prot_H-paniculata_contig192.4835.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig192.4835.1
Unique Nameprot_H-paniculata_contig192.4835.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length210
Homology
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BLAST of mRNA_H-paniculata_contig192.4835.1 vs. uniprot
Match: A0A6H5JNM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNM1_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 1.310e-33
Identity = 88/186 (47.31%), Postives = 118/186 (63.44%), Query Frame = 0 
Query:   18 PEASLFLGGTVFGERRFLQNASESVEGVVDELKDQLALLDLDSL--KGDNSSGNDHSGNEIKCTLGAAVRNKFVRRDPLHSGMLSARELGLALEDLGVTLLPGEVVMLARKFHPP---SKQSLLIDECHALRIDGASGPGASSPGRVKGGVVKNEDLDDTIAEYAPLVRLIVDTLVEALGTGSTPG 198
            P  +L+LGGTV+GE+ FL+  +++VE V+ ELKDQL+LLD+D L    D+ +    SG     TLG AV  +F RRDP  SG+LSARE+GLALED+GV L   EV+ LA++F PP    ++S       + R +G +  GA++   + GG      LD  +AEYAPLVRL+VDTL EA G  S  G
Sbjct:  775 PLETLYLGGTVYGEKSFLE-PTKTVESVLAELKDQLSLLDIDHLFPARDHGARGTGSGEVAVTTLGKAVGARFSRRDPTQSGLLSAREVGLALEDVGVCLQADEVITLAKRFKPPVGGPQESRGSGNDRSRRREGYAS-GAATVVDLDGG-----GLDGVVAEYAPLVRLVVDTLAEASGVDSAVG 953
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BLAST of mRNA_H-paniculata_contig192.4835.1 vs. uniprot
Match: D7G7I0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7I0_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 2.240e-32
Identity = 85/199 (42.71%), Postives = 109/199 (54.77%), Query Frame = 0 
Query:   18 PEASLFLGGTVFGERRFLQNASESVEGVVDELKDQLALLDLDSL--KGDNSSGNDHSGNEIKCTLGAAVRNKFVRRDPLHSGMLSARELGLALEDLGVTLLPGEVVMLARKFHPP----------------SKQSLLIDECHALRIDGASGPGASSPGRVKGGVVKNEDLDDTIAEYAPLVRLIVDTLVEALGTGSTPG 198
            P  +L+LGGTV+GER FL+  S++VE V+ ELKDQL+LLD+D L    D+ +    SG     TLG AV  +F RRDP  SG+LSARE+GLALED+GV L   EV+ LA+ F PP                 ++    D   A+ +DG                     LD  +AEYAPLVRL+VD+L EA G     G
Sbjct:  786 PHETLYLGGTVYGERTFLE-PSKTVESVLAELKDQLSLLDIDHLIPARDHGARGTGSGEGAVTTLGKAVGARFSRRDPTQSGLLSAREVGLALEDVGVRLQADEVITLAKSFKPPVGGPQENRGNGSDLSRGREGYASDAATAIDLDGGG-------------------LDGVVAEYAPLVRLVVDSLAEASGVDPAVG 964
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig192.4835.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JNM1_9PHAE1.310e-3347.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7I0_ECTSI2.240e-3242.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig192contigH-paniculata_contig192:31292..34671 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig192.4835.1mRNA_H-paniculata_contig192.4835.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig192 31292..34671 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig192.4835.1 ID=prot_H-paniculata_contig192.4835.1|Name=mRNA_H-paniculata_contig192.4835.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=210bp
LLDAGGSLSKSHHVCRPPEASLFLGGTVFGERRFLQNASESVEGVVDELK
DQLALLDLDSLKGDNSSGNDHSGNEIKCTLGAAVRNKFVRRDPLHSGMLS
ARELGLALEDLGVTLLPGEVVMLARKFHPPSKQSLLIDECHALRIDGASG
PGASSPGRVKGGVVKNEDLDDTIAEYAPLVRLIVDTLVEALGTGSTPGMD
TRRVGGRRW*
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