mRNA_H-paniculata_contig1919.4826.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1919.4826.1 vs. uniprot
Match: A0A6H5KRC0_9PHAE (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRC0_9PHAE) HSP 1 Score: 358 bits (919), Expect = 2.170e-108 Identity = 275/727 (37.83%), Postives = 355/727 (48.83%), Query Frame = 1
Query: 565 LRREIESLVTVVSTTEIATAAFRPTTHIQQRAQTSMGPFVAAAASGDSAQRSVGRLIARFRVKRALAKNKSNTGDGLVFPFTFPHQQRQREYSEMTNRGCNSATVQNPLLLVNVGRLLPRQDCDKLVNEAREMERATWQTWDGDGGSCGGKDAMTVEAISLAELPESRWLWEKELMGAMQARVASAFGVPNDGIILGQVDTTFVCKILPRLRGPSEA----GEGTYAGLP------------------------------PVFSFRRSTSLIAFAVALSPESP----EWTLCLEQRGQCIRPCEQGAGVIFSGKLRHAVA----GMQRPCQSEAQNDLLPATQPHVFILRGFASIRDPSISTDVARWQWGKPAWHVDANWVKDEDILHCAWVGEQAGVEVGSKVIN---------AASASETATGSSVSGIQDKISPRAKHKALVVKPPKDICEGKSGSTAAAVRYRQPLQRANSSLAHRYFRQGGGQRSMDIPVVDSCNHPVIDLRVVPWISRSCLPWRWGQ-RRQKPKEITIIASLHQTFP---RRLLPGHGRKVG--------------------------------KAGLSVQAGTSLSMDAALQTLFGGSRRG---------QAVPGKSRF---------VDVPVPPIKYVFVDPRYRGLRLGRRLFLEAMCFLAERGFRFALIIVEDNGSGGLFGFYEEMGFVKAEEQLGIPRVMIAPIPP 2430
L REIES+V ++S +E++T +QQR +T V+ A+R++ RL AR R AL++ + + D P NPL+ V +G L+ +DC+ +V EA +++ W WDGD G K A+ SL +LP SR LW+ + ++ARVA +GV I+ V+ FVCK+ + G + G+G G FRRS SL+ F+VA+S E W +CLEQRG+C RP QG GVIFSGKLRHA G P S ++ P +LRGFA+IR P ++ ARWQWG PAWH+DA W++D+DIL WV G ++G++ + AA+ASE G++ +G+ PR+ + LQR N++LAHRY+RQG MD+PVVDS PVIDL V S L WR G KP E+T+ A L + FP RR + KAGLS AG S MDAALQ LFG S Q V G S V V VPPIKYVFVDPRYRGL LG+RLFLEAM LA RGFRFALI+VEDNG+GGLFGFYE+MGFV+AEE+LG+PR MIAPIPP
Sbjct: 22 LEREIESVVKIISRSEMSTV------WLQQRDRTGEANTVS------KARRNLRRLYARARSTWALSRTQPSYPDATSLP------------------------AGNPLMRVGLGGLMSPRDCNTIVREALQVD--DWTPWDGDLG----KHAL---GTSLEKLPRSRALWDGKAGDRVRARVAGLYGVQESSIV---VNALFVCKVGLNVDGLRDEVLREGQGRSVGTLHEAVDRAAAXXXXXXXXXXXXXXXXXQLSIEASDFRRSRSLLTFSVAISTEDALLPCPWAVCLEQRGECFRPGGQGTGVIFSGKLRHASLRIPHGAGAPASS-GNSERPRQDHPPALLLRGFANIRHPLVAEGSARWQWGSPAWHIDAPWIRDQDILDRVWVA--GGTDLGAEAADGRHPPPAGGAAAASEA--GTAPAGVDP---PRSNY----------------------------LQRMNTTLAHRYYRQG--LAGMDVPVVDSAGRPVIDL-VEDGGGGSSL-WRRGVIGADKPGEVTLKAVLRRRFPWSRRRQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAGLSTAAGASPRMDAALQQLFGSSSTSYXXXXXXXEQVVAGDSPLAARQQVSPLVGVTVPPIKYVFVDPRYRGLGLGKRLFLEAMRSLARRGFRFALIVVEDNGTGGLFGFYEDMGFVRAEEELGLPRAMIAPIPP 660
BLAST of mRNA_H-paniculata_contig1919.4826.1 vs. uniprot
Match: D8LFR9_ECTSI (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFR9_ECTSI) HSP 1 Score: 293 bits (751), Expect = 6.370e-86 Identity = 184/388 (47.42%), Postives = 224/388 (57.73%), Query Frame = 1
Query: 1333 QRGQCIRPCEQGAGVIFSGKLRHAVAGMQRPCQSEAQNDLLPATQ---PHVFILRGFASIRDPSISTDVARWQWGKPAWHVDANWVKDEDILHCAWVGEQAGVEVGSKVINAASASETATGSSVSGIQDKISPRAKHKALVVKPPKDICEGKSGSTAAAVRYRQPLQRANSSLAHRYFRQGGGQRSMDIPVVDSCNHPVIDLRVVPWISRSCLPWRWGQ-RRQKPKEITIIASLHQTFPRRLLPGHGRKVGKAGLSVQAGTSLSMDAALQTLFG------------------GSRRGQAVPGKSRFVDVPVPPIKYVFVDPRYRGLRLGRRLFLEAMCFLAERGFRFALIIVEDNGSGGLFGFYEEMGFVKAEEQLGIPRVMIAPIPP 2430
+RG+C RP QG G+IFSGKLRHA + + A + ++ P V +LRGFASI+ PS++ + ARWQWG PAWH+DA W++D+DIL WV +G ++G+ E A G +H G + + R LQR N++LAHRY+RQG MD+PVVDS PVIDL +S WR G KP E+T+ A L + FP R+VGKAGLS AG S MDAALQ LFG G A S V VPVPPIKYVFVDPRYRGL LG+RLFLEAM LA RGFRFALI+VEDNG+GGLFGFYE+MGFV+AEE+LG+PR MIAPIPP
Sbjct: 150 KRGECFRPGGQGTGIIFSGKLRHASLRIPHGDGAPAGSGNSEGSRQEHPPVLLLRGFASIQHPSVAEESARWQWGSPAWHIDAPWIRDQDILDRVWVA--SGSDLGA---------EAADG--------------RHPXXXXXXXXXXXXGTAPAGVDPPRSYY-LQRMNTTLAHRYYRQG--LAGMDVPVVDSAGRPVIDLVEDGGVSSW---WRRGVIGADKPGEVTLKAVLRRRFPW----SRRRQVGKAGLSTDAGASPRMDAALQQLFGSXXXXXXXXXXXXXXVVAGDSPLAARQQGSPLVGVPVPPIKYVFVDPRYRGLGLGKRLFLEAMRSLARRGFRFALIVVEDNGTGGLFGFYEDMGFVRAEEELGLPRAMIAPIPP 502
BLAST of mRNA_H-paniculata_contig1919.4826.1 vs. uniprot
Match: A0A835ZI96_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI96_9STRA) HSP 1 Score: 150 bits (378), Expect = 2.760e-34 Identity = 152/534 (28.46%), Postives = 216/534 (40.45%), Query Frame = 1
Query: 883 NPLLLVNVGRLLPRQDCDKLVNEAREMERATWQTWDGDGGSCGGKDAMTVEAISLAELPESRWLWEKELMGAMQARVASAFGVPNDGIILGQVDTTFVCK--ILPRLRGPSEAGEGTYAGLPPVFSFRRST---------------SLIAFAV--ALSPESPEWTLCLEQRGQCIR-PCEQGAGVIFSGKLRHAVA-GMQRPCQSEAQNDLLPATQPHVFI---LRGFASIRDPSISTDVARWQWGKPAWHVDANWVKDEDILHCAWVGEQAGVEVGSKVINAASASETATGSSVSGIQDKISPRAKHKALVVKPPKDICEGKSGSTAAAVRYRQPLQRANSSLAHRYFRQGGGQRSMDIPVVDSCNHPVIDLRVVPWISRSCLPWRWGQRRQKPKEITIIASLHQTFPRRLLPGHGRK-----VGKAGLSVQAGTSLSMDAALQTLFGGSRRGQAVPGKSRFVDVPVPPIKYVFVDPRYRGLRLGRRLFLEAMCFLAERGFRFALIIVEDNGSGGLFGFYEEMGFVKAEEQLG 2397
NPL V +G R + DK A E++R W D S D MTV ++AELP LW+ L ++A + +A G+P + V + P R + +P + S+ + L++F V ALS TL LE + +R + G + KLRH V + P + A +P + L G A + P++ D+ W+ G PAWHVD W+++ ++L W ++ P A+ A ++ D S ++ PL A AHRY RQ G P + L++ QR K E T+ A PRR K +G+AG G+S +MD A+ LFGG + G + P ++ VPV P+ YV+VDPRYRG LGRRLFL M LA G +A+I V DNG GGL FYE MG+ A LG
Sbjct: 100 NPLERVTLGAFA-RLEPDKSSRLAAELQR--W-CMDAQQQSSLSNDLMTV---NVAELPMVSELWDATLQHGLRAALGAACGLPPCAVRFADTPRLHVLLRGVEPPPREDERCNDAAAVTVPALMSYLAAARGDQGSGGGSYGGAAGLMSFYVPLALSGAEAAATLSLELQDSGLRFELARDTGALLCSKLRHTVTLNVSAPHGTAADRGSASPREPGAIVAAVLFGTAHLVHPALRGDIEHWRDGAPAWHVDRPWLRNSEVLDRCW---------------------------------RVDP-AQGGACALQQRSDAAPADSTASEGQRFALTPLDGA----AHRYLRQRGSAA------------PEVTLQL--------------QREGKTDEYTMHAYAECPGPRRRAWRGTNKQRRICIGRAGFRSTTGSSAAMDTAIWELFGG-QGGLSAPPRA----VPVAPVVYVYVDPRYRGFGLGRRLFLACMSELAAMGVGYAVITVLDNGGGGLLPFYEGMGYRDASTHLG 557
BLAST of mRNA_H-paniculata_contig1919.4826.1 vs. uniprot
Match: A0A836CMF2_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMF2_9STRA) HSP 1 Score: 142 bits (357), Expect = 6.910e-32 Identity = 141/474 (29.75%), Postives = 200/474 (42.19%), Query Frame = 1
Query: 1018 DAMTVEAISLAELPESRWLWEKELMGAMQARVASAFGVPNDGIILGQVDTTFVCKILPRLRGPSEAGEGTY--AGLPPVFSFRRSTSLIAFAV--ALSPESPEWTLCLEQRGQCIR-PCEQGAGVIFSGKLRH-AVAGMQRPCQSEAQNDLLPATQPHVF---ILRGFASIRDPSISTDVARWQWGKPAWHVDANWVKDEDILHCAWVGEQAGVEVGSKVINAASASETATGSSVSGIQDKISPRAKHKALVVKPPKDICEGKSGSTAAAVRYRQPLQRANSSLAHRYFRQGGGQRSMDIPVVDSCNHPVIDLRVVPWISRSCLPWRWGQRRQKPKEITIIASLHQTFPRRLLPGHGRK-----VGKAGLSVQAGTSLSMDAALQTLFGGSRRGQAVPGKSRFVDVPVPPIKYVFVDPRYRGLRLGRRLFLEAMCFLAERGFRFALIIVEDNGSGGLFGFYEEMGFVKAEEQLG 2397
D MTV ++AELP + LW+ L + A + +A G+P + DT V +L R PS G+ A + L++F V ALS TL L + +R +G G + KLRH A + P + A +P +L G A + P++ D+ W+ G PAWHVD W+++ ++L W ++ P A+ A ++ D S + + R+ L AHRY RQ G P + L++ QR K +E T+ A P+R K +G+AG G+S +MDAA+ LFGG + G + P + VPV P+ YV+VDPRYRG LGRRLFL M LA G +A+I V DNG GGL FYE MG+ A LG
Sbjct: 108 DLMTV---NVAELPVASELWDATLQHGLCAALGAACGLPPRAVRFA--DTPAV-HVLLRGAKPSPRGDERCDDAXXXXXXXXDVAAGLMSFYVPLALSGVEAAATLSLRIQDSGLRFNLVRGTGALLCSKLRHTATLHVNAPHGTAADRGSASPHEPGAIAAAVLCGTAHLVHPALRGDIEHWRDGAPAWHVDRPWLRNSEVLDRCW---------------------------------RVDP-AQGGACALQQRSDAAPADS-TASEGQRFALTLL---DCAAHRYLRQRGSAA------------PEVTLQL--------------QREGKTEEYTMRAYAECPGPQRRAWFRTNKQRRICIGRAGFRSTTGSSAAMDAAIWGLFGG-QGGLSAPQRM----VPVAPVVYVYVDPRYRGFGLGRRLFLACMSELAAMGVGYAVITVLDNGGGGLLPFYEGMGYRDASAHLG 506 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1919.4826.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1919.4826.1 >prot_H-paniculata_contig1919.4826.1 ID=prot_H-paniculata_contig1919.4826.1|Name=mRNA_H-paniculata_contig1919.4826.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=818bp MTLLISLFSATTITYVSAFATRSWTHTGYKRCSPKTRLWSGRALSSTVVAback to top mRNA from alignment at H-paniculata_contig1919:16795..20875+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1919.4826.1 ID=mRNA_H-paniculata_contig1919.4826.1|Name=mRNA_H-paniculata_contig1919.4826.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4081bp|location=Sequence derived from alignment at H-paniculata_contig1919:16795..20875+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1919:16795..20875+ >mRNA_H-paniculata_contig1919.4826.1 ID=mRNA_H-paniculata_contig1919.4826.1|Name=mRNA_H-paniculata_contig1919.4826.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4908bp|location=Sequence derived from alignment at H-paniculata_contig1919:16795..20875+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |