prot_H-paniculata_contig19153.4807.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19153.4807.1
Unique Nameprot_H-paniculata_contig19153.4807.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length60
Homology
BLAST of mRNA_H-paniculata_contig19153.4807.1 vs. uniprot
Match: D7G2S0_ECTSI (Ornithine decarboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S0_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 1.680e-19
Identity = 40/50 (80.00%), Postives = 46/50 (92.00%), Query Frame = 0
Query:   11 FHCGSGCSDAQAYPDALRVTRFVFDLAARQGVILTLLDIGGGFPGWDGSE 60
            FHCGSGC +AQAYP+AL V + VFDLAA++GV+LTLLDIGGGFPGWDGSE
Sbjct:  265 FHCGSGCQNAQAYPEALAVAKSVFDLAAQKGVMLTLLDIGGGFPGWDGSE 314          
BLAST of mRNA_H-paniculata_contig19153.4807.1 vs. uniprot
Match: A0A6H5JKK4_9PHAE (ODC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKK4_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 1.100e-18
Identity = 40/50 (80.00%), Postives = 44/50 (88.00%), Query Frame = 0
Query:   11 FHCGSGCSDAQAYPDALRVTRFVFDLAARQGVILTLLDIGGGFPGWDGSE 60
            FHCGSGC +AQAYP+AL V + VFDLA R+GV LTLLDIGGGFPGWDGSE
Sbjct:  692 FHCGSGCQNAQAYPEALAVAKSVFDLADRKGVKLTLLDIGGGFPGWDGSE 741          
BLAST of mRNA_H-paniculata_contig19153.4807.1 vs. uniprot
Match: A0A7S1AKA3_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AKA3_NOCSC)

HSP 1 Score: 66.2 bits (160), Expect = 3.100e-11
Identity = 31/47 (65.96%), Postives = 36/47 (76.60%), Query Frame = 0
Query:   11 FHCGSGCSDAQAYPDALRVTRFVFDLAARQGVILTLLDIGGGFPGWD 57
            FH GSGCS   A+  AL+  + VFD A+RQG+ LTLLDIGGGFPGWD
Sbjct:  555 FHVGSGCSQTGAFRSALQRAKAVFDEASRQGLSLTLLDIGGGFPGWD 601          
BLAST of mRNA_H-paniculata_contig19153.4807.1 vs. uniprot
Match: A0A2V3IYX3_9FLOR (Antizyme inhibitor 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYX3_9FLOR)

HSP 1 Score: 65.1 bits (157), Expect = 7.750e-11
Identity = 29/48 (60.42%), Postives = 38/48 (79.17%), Query Frame = 0
Query:   11 FHCGSGCSDAQAYPDALRVTRFVFDLAARQGVILTLLDIGGGFPGWDG 58
            FH GSGC+D ++Y  AL   RFVFD+A + G+ L++LDIGGGFPG+DG
Sbjct:  231 FHVGSGCNDVKSYVQALSDARFVFDMATQLGMSLSVLDIGGGFPGFDG 278          
BLAST of mRNA_H-paniculata_contig19153.4807.1 vs. uniprot
Match: A0A553RKE6_9TELE (Uncharacterized protein n=1 Tax=Danionella translucida TaxID=623744 RepID=A0A553RKE6_9TELE)

HSP 1 Score: 62.4 bits (150), Expect = 6.990e-10
Identity = 28/50 (56.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:   11 FHCGSGCSDAQAYPDALRVTRFVFDLAARQGVILTLLDIGGGFPGWDGSE 60
            FH GSGC+D ++Y  A+   R+VFDLA + G  +TLLDIGGGFPG D ++
Sbjct:  196 FHVGSGCTDPESYYQAISDARYVFDLATKLGFTMTLLDIGGGFPGSDDTK 245          
BLAST of mRNA_H-paniculata_contig19153.4807.1 vs. uniprot
Match: Q4VSR1_CARAU (Ornithine decarboxylase (Fragment) n=2 Tax=Cyprinoidei TaxID=30727 RepID=Q4VSR1_CARAU)

HSP 1 Score: 59.7 bits (143), Expect = 8.580e-10
Identity = 27/50 (54.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:   11 FHCGSGCSDAQAYPDALRVTRFVFDLAARQGVILTLLDIGGGFPGWDGSE 60
            FH GSGC D + Y  A+   R+VFD+ A  G  +TLLDIGGGFPG D ++
Sbjct:    6 FHVGSGCPDPETYSQAISDARYVFDMGAELGYNMTLLDIGGGFPGSDDAK 55          
BLAST of mRNA_H-paniculata_contig19153.4807.1 vs. uniprot
Match: A0A671N4L4_9TELE (Ornithine decarboxylase-like n=2 Tax=Sinocyclocheilus TaxID=75365 RepID=A0A671N4L4_9TELE)

HSP 1 Score: 62.0 bits (149), Expect = 9.530e-10
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:   11 FHCGSGCSDAQAYPDALRVTRFVFDLAARQGVILTLLDIGGGFPGWDGSE 60
            FH GSGC+D + Y  A+   RFVFD+ A  G  +TLLDIGGGFPG D ++
Sbjct:  196 FHVGSGCTDPETYSQAISDARFVFDMGAELGYNMTLLDIGGGFPGSDNTK 245          
BLAST of mRNA_H-paniculata_contig19153.4807.1 vs. uniprot
Match: A9V8S4_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V8S4_MONBE)

HSP 1 Score: 61.2 bits (147), Expect = 1.790e-9
Identity = 28/47 (59.57%), Postives = 34/47 (72.34%), Query Frame = 0
Query:   11 FHCGSGCSDAQAYPDALRVTRFVFDLAARQGVILTLLDIGGGFPGWD 57
            FH GSGC+DA A+ DA+   R VFD+A   GV L +LD+GGGFPG D
Sbjct:  261 FHVGSGCTDANAFADAVHRARQVFDMATELGVCLKILDVGGGFPGAD 307          
BLAST of mRNA_H-paniculata_contig19153.4807.1 vs. uniprot
Match: D9J2J2_ANGAU (Ornithine decarboxylase 1 (Fragment) n=1 Tax=Anguilla australis TaxID=7940 RepID=D9J2J2_ANGAU)

HSP 1 Score: 59.7 bits (143), Expect = 2.170e-9
Identity = 28/50 (56.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:   11 FHCGSGCSDAQAYPDALRVTRFVFDLAARQGVILTLLDIGGGFPGWDGSE 60
            FH GSGC+D + Y  A+   R VFD+ A  G  +TLLDIGGGFPG D S+
Sbjct:   68 FHVGSGCTDPETYSQAISDARCVFDMGAELGYNMTLLDIGGGFPGSDDSK 117          
BLAST of mRNA_H-paniculata_contig19153.4807.1 vs. uniprot
Match: A0A7S2L8W3_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2L8W3_9DINO)

HSP 1 Score: 60.8 bits (146), Expect = 2.310e-9
Identity = 31/47 (65.96%), Postives = 33/47 (70.21%), Query Frame = 0
Query:   11 FHCGSGCSDAQAYPDALRVTRFVFDLAARQGVILTLLDIGGGFPGWD 57
            FH GSGCS   A+  ALR  R VFD A RQG  +TLLDIGGGFPG D
Sbjct:  148 FHVGSGCSQRGAFRGALRRARAVFDEAERQGFAMTLLDIGGGFPGAD 194          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19153.4807.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2S0_ECTSI1.680e-1980.00Ornithine decarboxylase n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKK4_9PHAE1.100e-1880.00ODC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A7S1AKA3_NOCSC3.100e-1165.96Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A2V3IYX3_9FLOR7.750e-1160.42Antizyme inhibitor 2 n=1 Tax=Gracilariopsis chorda... [more]
A0A553RKE6_9TELE6.990e-1056.00Uncharacterized protein n=1 Tax=Danionella translu... [more]
Q4VSR1_CARAU8.580e-1054.00Ornithine decarboxylase (Fragment) n=2 Tax=Cyprino... [more]
A0A671N4L4_9TELE9.530e-1056.00Ornithine decarboxylase-like n=2 Tax=Sinocyclochei... [more]
A9V8S4_MONBE1.790e-959.57Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
D9J2J2_ANGAU2.170e-956.00Ornithine decarboxylase 1 (Fragment) n=1 Tax=Angui... [more]
A0A7S2L8W3_9DINO2.310e-965.96Hypothetical protein n=1 Tax=Brandtodinium nutricu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029066PLP-binding barrelGENE3D3.20.20.10coord: 3..60
e-value: 1.4E-13
score: 52.8
IPR029066PLP-binding barrelSUPERFAMILY51419PLP-binding barrelcoord: 9..55
IPR022644Orn/DAP/Arg decarboxylase 2, N-terminalPFAMPF02784Orn_Arg_deC_Ncoord: 11..57
e-value: 6.7E-11
score: 42.0
IPR031173Antizyme inhibitor 2PANTHERPTHR11482:SF4ANTIZYME INHIBITOR 2coord: 9..59
IPR002433Ornithine decarboxylasePANTHERPTHR11482ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASEcoord: 9..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19153contigH-paniculata_contig19153:2472..3824 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19153.4807.1mRNA_H-paniculata_contig19153.4807.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19153 2472..3826 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19153.4807.1 ID=prot_H-paniculata_contig19153.4807.1|Name=mRNA_H-paniculata_contig19153.4807.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=60bp
VQSKRFAASCFHCGSGCSDAQAYPDALRVTRFVFDLAARQGVILTLLDIG
GGFPGWDGSE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029066PLP-binding_barrel
IPR022644De-COase2_N
IPR031173Azin2
IPR002433Orn_de-COase