mRNA_H-paniculata_contig1921.4840.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1921.4840.1 vs. uniprot
Match: A0A6H5K1R5_9PHAE (PNPLA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1R5_9PHAE) HSP 1 Score: 382 bits (981), Expect = 3.760e-129 Identity = 186/246 (75.61%), Postives = 213/246 (86.59%), Query Frame = 1
Query: 67 TLREWLSDGPFTLALSSSWFGLFCHAGVVCALVENGLAPARISGSSAGALVAVLWAMSMDTARLKEIMERAEERNPIVWASLLSRNMLPGVVNTHKSTRELLHRILEGAPVPDLEDLSIPVLVSAFDVTSMKPKVFSRGNATDALAASMAVPLLFKPVWAHGRPLLDGAVGDVAGVAGIDRAERTLYHHATYLPLWMTQHLSGFSNLVALKIGGLPYLNPWQLSGNGMKAFLRAKAATLRALDTPI 804
TLREWL GPF+LALSSSW GL+CHAGVVCALVE+GL+PA++SGSSAGALVAVLWA +M+T +L+E MERAE RNPI+WASL SRN+LPGVVN H+STRELL R LEG PDL+ ++PVLVSAFD T +K KVFS G A DALAASMAVP LFKPVW++GRPL+DGAVGDVAGV G++R+ER LYHHATYLPL +TQHL GF++LVALKI GLPYLNPWQL GNGM AF AK ATLRALDTP+
Sbjct: 5 TLREWLGKGPFSLALSSSWLGLWCHAGVVCALVESGLSPAKVSGSSAGALVAVLWAATMNTDKLQEAMERAEARNPIIWASLFSRNLLPGVVNIHRSTRELLDRTLEGQAAPDLDKSALPVLVSAFDATRLKTKVFSEGKAADALAASMAVPGLFKPVWSNGRPLIDGAVGDVAGVDGLERSERVLYHHATYLPLRLTQHLGGFTDLVALKINGLPYLNPWQLPGNGMDAFRLAKEATLRALDTPV 250
BLAST of mRNA_H-paniculata_contig1921.4840.1 vs. uniprot
Match: A0A7S3XKZ4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKZ4_HETAK) HSP 1 Score: 189 bits (481), Expect = 1.430e-53 Identity = 101/247 (40.89%), Postives = 151/247 (61.13%), Query Frame = 1
Query: 64 VTLREWLSDGPFTLALSSSWFGLFCHAGVVCALVENGLAPARISGSSAGALVAVLWAMSMDTARLKEIMERAEERNPIVWASLLSRNMLPGVVNTHKSTRELLHRILEGAPVPDLEDLSIPVLVSAFDVTSMKPKVFSRGNATDALAASMAVPLLFKPVWAHGRPLLDGAVGDVAGVAGIDRAERTLYHHATYLPLWMTQHLSGFSNLVALKIGGLPYLNPWQLSGNGMKAFLRAKAATLRALDTPI 804
+TLR+WLS+ PFTL LSSS+FG + H G++ AL+E GL P++++GSSAG ++AV +A + + + + R I+ L N PG+ N +K+++ ++ L PV E +P +SAFD+ +++ + F G+ A+AASM+VP +FKP + +G+P LDGA+ DVAG+AG+D+ ER LYHH T LP+ + F N LKI GLP+L+P S G + A AT AL I
Sbjct: 14 LTLRQWLSEKPFTLTLSSSFFGFYAHTGLLRALIEEGLEPSKLTGSSAGGMIAVAYAAGLSVEAITNQILKLR-REEILQLGTLMGNPWPGLFNVYKASQSVIRDFL---PVHSFEQCRLPAAISAFDIYNLRTQAFFSGDIVTAVAASMSVPFMFKPTFINGKPFLDGALFDVAGLAGVDKDERVLYHHCTALPV-SCSGIDAFRNSTTLKIEGLPFLDPATYSRRGAETIELAYVATKDALGQRI 255
BLAST of mRNA_H-paniculata_contig1921.4840.1 vs. uniprot
Match: A0A850BBZ6_9DELT (Patatin-like phospholipase family protein n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A850BBZ6_9DELT) HSP 1 Score: 167 bits (422), Expect = 1.120e-45 Identity = 101/260 (38.85%), Postives = 140/260 (53.85%), Query Frame = 1
Query: 67 TLREWLSDGPFTLALSSSWFGLFCHAGVVCALVENGLAPARISGSSAGALVAVLWAMSMDTARLKEIMERAEERNPIVWASLLSRNMLPGVVNTHKSTRELLHRILEGAPVPDLEDLSIPVLVSAFDVTSMKPKVFSRGNATDALAASMAVPLLFKPVWAHGRPLLDGAVGDVAGVAGIDRAERTLYHHATYLPLWMTQ-----HLSGFSNLVALKIGGLPYLNPWQLSGNGMKAFLRAKAATLRALDTPIARGAMVRSG 831
TLREWL + PF L LSS +FG F H GV+ L E GL PAR++GSSAGALVA WA + L++ + + + W +L G + R+ L +L P ++ PV +S +DV + +V + G A+ AS AVPLLF+P W GRPLLDG + D G+ GI +R YHH W + + +N+ +L +GGLP + P++L G AF A+ A ALD PIA G +VR+G
Sbjct: 6 TLREWLRERPFALGLSSGFFGFFAHTGVMTVLEEEGLLPARLAGSSAGALVAGAWAAGVSATDLRDELLALKREH--FWDPGFGLGLLRGEL-----FRQKLGALL---PAQTFDECRAPVAISVYDVLQARTRVLTAGRLVHAICASCAVPLLFQPAWVDGRPLLDGGILDRPGITGIPEGDRLFYHHLADRSPWRRKGSPSLEIPRRANMTSLVVGGLPRVGPFRLE-QGAAAFDAARKAAREALDRPIAEG-VVRAG 253
BLAST of mRNA_H-paniculata_contig1921.4840.1 vs. uniprot
Match: A0A813I6K8_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813I6K8_POLGL) HSP 1 Score: 166 bits (420), Expect = 1.330e-44 Identity = 95/249 (38.15%), Postives = 143/249 (57.43%), Query Frame = 1
Query: 67 TLREWLSDGPFTLALSSSWFGLFCHAGVVCALVENGLAPARISGSSAGALVAVLWAMSMDTARLKEIMERAEERNPIVWASLLSRNMLPG-VVNTHKSTRELLHRILEGAPVPDLEDLSIPVLVSAFDVTSMKPKVFSRGNATDALAASMAVPLLFKPVWAH-GRPLLDGAVGDVAGVAGIDRAERTLYHHATYLPLWMTQHLSGFSNLVALKIGGLPYLNPWQLSGNGMKAFLRAKAATLRALDTPIA 807
TL+EWL +GPFTL LSSS+FG + HAG++ AL+E G+ P+ ++GSS GA++A +WA + A++ ++ + P + PG + +T R L R+ + LED ++PV +S FDV S + +V G+ A+ AS+AVP F PV+ GRPLLDG + D+ G+ G+ ER LYHHA+ +P T + + + L+I LP++NP+ L G A AK AT L +A
Sbjct: 37 TLQEWLLEGPFTLVLSSSFFGFYAHAGLLTALLEAGVVPSAVAGSSGGAVIAAMWAAGLSVAQM---LDALQSLTPAELLQIARPWQEPGGIFSTEHVQRCLQSRLEKYRLCQRLEDCAVPVAISTFDVFSRQTRVLREGSIAFAITASLAVPFFFAPVYFEVGRPLLDGGIRDLPGLEGVSFGERVLYHHASIVPSCFTA-IGRYPESITLRIPHLPFVNPFTL-GQAQPALTTAKLATQAGLQEVLA 280
BLAST of mRNA_H-paniculata_contig1921.4840.1 vs. uniprot
Match: A0A0S8FKL7_9GAMM (PNPLA domain-containing protein n=1 Tax=Gammaproteobacteria bacterium SG8_31 TaxID=1703405 RepID=A0A0S8FKL7_9GAMM) HSP 1 Score: 160 bits (404), Expect = 6.290e-43 Identity = 97/252 (38.49%), Postives = 132/252 (52.38%), Query Frame = 1
Query: 64 VTLREWLSDGPFTLALSSSWFGLFCHAGVVCALVENGLAPARISGSSAGALVAVLWAMSMDTARLKEIMERAEERNPIVWASLLSRNMLPGVVNTHKSTRELLHRILEGAPVPDLEDLSIPVLVSAFDVTSMKPKVFSRGNATDALAASMAVPLLFKPVWAHGRPLLDGAVGDVAGVAGIDRAERTLYHHATYLPLWMTQHLSGFS-----NLVALKIGGLPYLNPWQLSGNGMKAFLRAKAATLRALDTPI 804
+TLR+WL PFTL +SS +F F H GV+ AL + L P +SGSSAGAL A LWA ++ ++E+ + + W +L G + R L+ R +PV LE P+ VS FD+ M+ +V S G+ AL AS AVPL+F P+W G L+DG +GD G++G+ R YHH Y W + + NL AL I LP P L G A+ A+ ATLRALD P+
Sbjct: 5 MTLRDWLEAEPFTLVMSSGFFSFFSHCGVLAALADESLVPEAVSGSSAGALTAGLWAAGLEPTEIRELYVSLRKED--FWDPAPGPGLLRG-----RRFRTLIRR---ASPVQRLEHCRRPLTVSVFDLLRMRTRVLSSGDLARALYASCAVPLMFHPLWHQGGWLIDGGLGDRPGLSGVPAGRRVFYHHIMYQSTWRRRDSADLGLPDRPNLAALTIPALPRPRPDALHV-GPSAWAAARTATLRALDRPV 245
BLAST of mRNA_H-paniculata_contig1921.4840.1 vs. uniprot
Match: A0A6N7Q127_9DELT (Patatin n=1 Tax=Polyangium spumosum TaxID=889282 RepID=A0A6N7Q127_9DELT) HSP 1 Score: 158 bits (400), Expect = 2.310e-42 Identity = 99/251 (39.44%), Postives = 133/251 (52.99%), Query Frame = 1
Query: 67 TLREWLSDGPFTLALSSSWFGLFCHAGVVCALVENGLAPARISGSSAGALVAVLWAMSMDTARLKEIMERAEERNPIVWASLLSRNMLPGVVNTHKSTRELLHRILEGAPVPDLEDLSIPVLVSAFDVTSMKPKVFSRGNATDALAASMAVPLLFKPVWAHGRPLLDGAVGDVAGVAGIDRAERTLYHHATYLPLWMTQHLSGFS-----NLVALKIGGLPYLNPWQLSGNGMKAFLRAKAATLRALDTPI 804
TLREWL +GPF++ LSS +FG F HAGV+ L + GL+PAR+SGSSAGALV +WA +++ + R + + W +L G K R L +L PV + +P+ VS +DV S K +V + G A+ AS VP LF PVW GRPLLDG + D G+AG+ ER LYHH W + + AL I LP + P++L G +AF A AT AL P+
Sbjct: 17 TLREWLHEGPFSMGLSSGFFGFFAHAGVMTVLEDEGLSPARVSGSSAGALVGGIWAAGASAVTIRDELLRLKRED--FWDMRPGPGLLAG-----KLFRARLEALL---PVRTFDRCRVPLAVSVYDVFSRKTRVLAEGPLAPAIQASCTVPGLFHPVWHEGRPLLDGGILDRHGLAGMPPGERLLYHHLASRSPWRKVNSPSLKVPERGGMAALVIESLPRVGPFRLP-EGARAFDIAARATRDALARPV 256
BLAST of mRNA_H-paniculata_contig1921.4840.1 vs. uniprot
Match: A0A2D9TE07_9DELT (Patatin n=1 Tax=Sandaracinus sp. TaxID=2024858 RepID=A0A2D9TE07_9DELT) HSP 1 Score: 157 bits (397), Expect = 4.710e-42 Identity = 105/263 (39.92%), Postives = 144/263 (54.75%), Query Frame = 1
Query: 61 MVTLREWLSDGPFTLALSSSWFGLFCHAGVVCALVENGLAPARISGSSAGALVAVLWAMSMDTARLKE---IMERAEERNPIVWASLLSRNMLPGVVNTHKSTRELLHRILEGAPVPDLEDLSIPVLVSAFDVTSMKPKVFSRGNATDALAASMAVPLLFKPVWAHGRPLLDGAVGDVAGVAGIDRAERTLYHHATYLPLWMTQ-----HLSGFSNLVALKIGGLPYLNPWQLSGNGMKAFLRAKAATLRALDTPIARGAMVR 825
M TLREWL+ P+TLA+SS +FG F H GV+ A+ E L PA +SGSSAGALV WA + L E +ERA +P +L G + K R+LL PV +++ +P +S +DV K V RG+ DA+ AS AVP LF+PVW GRP LDG + D G+AG+ R L+HH + W + ++ AL + GLP ++P+ L G +A+ RA AAT RA+D P GA++R
Sbjct: 1 MPTLREWLAAEPYTLAMSSGFFGFFAHTGVLQAIEEARLPPAAVSGSSAGALVTGSWAAGVGAEALAEELLALERAHFWDP----GFRPLGLLRGELFRAK-LRDLL-------PVHRIDETRVPARISVYDVLGRKTVVRDRGSLPDAIHASCAVPFLFQPVWLEGRPHLDGGLLDRPGLAGVTAGTRVLHHHLSSRSPWRRSTSPALRIPAREDVHALVLDGLPRVSPFDLEA-GHRAYERALAATRRAMDLPF-DGAVLR 249
BLAST of mRNA_H-paniculata_contig1921.4840.1 vs. uniprot
Match: A0A4U1H7W2_9DELT (Patatin n=1 Tax=Polyangium aurulentum TaxID=2567896 RepID=A0A4U1H7W2_9DELT) HSP 1 Score: 157 bits (398), Expect = 5.060e-42 Identity = 100/267 (37.45%), Postives = 136/267 (50.94%), Query Frame = 1
Query: 19 TNAELPSPPGANGCMVTLREWLSDGPFTLALSSSWFGLFCHAGVVCALVENGLAPARISGSSAGALVAVLWAMSMDTARLKEIMERAEERNPIVWASLLSRNMLPGVVNTHKSTRELLHRILEGAPVPDLEDLSIPVLVSAFDVTSMKPKVFSRGNATDALAASMAVPLLFKPVWAHGRPLLDGAVGDVAGVAGIDRAERTLYHHATYLPLWMTQHLSGFS-----NLVALKIGGLPYLNPWQLSGNGMKAFLRAKAATLRALDTPI 804
T+ SP AN TLREWL +GPF + +SS +FG F HAGV+ L + GLAPAR++GSSAGALV LWA +D A +++ + R + W +L G + R L +L PV + P+ VS +DV + +V G A+ AS VP LF PVW GRPLLDG + D G+AG+ R YHH W + + + AL I LP + P++L G +AF A+ A AL P+
Sbjct: 2 TSTSNVSPRPANA-PPTLREWLREGPFAIGMSSGFFGFFAHAGVMTVLEDEGLAPARVAGSSAGALVGGLWAAGLDAAAIRDELLRLRRED--FWDPRPGLGLLAGAL-----FRARLQALL---PVRSFDQCRAPLAVSVYDVRARGTRVLECGPLAPAIQASCTVPGLFHPVWLEGRPLLDGGILDRPGLAGMPEGTRLFYHHLAARSPWRRRQSPALAVPERQGMTALVIASLPRVGPFRLP-EGARAFEIARRAAREALGRPV 256
BLAST of mRNA_H-paniculata_contig1921.4840.1 vs. uniprot
Match: A0A4U1J9U9_9DELT (Patatin n=1 Tax=Polyangium fumosum TaxID=889272 RepID=A0A4U1J9U9_9DELT) HSP 1 Score: 157 bits (398), Expect = 5.200e-42 Identity = 101/258 (39.15%), Postives = 135/258 (52.33%), Query Frame = 1
Query: 67 TLREWLSDGPFTLALSSSWFGLFCHAGVVCALVENGLAPARISGSSAGALVAVLWAMSMDTARLKEIMERAEERNPIVWASLLSRNMLPGVVNTHKSTRELLHRILEGAPVPDLEDLSIPVLVSAFDVTSMKPKVFSRGNATDALAASMAVPLLFKPVWAHGRPLLDGAVGDVAGVAGIDRAERTLYHHATYLPLWMTQHLSGFS-----NLVALKIGGLPYLNPWQLSGNGMKAFLRAKAATLRALDTPIARGAMVR 825
TLREWL +GPF++ LSS +FG F HAGV+ L + GLAP R+SGSSAGALV +WA +++ + R + + W L +L G K R L +L PVP + +P+ VS +DV + +V + G A+ AS VP LF PVW GRPLLDG + D G+AG+ ER YHH W + AL I LP + P++L G +AF A AT AL P A+G +R
Sbjct: 17 TLREWLREGPFSMGLSSGFFGFFAHAGVMTVLEDEGLAPTRVSGSSAGALVGGIWAAGASAVTIRDELLRLKRED--FWDMRLGPGLLAG-----KLFRARLEALL---PVPTFDRCRVPLAVSVYDVFARGTRVLAGGPLAPAIQASCTVPGLFHPVWHEGRPLLDGGILDRHGLAGMPADERLFYHHLASRSPWRKADSPSLKVPTRDGMTALVIEALPRVGPFRLP-EGARAFDIAARATKDALSRP-AKGPEIR 262
BLAST of mRNA_H-paniculata_contig1921.4840.1 vs. uniprot
Match: A0A3N5HAV6_9DELT (Patatin n=1 Tax=Myxococcaceae bacterium TaxID=2484252 RepID=A0A3N5HAV6_9DELT) HSP 1 Score: 156 bits (394), Expect = 1.070e-41 Identity = 100/254 (39.37%), Postives = 134/254 (52.76%), Query Frame = 1
Query: 61 MVTLREWLSDGPFTLALSSSWFGLFCHAGVVCALVENGLAPARISGSSAGALVAVLWAMSMDTARLKEIMERAEERNPIVWASLLSRNMLPGVVNTHKSTRELLHRILEGAPVPDLEDLSIPVLVSAFDVTSMKPKVFSRGNATDALAASMAVPLLFKPVWAHGRPLLDGAVGDVAGVAGIDRAERTLYHHATYLPLWMTQHLSGFS-----NLVALKIGGLPYLNPWQLSGNGMKAFLRAKAATLRALDTPIA 807
M TLREWL + PFTL +SS +FG F HAGVV L E GL PARI+GSSAGALV LW + AR++E E R W +L G + R LL R+L P+ E+ + + +S +DV + + V RG A+ AS A+P+LF PV GR DG + D G+A + ER LYHH T P W ++ + L A+ + GLP L P++L+ G +A RA AL +A
Sbjct: 1 MPTLREWLREQPFTLVMSSGFFGFFAHAGVVSVLEEEGLRPARITGSSAGALVGALWGAGVPAARIRE--ELLALRREHFWDVRPGLGLLRGGL-----FRALLERVL---PIGTFEESPVRLALSVWDVLARRTVVLERGPLAPAIHASCALPVLFHPVRHGGRLYADGGIADRPGLASVGEGERVLYHHLTARPPWRRRNSAALQVPERRGLRAIALTGLPRLGPFRLA-RGREAMERAAGGAREALACSLA 243 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1921.4840.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1921.4840.1 >prot_H-paniculata_contig1921.4840.1 ID=prot_H-paniculata_contig1921.4840.1|Name=mRNA_H-paniculata_contig1921.4840.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=299bp MVTLREWLSDGPFTLALSSSWFGLFCHAGVVCALVENGLAPARISGSSAGback to top mRNA from alignment at H-paniculata_contig1921:1790..8937+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1921.4840.1 ID=mRNA_H-paniculata_contig1921.4840.1|Name=mRNA_H-paniculata_contig1921.4840.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7148bp|location=Sequence derived from alignment at H-paniculata_contig1921:1790..8937+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1921:1790..8937+ >mRNA_H-paniculata_contig1921.4840.1 ID=mRNA_H-paniculata_contig1921.4840.1|Name=mRNA_H-paniculata_contig1921.4840.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1794bp|location=Sequence derived from alignment at H-paniculata_contig1921:1790..8937+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |