mRNA_H-paniculata_contig19148.4805.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig19148.4805.1
Unique NamemRNA_H-paniculata_contig19148.4805.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig19148.4805.1 vs. uniprot
Match: D8LMS0_ECTSI (SNF2-related domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMS0_ECTSI)

HSP 1 Score: 271 bits (694), Expect = 3.000e-82
Identity = 131/149 (87.92%), Postives = 142/149 (95.30%), Query Frame = 1 
Query:   49 LDPNDVVLEWTKEVPPQPVRAGATLARRLHPHQRDGLKVLWECLAGRGGYDGRGAILADEMGLGKTATAIALCTCVLRHRKAECRKAVVVCPSSLVKNWANEFRKWCPLGGGAVAIEQAGAAAAQLVADFKIGAAARYPILVISYELYR 495
            L P+ +VLEWT   PPQPV AGA+LARRLHPHQR+GLK+LWECLAGRGGY+GRGAILADEMGLGKTATAIALCTCVLRHR+AECRKAVV+CPSSLV NWANEFRKWCPLGGGAVA++QAGAAAAQLV+DFKIGAAARYPILVISYELYR
Sbjct:  255 LSPDGLVLEWTAGDPPQPVMAGASLARRLHPHQREGLKMLWECLAGRGGYEGRGAILADEMGLGKTATAIALCTCVLRHRRAECRKAVVICPSSLVGNWANEFRKWCPLGGGAVAVDQAGAAAAQLVSDFKIGAAARYPILVISYELYR 403
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BLAST of mRNA_H-paniculata_contig19148.4805.1 vs. uniprot
Match: A0A6H5JTI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI7_9PHAE)

HSP 1 Score: 243 bits (619), Expect = 1.270e-71
Identity = 123/149 (82.55%), Postives = 135/149 (90.60%), Query Frame = 1 
Query:   49 LDPNDVVLEWTKEVPPQPVRAGATLARRLHPHQRDGLKVLWECLAGRGGYDGRGAILADEMGLGKTATAIALCTCVLRHRKAECRKAVVVCPSSLVKNWANEFRKWCPLGGGAVAIEQAGAAAAQLVADFKIGAAARYPILVISYELYR 495
            L P  +VLEWT   PPQPV AGA+LARRL+PHQR+GLK+LWECLAGRGGY+GRGAILADEMGLGKTATAIALC CVLRHR+AEC KAVVVCPSSLV+NWANE +   P GGGAVA++QAGAAAAQLV+DFKIGAAARYPILVISYELYR
Sbjct:  258 LSPEGLVLEWTAGDPPQPVIAGASLARRLYPHQREGLKMLWECLAGRGGYEGRGAILADEMGLGKTATAIALCMCVLRHRRAECPKAVVVCPSSLVRNWANEVQSRGP-GGGAVAVDQAGAAAAQLVSDFKIGAAARYPILVISYELYR 405
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BLAST of mRNA_H-paniculata_contig19148.4805.1 vs. uniprot
Match: A0A196SG06_BLAHN (RAD54, DNA repair and recombination protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SG06_BLAHN)

HSP 1 Score: 107 bits (266), Expect = 8.300e-24
Identity = 63/138 (45.65%), Postives = 83/138 (60.14%), Query Frame = 1 
Query:  100 PVRAGATLARRLHPHQRDGLKVLWECLAGRGGYDGRGAILADEMGLGKTATAIALCTCVLRHRKAEC---RKAVVVCPSSLVKNWANEFRKWCPLGGGAVA---IEQAGAAAAQLVADFKIGAAARYPILVISYELYR 495
            PV     L +++ PHQ++GL  L+ C+ G GG++G G ILADEMGLGKT TAI+L    L            AVV CPSSLV+NW NEFRKW  LG   V    + + G  A + V DF + +  +  +L+ISYE+YR
Sbjct:  230 PVILDPALNQKMKPHQKEGLLFLYNCINGLGGFNGNGCILADEMGLGKTLTAISLIFTALTQSPWATPLITSAVVTCPSSLVENWGNEFRKW--LGRDKVRCLILSEKGEKAEEKVNDFVMQSGLKRVVLIISYEMYR 365
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BLAST of mRNA_H-paniculata_contig19148.4805.1 vs. uniprot
Match: A0A4D9CX44_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CX44_9STRA)

HSP 1 Score: 105 bits (263), Expect = 2.180e-23
Identity = 70/150 (46.67%), Postives = 85/150 (56.67%), Query Frame = 1 
Query:   85 EVPPQPVRAGATLARRLHPHQRDGLKVLWECLAGRGGYD--GRGAILADEMGLGKTATAIALCTCVLR-----HRKAECRKAVVVCPSSLVKNWANEFRKWCPLGGGAVAIEQA-GAA-----AAQLVADFKIGAAARYPILVISYELYR 495
            EVP +PV   A L R L PHQR+G+  LW CL GRG     GRGAILAD+MGLGKT   IAL   + R     HR A+  KAVVVCPSSL+  WA E +KW  +    + ++ A G A     A + V  F   +     +L ISYE YR
Sbjct:  515 EVPTKPVVLEAFLGRILRPHQREGVAFLWRCLTGRGQPSRMGRGAILADDMGLGKTLQTIALLWALTRQSPFQHRYADVEKAVVVCPSSLLNQWAAELKKWLQVRLSFMVVDSAMGKALGKGDAKEQVNTFCTSSGQHSTVLFISYEGYR 664
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BLAST of mRNA_H-paniculata_contig19148.4805.1 vs. uniprot
Match: A0A8C5Q6U1_9ANUR (RAD54 like n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5Q6U1_9ANUR)

HSP 1 Score: 104 bits (259), Expect = 7.030e-23
Identity = 69/150 (46.00%), Postives = 85/150 (56.67%), Query Frame = 1 
Query:   70 LEWTKEVPPQPVRAGATLARRLHPHQRDGLKVLWECLAGRGGYDGRGAILADEMGLGKTATAIALCTCVLRHR---KAECRKAVVVCPSSLVKNWANEFRKWCPLGGGAVAIEQAGAAAAQL---VADF--KIGAAARYPILVISYELYR 495
            L+  KE  P  V     L + L PHQR+G+K LWEC+ GR      G I+ADEMGLGKT   IAL   +LR     K E  K+VVVCPSSLVKNW NE  KW  LGG    +   G +  ++   +A F  + G     PIL+ISYE +R
Sbjct:  130 LKVDKEKIPVHVVVDPVLVKVLRPHQREGVKFLWECVTGRRIPGSHGCIMADEMGLGKTLQCIALMWTLLRQSPDAKHEIEKSVVVCPSSLVKNWYNEVGKW--LGGAIQPLAIDGGSKEEIDRKLAGFMSQHGVRVPSPILIISYETFR 277
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BLAST of mRNA_H-paniculata_contig19148.4805.1 vs. uniprot
Match: A0A812VS04_9DINO (RAD54B protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812VS04_9DINO)

HSP 1 Score: 103 bits (258), Expect = 1.000e-22
Identity = 61/138 (44.20%), Postives = 77/138 (55.80%), Query Frame = 1 
Query:  100 PVRAGATLARRLHPHQRDGLKVLWECLAGRGGYDGRGAILADEMGLGKTATAIALCTCVLRHRKAEC---RKAVVVCPSSLVKNWANEFRKWCPLGGGA---VAIEQAGAAAAQLVADFKIGAAARYPILVISYELYR 495
            PV     LA  L PHQR+G+K LWEC AG     G G ILADEMGLGKT   I L   +L+          K ++ CPS+LV NW  EF KW  LG       A+ + G  A  +V DF  G ++ YP+L++SYE+ R
Sbjct:  633 PVVVDPHLANVLRPHQREGVKFLWECCAGMRSIKGEGCILADEMGLGKTLQTITLVYTMLKQSVTGAGLASKVIIACPSTLVGNWKKEFGKW--LGSTRCKPAAVTKTGKVAEGVVHDFVHGRSSMYPVLILSYEMCR 768
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BLAST of mRNA_H-paniculata_contig19148.4805.1 vs. uniprot
Match: A0A2R7WYK7_ONCFA (Helicase ATP-binding domain-containing protein (Fragment) n=1 Tax=Oncopeltus fasciatus TaxID=7536 RepID=A0A2R7WYK7_ONCFA)

HSP 1 Score: 99.8 bits (247), Expect = 1.120e-22
Identity = 62/130 (47.69%), Postives = 79/130 (60.77%), Query Frame = 1 
Query:  133 LHPHQRDGLKVLWECLAGRGGYDGRGAILADEMGLGKTATAIALCTCVLR---HRKAECRKAVVVCPSSLVKNWANEFRKWCPLGG--GAVAIEQAGAAAAQ-LVADFKIGAAAR---YPILVISYELYR 495
            L PHQR+G+K ++EC+ G    +  G I+ADEMGLGKT   I L   +L+   H K E  KA++V PSSLVKNW NE +KW  LGG   A+A+E  G    +  V DF      R   +PILVISYE +R
Sbjct:    5 LRPHQREGVKFMYECVTGVRIENAYGCIMADEMGLGKTLQCITLMWTLLKQSPHAKPEIDKAIIVAPSSLVKNWCNEIQKW--LGGRVNAIAVEGGGTKVVEGQVRDFMSAPPGRRNTHPILVISYETFR 132
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BLAST of mRNA_H-paniculata_contig19148.4805.1 vs. uniprot
Match: Q6NVL9_XENTR (DNA repair and recombination protein RAD54-like n=4 Tax=Xenopus TaxID=8353 RepID=Q6NVL9_XENTR)

HSP 1 Score: 103 bits (257), Expect = 1.300e-22
Identity = 71/165 (43.03%), Postives = 91/165 (55.15%), Query Frame = 1 
Query:   37 AAVILDPNDV----VLEWTKEVPPQPVRAGATLARRLHPHQRDGLKVLWECLAGRGGYDGRGAILADEMGLGKTATAIALCTCVLRHR---KAECRKAVVVCPSSLVKNWANEFRKWCPLGGGAVAIEQAGAAAAQL---VADFKIGAAARYP--ILVISYELYR 495
            A V+ +P  +    +L+  KE  P  V     L + L PHQR+G+K LWEC+ GR      G+I+ADEMGLGKT   I L   +LR     K E  KAVVVCPSSLVKNW NE  KW  LGG    +   G +  ++   ++ F      R P  IL+ISYE +R
Sbjct:  115 ALVLYEPPQLSAHDLLKVDKEKVPVHVVVDPVLGKVLRPHQREGVKFLWECVTGRRISGSHGSIMADEMGLGKTLQCITLIWTLLRQSPDAKPEIEKAVVVCPSSLVKNWYNEVSKW--LGGRIQPLAIDGGSKEEIDKKLSGFMNQHGMRVPSAILIISYETFR 277
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BLAST of mRNA_H-paniculata_contig19148.4805.1 vs. uniprot
Match: UPI001C349E5F ((large yellow croaker) hypothetical protein n=1 Tax=Larimichthys crocea TaxID=215358 RepID=UPI001C349E5F)

HSP 1 Score: 101 bits (251), Expect = 1.460e-22
Identity = 69/158 (43.67%), Postives = 90/158 (56.96%), Query Frame = 1 
Query:   46 ILDPNDVVLEWTKEVPPQPVRAGATLARRLHPHQRDGLKVLWECLAGRGGYDGRGAILADEMGLGKTATAIALCTCVLRHR---KAECRKAVVVCPSSLVKNWANEFRKWCPLGGGAVAIEQAGAAAAQL---VADF--KIGAAARYPILVISYELYR 495
            IL  +D++ +  KE  P  V     L + L PHQR+G+K LWEC+ GR   +  G I+ADEMGLGKT   IAL   +LR     K E  KA+VV PSSLV+NW NE  KW  LGG    +   G +   +   + +F  + G  A  PIL+ISYE +R
Sbjct:  121 ILSAHDLI-KAEKEKLPVHVVVDPVLGKVLRPHQREGVKFLWECVTGRRISESYGCIMADEMGLGKTLQCIALMWTLLRQSPDAKPEIDKAIVVSPSSLVRNWYNEVGKW--LGGRVTPVAIDGGSKDDIDRQLVNFISQRGLRAPTPILIISYETFR 275
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BLAST of mRNA_H-paniculata_contig19148.4805.1 vs. uniprot
Match: A0A7S2JIU9_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2JIU9_9DINO)

HSP 1 Score: 97.8 bits (242), Expect = 1.640e-22
Identity = 60/130 (46.15%), Postives = 81/130 (62.31%), Query Frame = 1 
Query:  121 LARRLHPHQRDGLKVLWECLAGRGGYDGRGAILADEMGLGKTATAIALCTCVLRHR----KAECRKAVVVCPSSLVKNWANEFRKWCPLGGGAVAIEQAGAAAAQ-LVADFKIGAAARYPILVISYELYR 495
            L+R L  HQR GL+ L++CL G   Y+G G ILAD+MGLGKT  ++A+   +L       KA CRKAV++CP+SLVKNWA EF KW       VAI  +G AA +  +  F+   +  + IL+ SYE +R
Sbjct:   39 LSRVLREHQRVGLQFLYDCLMGLREYEGFGCILADDMGLGKTLQSVAVIWTLLTQGGAGGKAACRKAVIICPASLVKNWAAEFDKWLKGRCKYVAIAVSGTAAVRGTLMTFR--GSYEHKILIASYETFR 166
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19148.4805.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMS0_ECTSI3.000e-8287.92SNF2-related domain-containing protein n=1 Tax=Ect... [more]
A0A6H5JTI7_9PHAE1.270e-7182.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A196SG06_BLAHN8.300e-2445.65RAD54, DNA repair and recombination protein n=1 Ta... [more]
A0A4D9CX44_9STRA2.180e-2346.67Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A8C5Q6U1_9ANUR7.030e-2346.00RAD54 like n=1 Tax=Leptobrachium leishanense TaxID... [more]
A0A812VS04_9DINO1.000e-2244.20RAD54B protein (Fragment) n=1 Tax=Symbiodinium sp.... [more]
A0A2R7WYK7_ONCFA1.120e-2247.69Helicase ATP-binding domain-containing protein (Fr... [more]
Q6NVL9_XENTR1.300e-2243.03DNA repair and recombination protein RAD54-like n=... [more]
UPI001C349E5F1.460e-2243.67(large yellow croaker) hypothetical protein n=1 Ta... [more]
A0A7S2JIU9_9DINO1.640e-2246.15Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19148contigH-paniculata_contig19148:625..4686 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score273.1
Seed ortholog evalue8.6e-71
Seed eggNOG ortholog2880.D8LMS0
Preferred nameRAD54B
KEGG koko:K06811,ko:K10779,ko:K10875,ko:K10877
KEGG Pathwayko03440,ko05226,map03440,map05226
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000280,GO:0000724,GO:0000725,GO:0000819,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003690,GO:0003724,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007127,GO:0007131,GO:0007135,GO:0007275,GO:0007568,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008340,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0010259,GO:0015616,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022402,GO:0022414,GO:0030491,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033554,GO:0034641,GO:0035825,GO:0042221,GO:0042493,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0045132,GO:0045144,GO:0046483,GO:0048285,GO:0048856,GO:0050896,GO:0051276,GO:0051321,GO:0051716,GO:0061982,GO:0061983,GO:0070035,GO:0070192,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0098813,GO:0140013,GO:0140097,GO:0140098,GO:1901360,GO:1901363,GO:1903046
EggNOG free text desc.DNA repair and recombination protein
EggNOG OGsCOG0553@1,KOG0390@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03000,ko03036,ko03400,ko04516
Exons3
Model size498
Cds size498
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19148.4805.1prot_H-paniculata_contig19148.4805.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig19148 625..4686 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929464.3070168-CDS-H-paniculata_contig19148:624..7681622929464.3070168-CDS-H-paniculata_contig19148:624..768Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19148 625..768 -
1691480872.8290257-CDS-H-paniculata_contig19148:624..7681691480872.8290257-CDS-H-paniculata_contig19148:624..768Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19148 625..768 -
1622929464.3213387-CDS-H-paniculata_contig19148:2406..25661622929464.3213387-CDS-H-paniculata_contig19148:2406..2566Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19148 2407..2566 -
1691480872.8398218-CDS-H-paniculata_contig19148:2406..25661691480872.8398218-CDS-H-paniculata_contig19148:2406..2566Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19148 2407..2566 -
1622929464.335708-CDS-H-paniculata_contig19148:4492..46861622929464.335708-CDS-H-paniculata_contig19148:4492..4686Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19148 4493..4686 -
1691480872.848547-CDS-H-paniculata_contig19148:4492..46861691480872.848547-CDS-H-paniculata_contig19148:4492..4686Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19148 4493..4686 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig19148.4805.1

>prot_H-paniculata_contig19148.4805.1 ID=prot_H-paniculata_contig19148.4805.1|Name=mRNA_H-paniculata_contig19148.4805.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=166bp
GPSGGGGSGTAAAAVILDPNDVVLEWTKEVPPQPVRAGATLARRLHPHQR
DGLKVLWECLAGRGGYDGRGAILADEMGLGKTATAIALCTCVLRHRKAEC
RKAVVVCPSSLVKNWANEFRKWCPLGGGAVAIEQAGAAAAQLVADFKIGA
AARYPILVISYELYR*
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mRNA from alignment at H-paniculata_contig19148:625..4686-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig19148.4805.1 ID=mRNA_H-paniculata_contig19148.4805.1|Name=mRNA_H-paniculata_contig19148.4805.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4062bp|location=Sequence derived from alignment at H-paniculata_contig19148:625..4686- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTCCTTCAGGTGGCGGCGGCAGCGGTACTGCGGCGGCAGCGGTGATCTT
GGACCCGAACGATGTGGTGCTGGAGTGGACCAAGGAGGTACCGCCTCAGC
CTGTTCGAGCTGGCGCCACGCTGGCACGCAGGCTGCACCCGCACCAGCGC
GATGGCTTGAAAGTGCTGTGGGAGTGCCTTGCTGGGCGGGGAGGGTGAGA
CAGTGATGCCGAAATTTTATTGTGTCGCGTAGTATTCTTTGTTGGGAAAT
ACGGCGCACGTACATGATGACGGAGGACGTTGCATGGGATAAATGGACTT
ACTGCTCGTTGTTCTCGGTCGTGGTGTTGTTGGGAAAAAGGAAAGCGACG
CAAATCGTTAGATTGCGTCATCTACTTTGGGCTCTCACTTCTTGACCGGG
GCGCATTTTTTTTAAAGCCTGGGTGTTACCTGCACGGGTCGACCACTGTG
ATTTTCGGCCGAAGGCTGTTGTTCATGCCGATGAGTCAACCATTTGTCTC
TTTAGAGGGGACGATGCGCCGCTCCTGTCATTTTTTTTAGAGGGGACGAT
GCGCCGCTCCTGTCATTTTTCAGGATATCTCGCCATATTCCGACGAGTCA
ACCACTGCTCTTTTCAGAGGGCATAAATCAACCTACACAAGCGCCCCTAT
TGTCATTTTCCAGCATATCTCGCCATATTCCGACGAGTCACTTAATGCTC
TTTCTAGAGCGCCCTTGTTGCCATTTTCTGGAATATGACGCCATACCAGG
TATATTCTGGTTGGATGTGTTTCTATGAGGCTGAATACCCACGACAGTGC
TCCTAATGAAGCTTTCCTGCGTGAACGAACAGCTGCGAATAGTTCCGTAC
TGGAGCATTTCTCTGGCTGAATACACTGCAAATTGACTCTTAGTGGGGCG
TTTGTGTGGTTGAATCTAATTGCAAATGGTTTTTCCCTGAAAAATTACTT
ACATATTATTCGTATTTCACCTAGACAAATAATTCACCTTCCGGACAAAT
ACGAATACTCGGCGTAATCGCCACGAAAAATTAATCATTATTCGCCTGAG
TTTCAGGATGAACTCGTGTATTCTATGTTCCCCGGAGCATCCACGACTGC
TAATTATACTCGTAAATCGAATGGAGAGGGGTAGATACTTCATTCTATGT
GTCCGTCCGCTCATTCGGAAACTCAGGCGAATATTTTTTTACTTTTCGTG
GCGAATACGTCAATTTTTCGTGTTTCTCCAGGTGGTTAAATAATTACAGC
CCTCCGATAGTTACGAATGCTGTACTCATGTACGTCCAGGGGGCGAAAAC
AATATGCTCTGGCTTTTACCTCGCATATACAAATAAAAACTCATAATATA
TGCTATTTTGTGCGAGCGATGATGAACACATATGGTATTTCTGTCTCATA
AGTCTCCGCGATTAAGGTAATCTCGCAGTATCTTTTGTAATTTTGGGATA
CATAAAAAACCGAGCATACAGTTTGAAAGCCCTGGATATCAGCTATCTTT
TTCATAACAGAAAAATATGTATATAATAATCCGATGGGGAATGATAAAAA
TTTACGCAAAATTCATGGACAAGACGCAACTCGAGTTAAGACGGTCCGGT
TTAGGATGGGTCCAGTCGGTTCTGTCACTAAACCACAATCCTACATATTT
TCTATATTGTGGTTATTTTAATAAGACAGTTTTCGATTAAAGGTGAGCTT
TTTTGGTTTGTCATCACTCCACCCAGCCTTTAAATTAAGGTACTCACTCT
GTCCGTGCTTTGCCGTTGTGATGTGGATACCTATCTATACTAAGCAGGCA
CAATTTATCAACCGTTGAAAAAAAAACTAGATATAAAAGTACATGGTGTA
TGTGTGCTTTGTAAACTTAAAAAAGGAAAACTAGAGAAAAGAATAGATGT
CCTTGCGTCACATTCCAAGTTTTCATGTGTTTTTTTTGTTTTGTTTTCTT
ATTATTATTACTTATTTACCCTTCTTTTTTTTTTCTATGGTTATTATTTT
CATTATCGTTATCGTTACCGTTATCGTCACCGTTACCAGGATAATCATTA
TTCCTATTATTACTCTATTTTAGTCATTTTCCACAAAACCCTTTCCCTCT
CTCTCTCTCTCTCTGCATAGATACGACGGCCGCGGGGCAATCTTGGCGGA
TGAAATGGGTCTCGGCAAGACAGCAACGGCTATCGCTCTCTGCACCTGCG
TGCTGCGCCACCGCAAAGCCGAGTGTCGCAAAGCCGTAGTTGTCTGCCCA
TCCTCGCTCGTGAAGAACTGGGCCAACGAGGTATGTACCACTGCAACAAT
AACACAACAGTATATACGATCTTGCCAAAAAAAAAACGCCTCCACTGAGT
GTGTTTTTTCCCTTTGGTTTTTAATGTAATATCTTGCCCCTTATCAAATC
TGTGAACACATCCTCATGTCATCTCTTAATCCCCGAAAAAAAAACAGTGA
GCGGAAAAAATGGAGTCAGCTTATCTAATCACTGAAATTAAGTCACGCAA
GAAAGTGAATATACACGGAACTGAGAACGATCATATTTTATGCCCCAAGC
TGATTGCACGCGCAATGCCTTGTTCATGTGCTACTACTGCCCTACCGTCT
TTTGTAAACCTGCAGATTATCTTTTTTTTCTTTTTCTTTTTTTTGGTGTA
ATGGTTGCTGTGGGCATGGCACCGATTAGAACGGCGCATGATAGTTTTTC
GCTCGAAATTCTCATGTCTCATGTTGCGGGCTGAAATACGTCGTGTTTTT
TTCACGTAATCACGATTGTTGAATGTTTTCAACTAGACAAGAAAAAATAA
AAAAAAAAGGATCATCGTTTATCCATATATACATGTGGCATGGTTGGTCC
ATCTGCCATGGTCCAATTACTGTTTTTTTGCACTTGAATACCGTAACAAG
CTTTGATGCGTCACACCCCTCTGAAATTTTTTCTCAGACTCGATTTTCTC
GGGCAAAAACAGTGCTCTCGTTACAGTAGTACACCGGTAGTGGTACCGTT
GAAAAGATCTCGTCGAGATCTTTCCATAGGCCGGCCCCTGCTGTTTCGAC
AGTGAGTGTTTTCTCGAGAAAATCGGGTGTGGAAACAAAAACAATATCAA
GGCGTGCGATGTCAAAGGGTGTTATGGCAAGGAAGTAAGGGAGTAAAGCA
CTAGGTTTCGTCCCGAGATCGGGGTGTGGGACGAAAGAAACACGGTCGCA
GGGAGGTGCAGGAATTCTGGCGTATACCGGGGCACAGCGGAGTATGACCT
AGTGTGTGTATGTCTGTTGTGGGATAGTGGACGCCTTAGATGGCTTGACC
CTTACACCTACCTCCATAGTGTACCGTATTCCTTAAAATCTCTTATGTTG
TAAAGCAAGATTCGAAGTGATTTCGTGCCGTTCGTTTATTATCGACCCTC
TTTCACGAACCAAGTTTGCCTCACTAACCAGCCCTCTAAAGCAGGGCTGC
TCAGGATTATGGGCGACGCGTCAACCCAGGGTTGGCACTGACAGTACCGC
TATAGCCAGCTAATACAAGAGACCAGACCATTGCCAAGGACTACATCTAC
CACCCAGCAGTCCCGTACCTAGAGTATTGTACAGCATAATCAGTAACAGA
GGACACAACAACCTACGTGTGTGAGATAGTCCGCAATTCCACTGCAGATA
TTATGGCATATTTGCCGTATGTACTCTCGTCATGTTTATATATGACAGTG
AGTGGCCGTTAACGAAATATACTTGAATTTGATTGGTCTTTTTACGATAT
GATTTGTCGTTTTACGAGGCCCGGCCTTTGCTTGAACGACCACCCGTCCG
TCTCGCCGAACGCACGCGCTGCTCGCGCTTTTCGTCGCATATACTATTCT
ACTATACGTGACGACTCTACTGCACGGCTGGCATGATATTTTTCGGCACT
ATCCTATTTATACCCTAGTTCCGGAAATGGTGCCCTCTAGGCGGAGGAGC
GGTGGCGATAGAGCAGGCAGGGGCTGCGGCCGCTCAGCTCGTCGCGGACT
TCAAAATCGGAGCCGCTGCACGCTACCCCATCCTTGTGATCAGCTACGAG
TTGTACAGGTAA
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Coding sequence (CDS) from alignment at H-paniculata_contig19148:625..4686-

>mRNA_H-paniculata_contig19148.4805.1 ID=mRNA_H-paniculata_contig19148.4805.1|Name=mRNA_H-paniculata_contig19148.4805.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=996bp|location=Sequence derived from alignment at H-paniculata_contig19148:625..4686- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTCCTTCAGGTGGCGGCGGCAGCGGTACTGCGGCGGCAGCGGTGATCTT
GGACCCGAACGATGTGGTGCTGGAGTGGACCAAGGAGGTACCGCCTCAGC
CTGTTCGAGCTGGCGCCACGCTGGCACGCAGGCTGCACCCGCACCAGCGC
GATGGCTTGAAAGTGCTGTGGGAGTGCCTTGCTGGGCGGGGAGGGGTCCT
TCAGGTGGCGGCGGCAGCGGTACTGCGGCGGCAGCGGTGATCTTGGACCC
GAACGATGTGGTGCTGGAGTGGACCAAGGAGGTACCGCCTCAGCCTGTTC
GAGCTGGCGCCACGCTGGCACGCAGGCTGCACCCGCACCAGCGCGATGGC
TTGAAAGTGCTGTGGGAGTGCCTTGCTGGGCGGGGAGGATACGACGGCCG
CGGGGCAATCTTGGCGGATGAAATGGGTCTCGGCAAGACAGCAACGGCTA
TCGCTCTCTGCACCTGCGTGCTGCGCCACCGCAAAGCCGAGTGTCGCAAA
GCCGTAGTTGTCTGCCCATCCTCGCTCGTGAAGAACTGGGCCAACGAGAT
ACGACGGCCGCGGGGCAATCTTGGCGGATGAAATGGGTCTCGGCAAGACA
GCAACGGCTATCGCTCTCTGCACCTGCGTGCTGCGCCACCGCAAAGCCGA
GTGTCGCAAAGCCGTAGTTGTCTGCCCATCCTCGCTCGTGAAGAACTGGG
CCAACGAGTTCCGGAAATGGTGCCCTCTAGGCGGAGGAGCGGTGGCGATA
GAGCAGGCAGGGGCTGCGGCCGCTCAGCTCGTCGCGGACTTCAAAATCGG
AGCCGCTGCACGCTACCCCATCCTTGTGATCAGCTACGAGTTGTACAGGT
AATTCCGGAAATGGTGCCCTCTAGGCGGAGGAGCGGTGGCGATAGAGCAG
GCAGGGGCTGCGGCCGCTCAGCTCGTCGCGGACTTCAAAATCGGAGCCGC
TGCACGCTACCCCATCCTTGTGATCAGCTACGAGTTGTACAGGTAA
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