prot_H-paniculata_contig1917.4814.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1917.4814.1
Unique Nameprot_H-paniculata_contig1917.4814.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length973
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1917.4814.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 518..579
e-value: 8.5E-9
score: 35.4
coord: 589..647
e-value: 2.9E-10
score: 40.1
coord: 658..719
e-value: 8.9E-7
score: 28.9
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 879..911
e-value: 6.4E-7
score: 29.0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 283..329
e-value: 6.6E-9
score: 35.8
coord: 459..507
e-value: 7.4E-11
score: 42.1
coord: 740..787
e-value: 4.5E-8
score: 33.1
coord: 387..435
e-value: 5.9E-11
score: 42.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 216..244
e-value: 0.0053
score: 16.9
coord: 816..842
e-value: 0.056
score: 13.7
coord: 253..279
e-value: 0.097
score: 13.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 816..848
e-value: 0.003
score: 15.6
coord: 852..883
e-value: 0.0018
score: 16.3
coord: 251..283
e-value: 0.0021
score: 16.1
coord: 709..742
e-value: 7.4E-5
score: 20.7
coord: 778..804
e-value: 2.0E-4
score: 19.3
coord: 216..248
e-value: 1.0E-4
score: 20.2
coord: 568..600
e-value: 7.1E-5
score: 20.7
coord: 285..319
e-value: 1.8E-5
score: 22.6
coord: 885..918
e-value: 9.3E-7
score: 26.6
coord: 321..353
e-value: 0.0023
score: 16.0
coord: 392..424
e-value: 2.8E-6
score: 25.1
coord: 605..637
e-value: 3.8E-8
score: 31.0
coord: 425..450
e-value: 2.6E-5
score: 22.1
coord: 497..532
e-value: 1.2E-6
score: 26.3
coord: 673..706
e-value: 1.2E-4
score: 20.0
coord: 462..495
e-value: 2.0E-7
score: 28.7
coord: 534..566
e-value: 5.5E-5
score: 21.1
coord: 743..776
e-value: 6.5E-5
score: 20.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 776..810
score: 9.569
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 706..740
score: 10.446
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 460..494
score: 12.551
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 388..422
score: 11.498
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 566..600
score: 11.378
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 601..635
score: 11.137
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 353..387
score: 8.364
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 423..457
score: 10.358
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 636..670
score: 10.676
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 248..282
score: 9.219
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 883..917
score: 11.312
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 918..952
score: 5.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 495..525
score: 9.043
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 318..352
score: 9.032
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 213..247
score: 10.073
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 283..317
score: 11.772
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 813..847
score: 8.977
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 848..882
score: 9.098
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 671..705
score: 10.019
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 741..775
score: 11.279
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 531..565
score: 11.488
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 645..808
e-value: 2.9E-46
score: 160.2
coord: 809..962
e-value: 4.4E-34
score: 120.2
coord: 457..631
e-value: 2.4E-52
score: 180.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 164..275
e-value: 3.0E-11
score: 45.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 368..456
e-value: 4.2E-23
score: 83.6
coord: 276..367
e-value: 1.0E-23
score: 85.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 284..525
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 279..452
coord: 762..945
coord: 384..505
coord: 457..636
coord: 209..382
coord: 605..803

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1917contigH-paniculata_contig1917:12544..19182 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1917.4814.1mRNA_H-paniculata_contig1917.4814.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1917 12494..20803 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1917.4814.1 ID=prot_H-paniculata_contig1917.4814.1|Name=mRNA_H-paniculata_contig1917.4814.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=973bp
MLDLRRTCTRATRRVYKQPDGCLSTTSLFMKPISSNNMVPLATMATPNKV
MFETAWVNPVRSMSMNRRRCKSHSSRSSLSHAEGGARRELGRVSFSAIPM
PTAEQAGENESAMPGTTGEKMSEGHASSGRRTKARGGENRAAPQHGADGT
GGGNFRSVAPSRSHTFINSIRKIANRDWQSVLRQLDAAERAEALLPTTEP
ASGEERPERALPPLHVYSTALSKLGKSGRWREALEVLERIQRLGGEPNIF
CINTAIDACNKSGRHDEAVRLVVRARESGLAMNVVSYNVAIRTYGFSRKW
EEAMALLREMEEANLEPNELTFGAAIMACSNGGQWEEALSLVYRMQAAGM
AGDVGIYSMVIKACRVAGQWRPAVALLEDARTWDVAPNVVNYNLAISCCS
QCGKTEEALAIMKDMPTFGVSPDVFTFNTVMASCATHGDWEKALGLLEEM
TGPGRFLTPDVVTYSSVMKACAKAGQWEQAVTLLRKMATMDVPPNLISYN
TAISACAAGCRWQEALELLREMPATAGISPDVTSYNSAITACARGLQWEE
AEALLREMPTVGITPDRISYNAAISACGNCGQGNRAMALLREMSASGLDP
EIIGYNTAISACGNSGNLERALDILREMHSVGVVPDEISYVSLMAACAFR
GDWKQALRLLREMPTAGIPLSVVSYTAAMAACASAGESEQASALLKEMLD
TDIIPDYRSYCAVISASGKSGRWEQAIDTLRQMPLDGFMPNEFCYNQAIT
ACGNAGRWENSLELFREMPEVEVPPSVFSYTAVISACGNCGEADQALDLL
REMSTPEVNIAPSAATYLAAMAACGNGGQWEQAIALLKEMGEAEVPLDVG
GYNVAIRACGESCQGARAVALLREMSTVGIEPTAVTYENVISACGSAGLW
EEAVELLREMSEVGLEADASCYLAAISACEGAGQKELAVELVKEAPSGKA
TDSARDSVSTDLSGSTAVGVTV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf