prot_H-paniculata_contig1918.4817.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1918.4817.1
Unique Nameprot_H-paniculata_contig1918.4817.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length212
Homology
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BLAST of mRNA_H-paniculata_contig1918.4817.1 vs. uniprot
Match: D7FKY3_ECTSI (Outer dynein arm docking complex protein oda-dc n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKY3_ECTSI)

HSP 1 Score: 206 bits (525), Expect = 1.420e-59
Identity = 139/222 (62.61%), Postives = 155/222 (69.82%), Query Frame = 0 
Query:    3 QDTFHASNPTDAASTNKGPVVEAESQSPLMENLEGASG---SVPRGFAS--------------SGVGLTSGCGALGTLGGMKSVISIQSKRLAQDVNHVYDRQILFTTKIQFQRARIEDLTFRIAKAEKELEDKRKSAGPETTQTVKGGISATEREIARVENRLQQMLAKASMLDAANTKRKERVNSLRREKMAETKAKRRLEAELERAKATCSSTTRQTQQ 207
            QD F AS   DA+S+ K P VE  SQ        G S    S+P G                 +G GL SG          KSVIS+QSKRLA DVN+VYDRQIL+T KIQFQR+RIEDLTFRIAKAEKELEDKRK+AGP+  QTVKGG+S TEREI RVENRLQQ L KASMLDAAN +RKE VNSLRREKMAE KA++RL AELERA+A C+STTR TQQ
Sbjct:    5 QDNFQASGVVDASSS-KIPGVEVGSQQAPAPTQGGGSVRGISLPMGMXXXXXXXXXXXXAAFLTGGGLLSG----------KSVISVQSKRLADDVNYVYDRQILYTNKIQFQRSRIEDLTFRIAKAEKELEDKRKTAGPDNAQTVKGGVSTTEREIQRVENRLQQTLMKASMLDAANARRKECVNSLRREKMAEVKAQKRLVAELERARAICASTTRATQQ 215
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1918.4817.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKY3_ECTSI1.420e-5962.61Outer dynein arm docking complex protein oda-dc n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 170..204
NoneNo IPR availableCOILSCoilCoilcoord: 135..162
NoneNo IPR availableCOILSCoilCoilcoord: 95..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1918contigH-paniculata_contig1918:4380..6562 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1918.4817.1mRNA_H-paniculata_contig1918.4817.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1918 4290..6562 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1918.4817.1 ID=prot_H-paniculata_contig1918.4817.1|Name=mRNA_H-paniculata_contig1918.4817.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=212bp
MSQDTFHASNPTDAASTNKGPVVEAESQSPLMENLEGASGSVPRGFASSG
VGLTSGCGALGTLGGMKSVISIQSKRLAQDVNHVYDRQILFTTKIQFQRA
RIEDLTFRIAKAEKELEDKRKSAGPETTQTVKGGISATEREIARVENRLQ
QMLAKASMLDAANTKRKERVNSLRREKMAETKAKRRLEAELERAKATCSS
TTRQTQQATRL*
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