSMDPSTFTGN--GLLFFCLMNTWDEARSSCSAPQEN 1758
N WV+CD CKKWRRL VDA LP KW+C MN D R+ CSA +E+ P S D+ R ++R W +RL+ E EA+L P M TR KR+ WV+C SCGKWR+LLR MD T N ++C++NTWDE +SC+APQE+
Sbjct: 321 NATWVECDKCKKWRRLRGVVDAKKLPSKWYCHMNKNDPERAKCSAPEEEYETPNTPES---------------AADQRTRKHLRLWVRRLQCNEAYEARL-PTM-TRGKRRSATTSAKEPYEWVRCCNPSCGKWRALLRFMDAQTVMENCKNGEWYCVLNTWDEKTASCAAPQES 478
BLAST of mRNA_H-paniculata_contig1921.4841.1 vs. uniprot
Match: A0A7S4MKU7_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MKU7_9STRA) HSP 1 Score: 125 bits (314), Expect = 1.520e-26 Identity = 77/193 (39.90%), Postives = 102/193 (52.85%), Query Frame = 1
Query: 1216 PRGASAGGVAEENP---NDAWVQCDTCKKWRRLPDYVDADSLPLKWHCSMNTYDVARSTCSAKQEQSTGPRLVSSPNPQPKPAMDEEEERIRDEHLRMYIRGWAKRLRAAEKTEAKLAPAMLTRHKRKVPDGEV----HWVQC--QSCGKWRSLLRSMDPSTFTG---NGLLFFCLMNTWDEARSSCSAPQEN 1758
P G G + + N WV+CD CKKWRRL VDA LP KW+C MN D R+ CSA +E+ P S + D+ R ++R W +RL+ E E++L P M TR KR+ WV+C SCGKWR+LLR MD T NG ++C++NTWDE +SC+APQE+
Sbjct: 350 PAGEDEGSIFGQTTGASNATWVECDKCKKWRRLRGVVDAKKLPSKWYCHMNKNDPDRAKCSAPEEEYETPTTPESAS---------------DQRTRKHLRLWVRRLQCNEAYESRL-PTM-TRGKRRSATTSAKEPYEWVRCCNPSCGKWRALLRFMDAQTVVESCKNGE-WYCVLNTWDEKAASCAAPQES 524
BLAST of mRNA_H-paniculata_contig1921.4841.1 vs. uniprot
Match: A0A482SCH5_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SCH5_9ARCH) HSP 1 Score: 119 bits (299), Expect = 2.470e-26 Identity = 67/184 (36.41%), Postives = 96/184 (52.17%), Query Frame = 1
Query: 1267 WVQCDTCKKWRRLPDYVDADSLPLKWHCSMNTYDVARSTCSAKQEQSTGPRLVSSPNPQPKPAMDEEEERIRDEHLRMYIRGWAKRLRAAEKTEAKL-----APAMLTRHKRKVPDGEVHWVQCQ--SCGKWRSLLRSMDPSTFT--------------GNGLLFFCLMNTWDEARSSCSAPQE 1755
W QC+ C KWR LP VD +SLP W C MN YD +R+ C A +EQ E+EE H + Y+R W KR+R+A++ EA+L A K+K P E+ W++C SCGKWR++ R++D + G G +++C MN+WDE +SC+APQ+
Sbjct: 107 WAQCNNCDKWRSLPPTVDPNSLPDIWTCDMNIYDPSRANCDAPEEQY------------------EKEEDQATTHQKAYLRLWLKRMRSADRAEARLNIGNGRGAGANMMKKKKP--EIEWIRCSNPSCGKWRAISRNIDSNLLLSKLHKNRHFGEDEFGGGGVWYCSMNSWDETTASCAAPQD 270
BLAST of mRNA_H-paniculata_contig1921.4841.1 vs. uniprot
Match: A0A7S1YBM6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YBM6_9STRA) HSP 1 Score: 123 bits (309), Expect = 2.610e-26 Identity = 72/176 (40.91%), Postives = 89/176 (50.57%), Query Frame = 1
Query: 1258 NDAWVQCDTCKKWRRLPDYVDADSLPLKWHCSMNTYDVARSTCSAKQEQSTGPRLVSSPNPQPKPAMDEEEERIRDEHLRMYIRGWAKRLRAAEKTEAKLAPAMLTRHKRKVPDGE---VHWVQC--QSCGKWRSLLRSMDPSTFT----GNGLLFFCLMNTWDEARSSCSAPQEN 1758
N WV+CD CKKWRRL VD LP KW+CSMN D R+ CSA +E+ P S D R ++R W +RL + E E + P M KR WV+C SCGKWR+LLR MD NG ++C+MNTWDE +SC+APQEN
Sbjct: 278 NSTWVECDKCKKWRRLRGVVDEKKLPSKWYCSMNKNDPERARCSAPEEEYETPNTPES---------------AADARTRKHLRVWVRRLESQETFEGR-QPTMTRGKKRSTATTSKDPYEWVRCCNPSCGKWRALLRFMDAKQHVLERARNGE-WYCVMNTWDEKMASCAAPQEN 436 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1921.4841.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1921.4841.1 >prot_H-paniculata_contig1921.4841.1 ID=prot_H-paniculata_contig1921.4841.1|Name=mRNA_H-paniculata_contig1921.4841.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=664bp MAPSKKKSAKNSPKSHAAASGAAGTITGPDVDSPTGAAPAARAAAASASVback to top mRNA from alignment at H-paniculata_contig1921:11599..19183+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1921.4841.1 ID=mRNA_H-paniculata_contig1921.4841.1|Name=mRNA_H-paniculata_contig1921.4841.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7585bp|location=Sequence derived from alignment at H-paniculata_contig1921:11599..19183+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1921:11599..19183+ >mRNA_H-paniculata_contig1921.4841.1 ID=mRNA_H-paniculata_contig1921.4841.1|Name=mRNA_H-paniculata_contig1921.4841.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3984bp|location=Sequence derived from alignment at H-paniculata_contig1921:11599..19183+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |