prot_H-paniculata_contig192.4831.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig192.4831.1
Unique Name	prot_H-paniculata_contig192.4831.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	148

Homology

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BLAST of mRNA_H-paniculata_contig192.4831.1 vs. uniprot
Match: A0A6H5JP00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP00_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 2.700e-23
Identity = 50/80 (62.50%), Postives = 61/80 (76.25%), Query Frame = 0

Query:   40 ISWRACLRRVFDRRLDLDGDGYLTEADIASCFPEIGISVSPADEREAARIVLYAMDSRNRRLGQATFKDFAQFVCLDSST 119
            I W  CLRRVFDRRLD+DGDG+LTE D+A+C PEIG+ V+    R+AAR +L AMD R R LGQATFKDF +FV  + S+
Sbjct:  343 IPWSVCLRRVFDRRLDVDGDGFLTEGDLAACLPEIGVHVTG---RDAARTLLSAMDFRQRGLGQATFKDFVEFVGTNGSS 419

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BLAST of mRNA_H-paniculata_contig192.4831.1 vs. uniprot
Match: D7G7I0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7I0_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 1.950e-22
Identity = 49/80 (61.25%), Postives = 61/80 (76.25%), Query Frame = 0

Query:   40 ISWRACLRRVFDRRLDLDGDGYLTEADIASCFPEIGISVSPADEREAARIVLYAMDSRNRRLGQATFKDFAQFVCLDSST 119
            I W  CLRRVFDR LD+DGDG+LTE D+A+C PEIG+ V+    R+AAR +L AMDSR R LGQATFKDF +F+  + S+
Sbjct: 1712 IPWSVCLRRVFDRWLDVDGDGFLTEGDLAACLPEIGVYVTG---RDAARTLLSAMDSRQRGLGQATFKDFVEFMGTNGSS 1788

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig192.4831.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig192.4831.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JP00_9PHAE	2.700e-23	62.50	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G7I0_ECTSI	1.950e-22	61.25	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.238.10		coord: 6..147 e-value: 3.6E-6 score: 28.8
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 55..67
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 41..77 score: 8.46
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 42..115

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig192	contig	H-paniculata_contig192:14480..15976 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig192.4831.1	mRNA_H-paniculata_contig192.4831.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig192 14480..15976 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig192.4831.1 ID=prot_H-paniculata_contig192.4831.1|Name=mRNA_H-paniculata_contig192.4831.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=148bp
QGPRIVSEFRQAVISLATLAGLEHFDPGDEHGYGEKVQGISWRACLRRVF
DRRLDLDGDGYLTEADIASCFPEIGISVSPADEREAARIVLYAMDSRNRR
LGQATFKDFAQFVCLDSSTATDRRTRSATVYNGRTFDRLKPSNQQVIM

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018247	EF_Hand_1_Ca_BS
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair