prot_H-paniculata_contig10762.483.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10762.483.1
Unique Nameprot_H-paniculata_contig10762.483.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length558
Homology
BLAST of mRNA_H-paniculata_contig10762.483.1 vs. uniprot
Match: D7FK51_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK51_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 4.310e-48
Identity = 203/577 (35.18%), Postives = 225/577 (38.99%), Query Frame = 0
Query:    1 MQAAVASPSFMGLSLSGNVLDAEAAKAIQGALAQPRCTLRRLFIDHASLGRASESFIATGVLTNRCLALTTLTGFRLGAAFARLGMPPQVEVFSNDQALEQVRLYWANHGNTATVPSAAGVAASAAVCGGXXXXXXXXXXAGIVSVRSGMGPFQESGAGRGTGRLASLSRAAATVCGGDGASQSRSQTQRASPKGVIGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSNGCRSTNRYPRYTCLALKQNPLPPPRPC---------PIQQLPFSAAELWSLHQHYFSPSPDHQRCLESPTTNPLGGGGSITPTIAPAPLKS-PGNKIPPIILPATAGGGAGCINGTNGGKDREGPGGXXXXXXXXXAAAGEGFLTGVDGVVGEGAGAGARRSRRSSSLGGEYDDHEDDADSPRPPSKRYRNAS----------TKTRIACFPRVQDRIRALKSKPDERGVLTLLRQLKFLQTGGGGGACNGGDGVSTTLAAPRVGGNLTHADGFPAPTADAMLSGHGRKGRTEGGAVVDGGGSGNVPTNCLADEEIERLLLEEL 557
            MQA   SPSF  LSLSGN LDAEAAKAIQ ALAQPRC+LR L++DH SLGRASE FIA GVL+NR LAL TLTGFRLG++FARLGMPPQV  FSNDQALEQ                                                                                       Q+A+P GV  GA    XXXXXXXXXXXXXXX                                  GCR                    P             I QLPFSAAELWSLHQHYFSP  DH     SP++       + TP+ +  P K+ PG              G G  NG    +D EG G               G     D  VG    AGARRS                                         TKTRIACFP V+ R+RALKSKPD+RG+LT+LRQLK LQT    G                        DG   P  D                        NV  N L D +IER+LLEEL
Sbjct:  497 MQATANSPSFTSLSLSGNALDAEAAKAIQAALAQPRCSLRCLYLDHTSLGRASEGFIANGVLSNRSLALVTLTGFRLGSSFARLGMPPQVANFSNDQALEQ---------------------------------------------------------------------------------------QKANPPGVREGALGAAXXXXXXXXXXXXXXXPGVPRRAV----------------------SEDAGCRGGVGXXXXXXXXXXXXXXAVPEALRASLVEALHQIAQLPFSAAELWSLHQHYFSPPLDHH---PSPSSRSSPTSAASTPSPSTCPSKAGPGRTWAAXXXXXXXXXGGGFPNGLATARDTEGRGSNPAGVLGPPGGGSRGCSGDEDAEVG----AGARRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKTRIACFPSVEARVRALKSKPDDRGILTVLRQLKHLQTASEEGGKEVXXXXXXXXXXXXXXXXXVVDDGALGPKNDVK----------------------NVLNNVLTDAQIERILLEEL 935          
BLAST of mRNA_H-paniculata_contig10762.483.1 vs. uniprot
Match: A0A6H5KVK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVK7_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 3.470e-41
Identity = 199/578 (34.43%), Postives = 232/578 (40.14%), Query Frame = 0
Query:   25 AKAIQGALAQPRCTLRRLFIDHASLGRASESFIATGVLTNRCLALTTLTGFRLGAAFARLGMPPQVEVFSNDQALEQVRLYWANHGNTATVPSAAGVAASAAVCGGXXXXXXXXXXAGIVSVRSGMGPFQ------ESGAGRGTGRLASLSRAAAT---------VCGGDGASQSRSQTQRASPKGVI---------------GGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSNGCRSTNRYPRYTCLALKQNPLPPPRPCPIQQLPFSAAELWSLHQHYFSPSPDHQRCLESPTTNPLGGGGSITPTIAPAPLKS-PGNK-IPPIILPATAGGGAGCINGTNGGKDREGPGGXXXXXXXXXAAAGEGFLTGVDGVVGEGAGAGARRSRRSSSLGGEYD----------DHEDDADSPRPPSKRYRNASTKTRIACFPRVQDRIRALKSKPDERGVLTLLRQLKFLQTGGGGGACNGGD---GVSTTLAAPRVGGNLTHADGFPAPTADAMLSGHGRKGRTEGGAVVDGGGSGNVPTNCLADEEIERLLLEEL 557
            A  +Q ALAQPRC+LR L +DH SLGRASE FIA GVL+NR LAL TLTGFRLG++FARLGMPPQV  FSNDQALEQVRLYWANH N A                 XXXXXXXXXX                    + G+  G G     +  A            C G G+  +   T++A P                   G                         XXX                       GSS G   T R       AL+ + +       I QLPFSAAELWSLHQHYFSP  DH     SP++                P  + PG               G G ++G+   +D EG                 G     D  VG    AG RRSRRS+S+G E D                                TRIACFP V+ R+RALKSKPD+RG+LT+LRQLK LQT     AC  G    G                 DG   P  +                        NV  N L D +IER+LLEEL
Sbjct:  542 AALMQAALAQPRCSLRCLCLDHTSLGRASEGFIANGVLSNRSLALVTLTGFRLGSSFARLGMPPQVANFSNDQALEQVRLYWANHVNQAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRDPGDGGSRIGDGAGKDFTGGALNNAHQPQRRQQCMGGGSPTAAVVTEKAIPPHPPSEYRPHHLSRYHQHQGDHQQNANPPGVREAALGAAATGHHGXXXGGRHHPGVSGRAVSADAGCQGGVGSSGG-DGTERAAAAVPEALRASLVEALHQ--IAQLPFSAAELWSLHQHYFSPPLDHH---PSPSSXXXXXXXXXXXXXXXCPSNAGPGRTWAAXXXXXXXXXXGGGFVHGSAIARDTEGRDSNPAGVPGPPGGGSRGCSGDEDAEVG----AGGRRSRRSASMGQEQDLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRIACFPSVEARVRALKSKPDDRGILTVLRQLKHLQT-----ACEEGGKEFGXXXXXXXXXXXXXXVVDDGVLGPKNEVK----------------------NVSNNVLTDAQIERILLEEL 1082          
BLAST of mRNA_H-paniculata_contig10762.483.1 vs. uniprot
Match: K0R4D8_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R4D8_THAOC)

HSP 1 Score: 89.7 bits (221), Expect = 5.740e-15
Identity = 46/101 (45.54%), Postives = 68/101 (67.33%), Query Frame = 0
Query:    9 SFMGLSLSGNVLDAEAAKAIQGALAQPRCTLRRLFIDHASLGRASESFIATGVLTNRCLALTTLTGFRLGAAFARLGMPPQVEVFSNDQALEQVRLYWANH 109
            S   L+LSGN+LD  A+KA+  ALA  R T+R+L++DH SL  A++  +A G+++N  LAL  ++GF LGA    LG+P  +E +SN+Q L+ +RL W  H
Sbjct:  640 SLTTLTLSGNILDTNASKAVSYALAYNR-TIRKLYVDHCSLSYAAQRHVAAGIVSNSNLALRVMSGFPLGAIAVTLGLPGAMEKWSNEQVLKFIRLMWDKH 739          
BLAST of mRNA_H-paniculata_contig10762.483.1 vs. uniprot
Match: A0A7S2KCJ2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KCJ2_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 2.470e-13
Identity = 43/98 (43.88%), Postives = 68/98 (69.39%), Query Frame = 0
Query:    9 SFMGLSLSGNVLDAEAAKAIQGALAQPRCTLRRLFIDHASLGRASESFIATGVLTNRCLALTTLTGFRLGAAFARLGMPPQVEVFSNDQALEQVRLYW 106
            S + L+LSGNVLD  A+KA+  ALA  + T+++L++DH SL  A++  IA G+++N  LAL  ++GF LGA    LG+P  +E ++N+Q L+ +R+ W
Sbjct:  398 SLLTLTLSGNVLDTNASKAVSYALAYNK-TIQKLYVDHCSLSYAAQRHIAAGIVSNSKLALRVMSGFPLGAISVTLGLPGAMENWTNEQVLKFIRVMW 494          
BLAST of mRNA_H-paniculata_contig10762.483.1 vs. uniprot
Match: A0A7S4ALF8_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ALF8_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 2.350e-11
Identity = 40/109 (36.70%), Postives = 63/109 (57.80%), Query Frame = 0
Query:    1 MQAAVASPSFMGLSLSGNVLDAEAAKAIQGALAQPRCTLRRLFIDHASLGRASESFIATGVLTNRCLALTTLTGFRLGAAFARLGMPPQVEVFSNDQALEQVRLYWANH 109
            M++   S   + LSLSGN +DA AAK++  ALA   C+L+ +F+ H S+G   +  IA G+++N   AL  L GF +G+    LG P  ++ ++N+Q    + L W  H
Sbjct:  553 MKSVAESKKLLSLSLSGNAIDATAAKSVAYALAY-NCSLKSIFLVHCSIGHEEQRHIAAGIVSNSRTALDRLNGFEIGSILLTLGFPEALKNWTNEQVFNFIHLMWDKH 660          
BLAST of mRNA_H-paniculata_contig10762.483.1 vs. uniprot
Match: A0A448YZK4_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZK4_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 3.990e-11
Identity = 41/109 (37.61%), Postives = 62/109 (56.88%), Query Frame = 0
Query:    1 MQAAVASPSFMGLSLSGNVLDAEAAKAIQGALAQPRCTLRRLFIDHASLGRASESFIATGVLTNRCLALTTLTGFRLGAAFARLGMPPQVEVFSNDQALEQVRLYWANH 109
            M++   S   + LSLSGN +DA AAK++  ALA   C+LR LF+ H S+G   +  IA G+++N    L  L GF +G     LG P  ++ ++N+Q  + + L W  H
Sbjct:  507 MKSVAESKMLLSLSLSGNAIDATAAKSVAYALAY-NCSLRSLFLVHCSIGHEEQRHIAAGIVSNSRTKLDQLNGFEIGPILLTLGFPEPLKNWTNEQVFKFIHLMWNKH 614          
BLAST of mRNA_H-paniculata_contig10762.483.1 vs. uniprot
Match: B8BT95_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BT95_THAPS)

HSP 1 Score: 64.7 bits (156), Expect = 9.780e-8
Identity = 34/70 (48.57%), Postives = 50/70 (71.43%), Query Frame = 0
Query:    9 SFMGLSLSGNVLDAEAAKAIQGALAQPRCTLRRLFIDHASLGRASESFIATGVLTNRCLALTTLTGFRLG 78
            S + L+LSGNVLD  A+KA+  ALA  + T+R+L++DH SL  A++  IA G+++N  LAL  ++GF LG
Sbjct:  229 SLLTLTLSGNVLDTNASKAVSYALAYNK-TIRKLYVDHCSLSYAAQRHIAAGIVSNSNLALRVMSGFPLG 297          
BLAST of mRNA_H-paniculata_contig10762.483.1 vs. uniprot
Match: A0A7S4JA02_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JA02_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 6.540e-7
Identity = 40/94 (42.55%), Postives = 55/94 (58.51%), Query Frame = 0
Query:   13 LSLSGNVLDAEAAKAIQGALAQPRCTLRRLFIDHASLGRASESFIATGVLTNRCLALTTLTGFRLGAAFARLGMPPQVEVFSNDQALEQVRLYW 106
            L+LSG   D  +AKAI  ALA    +L     D  S+G A++  IA G+++N  L+L  LTGFR+GA  A LG+P  +E + N + L  VR  W
Sbjct:  584 LTLSGIKFDTNSAKAISYALAY-NSSLVAFGADKCSVGYAAQRHIAAGIVSNPKLSLRRLTGFRIGAIAATLGLPSALEGWGNSRCLAFVRHMW 676          
BLAST of mRNA_H-paniculata_contig10762.483.1 vs. uniprot
Match: A0A1Z5K171_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K171_FISSO)

HSP 1 Score: 62.0 bits (149), Expect = 2.400e-6
Identity = 35/98 (35.71%), Postives = 57/98 (58.16%), Query Frame = 0
Query:    9 SFMGLSLSGNVLDAEAAKAIQGALAQPRCTLRRLFIDHASLGRASESFIATGVLTNRCLALTTLTGFRLGAAFARLGMPPQVEVFSNDQALEQVRLYW 106
            S   L L+G  LD  ++KA+  ALA    +L+ L++D+ ++G AS+  I  G+++N+  +L  +TGF +      LG+P   E +SNDQ L  +R  W
Sbjct:  436 SLRSLGLAGIHLDQNSSKALSYALAY-NMSLQTLYLDNCNVGYASQRHIVAGIVSNQRASLRLVTGFDIAPIAITLGLPRLPETWSNDQVLGFIRYMW 532          
BLAST of mRNA_H-paniculata_contig10762.483.1 vs. uniprot
Match: A0A7S4EEC4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EEC4_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 2.520e-6
Identity = 40/107 (37.38%), Postives = 57/107 (53.27%), Query Frame = 0
Query:    9 SFMGLSLSGNVLDAEAAKAIQGALAQPRCTLRRLFIDHASLGRASESFIATGVLTNRCLALTTLTGFRLGAAFARLGMPPQVEVFSNDQALEQVRLYWANHGNTATV 115
            S   L+L G  +D  A+KA+  ALA  + +L+R  ID  S+G + +  I  G+++NR   L  LTGF L      LG+P   E + ND+ L  VR  W +   T TV
Sbjct:  533 SLKRLALCGVPMDQNASKAVSYALAYNQ-SLQRFNIDSCSVGYSGQRHIVAGIVSNRYTKLHRLTGFPLAPIIMTLGLPQLPEEWGNDRVLSFVRFMWTHWKLTKTV 638          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10762.483.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7FK51_ECTSI4.310e-4835.18Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KVK7_9PHAE3.470e-4134.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
K0R4D8_THAOC5.740e-1545.54Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S2KCJ2_9STRA2.470e-1343.88Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S4ALF8_9STRA2.350e-1136.70Hypothetical protein n=2 Tax=Pseudo-nitzschia aust... [more]
A0A448YZK4_9STRA3.990e-1137.61Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
B8BT95_THAPS9.780e-848.57Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S4JA02_9STRA6.540e-742.55Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A1Z5K171_FISSO2.400e-635.71Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S4EEC4_9STRA2.520e-637.38Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..557
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 12..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10762contigH-paniculata_contig10762:469..8177 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10762.483.1mRNA_H-paniculata_contig10762.483.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10762 352..8551 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10762.483.1 ID=prot_H-paniculata_contig10762.483.1|Name=mRNA_H-paniculata_contig10762.483.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=558bp
MQAAVASPSFMGLSLSGNVLDAEAAKAIQGALAQPRCTLRRLFIDHASLG
RASESFIATGVLTNRCLALTTLTGFRLGAAFARLGMPPQVEVFSNDQALE
QVRLYWANHGNTATVPSAAGVAASAAVCGGGGSVAGAGGGAGIVSVRSGM
GPFQESGAGRGTGRLASLSRAAATVCGGDGASQSRSQTQRASPKGVIGGA
GGGAGGGVGNGGGGGGSGDGGGGPSAFIPAPAVTTTTGAIAAGAGAGAGG
SSNGCRSTNRYPRYTCLALKQNPLPPPRPCPIQQLPFSAAELWSLHQHYF
SPSPDHQRCLESPTTNPLGGGGSITPTIAPAPLKSPGNKIPPIILPATAG
GGAGCINGTNGGKDREGPGGGGGGENGQGAAAGEGFLTGVDGVVGEGAGA
GARRSRRSSSLGGEYDDHEDDADSPRPPSKRYRNASTKTRIACFPRVQDR
IRALKSKPDERGVLTLLRQLKFLQTGGGGGACNGGDGVSTTLAAPRVGGN
LTHADGFPAPTADAMLSGHGRKGRTEGGAVVDGGGSGNVPTNCLADEEIE
RLLLEEL*
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