prot_H-paniculata_contig192.4833.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig192.4833.1
Unique Nameprot_H-paniculata_contig192.4833.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length176
Homology
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BLAST of mRNA_H-paniculata_contig192.4833.1 vs. uniprot
Match: D7G7I0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7I0_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 2.880e-54
Identity = 105/175 (60.00%), Postives = 127/175 (72.57%), Query Frame = 0 
Query:    1 MESQGGATARRAWLNTLARMFHSADVHNTGVLDRQEFSRCLRGMQVKLSIREMDRLFQALQHQERNGAEELEGAHAGIRARYSDIIDFLRSKAQTWYQAEKIIAEKIARSMGSDPAARRAWLNRLRRRFTSLDAFRVGILGASDLLQALRDGGCSLRVEEEARLLDALEIEESAR 175
            ME+QGG+TARRAW+N+L R F +AD+H TG L+R EF RCLR M V LS RE +RLF +L        + + GA      RY ++++FLR K   WY  E  IA+KI  +MG D  +RRAWLNR+RRRF SLDAFR G+LGASDLLQAL+DGGC L +EEEARLLDALE EESAR
Sbjct: 1115 MEAQGGSTARRAWVNSLRRRFQTADIHETGTLNRDEFFRCLRSMHVSLSAREGERLFLSLLP---TTTDPMRGA------RYPELVNFLRGKNAMWYDVESDIADKILTAMGPDGPSRRAWLNRIRRRFMSLDAFRAGVLGASDLLQALKDGGCYLGLEEEARLLDALETEESAR 1280
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BLAST of mRNA_H-paniculata_contig192.4833.1 vs. uniprot
Match: A0A6H5JNM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNM1_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 8.070e-19
Identity = 51/108 (47.22%), Postives = 66/108 (61.11%), Query Frame = 0 
Query:    1 MESQGGATARRAWLNTLARMFHSADVHNTGVLDRQEFSRCLRGMQVKLSIREMDRLFQALQHQERNGAEELEGAHAGIR-ARYSDIIDFLRSKAQTWYQAEKIIAEKI 107
            +E+QGG TARRAW+N+L R F +AD+H TG L+R  F RCLR M V LS RE +RLF +L          L       R ARY ++++FLR K   WY  E  IA+K+
Sbjct: 1104 LEAQGGCTARRAWVNSLRRRFQTADIHETGTLNRDAFFRCLRSMHVSLSAREGERLFLSL----------LPTTTDPTRGARYPELVNFLRGKNAKWYDVESDIADKV 1201
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig192.4833.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7I0_ECTSI2.880e-5460.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JNM1_9PHAE8.070e-1947.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 9..175
e-value: 5.0E-10
score: 41.3
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 12..47
score: 9.688
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 16..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig192contigH-paniculata_contig192:20858..28187 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig192.4833.1mRNA_H-paniculata_contig192.4833.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig192 14480..29189 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig192.4833.1 ID=prot_H-paniculata_contig192.4833.1|Name=mRNA_H-paniculata_contig192.4833.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=176bp
MESQGGATARRAWLNTLARMFHSADVHNTGVLDRQEFSRCLRGMQVKLSI
REMDRLFQALQHQERNGAEELEGAHAGIRARYSDIIDFLRSKAQTWYQAE
KIIAEKIARSMGSDPAARRAWLNRLRRRFTSLDAFRVGILGASDLLQALR
DGGCSLRVEEEARLLDALEIEESAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair