prot_H-paniculata_contig192.4830.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig192.4830.1
Unique Nameprot_H-paniculata_contig192.4830.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length298
Homology
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BLAST of mRNA_H-paniculata_contig192.4830.1 vs. uniprot
Match: A0A6H5JP00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP00_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 1.610e-14
Identity = 45/93 (48.39%), Postives = 59/93 (63.44%), Query Frame = 0 
Query:    2 DLEEALARIDAHARGKLLPWKIKAALGSLGLPVNKLARSTWIGLTDSLDQDAYGHVFYRDFLNNLLLPKRRVEALPASSSGQPTPRVFTRGHP 94
            DL  A+AR+D H  G+L  WKIKAAL + GL V  +  ++W+ LT SLDQDAYGH+FY DF++ LL+P  +   L  SS   P  R  +  HP
Sbjct:  482 DLRLAMARLDPHGSGRLPLWKIKAALQAFGLRVRNVPHASWLDLTGSLDQDAYGHLFYSDFVD-LLMPSEQSPYL--SSPDPPLDRRRSNAHP 571
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BLAST of mRNA_H-paniculata_contig192.4830.1 vs. uniprot
Match: D7G7I0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7I0_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 1.840e-12
Identity = 43/92 (46.74%), Postives = 57/92 (61.96%), Query Frame = 0 
Query:    2 DLEEALARIDAHARGKLLPWKIKAALGSLGLPVNKLARSTWIGLTDSLDQDAYGHVFYRDFLNNLLLPKRRVEALPASSSGQPTPRVFTRGH 93
            DL  A+AR+D H  G+L   KIKAAL   GL V  +  ++W+ LT SLDQDAYGH+FY DF++ LL+P  +   L  SS   P+ R  +  H
Sbjct: 1851 DLRRAMARLDPHGSGRLPLGKIKAALQGFGLRVGNVPHASWLDLTGSLDQDAYGHLFYSDFVD-LLMPSEQSPYL--SSPDPPSDRRKSNAH 1939
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig192.4830.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JP00_9PHAE1.610e-1448.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7I0_ECTSI1.840e-1246.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig192contigH-paniculata_contig192:11301..13493 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig192.4830.1mRNA_H-paniculata_contig192.4830.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig192 9474..13544 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig192.4830.1 ID=prot_H-paniculata_contig192.4830.1|Name=mRNA_H-paniculata_contig192.4830.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=298bp
MDLEEALARIDAHARGKLLPWKIKAALGSLGLPVNKLARSTWIGLTDSLD
QDAYGHVFYRDFLNNLLLPKRRVEALPASSSGQPTPRVFTRGHPSSARPW
YGAGRSLSPTATTTVRTQTTNAHRPSTAPPSSLGYHHHGHWVSPRTVSPH
GRRKQSRGSGGFERNIPEPNRHSRKPSQSDNPGGKFKSIQRSMRAGISRT
NGGGAGDSGTRMTEEVGWKRTPHGKDVQRDDVTDTGVTIHYKSDRFIESL
EEALRDVLEDKHGDAVEGAQALRFALNQQDLTRRQESWWRWRRPEHH*
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