prot_H-paniculata_contig19137.4801.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19137.4801.1
Unique Nameprot_H-paniculata_contig19137.4801.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length195
Homology
BLAST of mRNA_H-paniculata_contig19137.4801.1 vs. uniprot
Match: D8LKA1_ECTSI (eIF-2B GDP-GTP exchange factor subunit epsilon n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKA1_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 1.350e-57
Identity = 147/194 (75.77%), Postives = 162/194 (83.51%), Query Frame = 0
Query:    1 MRKDFVANEAANQELGNKILAHVVPDAEASFAVRVHDFRLYNEVSRDVISRWIYPLVPDNATSGGVQTHYTYERGCKYKATGVNLHRSVKVGNGVVIGADVTVGENSEIKRSVIGXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGAVLASRAMAKSHADRCGAVVKAGXXXXXXXXXXXXXXXXKGVRLQEFTR 194
            +R+ FVA EAAN ELGNKILAHVVPDA ASFAVRVHDFRLY+EV RDVI RW+YPLVPDNAT+GGVQT YTY R C YKA GVNL RSV++GNGVVIGADVTVGEN+ I+RSVI XXXXXXXXXXXXXXXXXXXXXXXXXXX+ GA++ASRAM K+ A R GA+V   XXXXXXXX        +GV L EFTR
Sbjct:  144 IRQHFVAYEAANHELGNKILAHVVPDAGASFAVRVHDFRLYHEVCRDVILRWMYPLVPDNATTGGVQTQYTYSRVCNYKAPGVNLPRSVRLGNGVVIGADVTVGENTVIERSVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGAIVASRAMTKTPAARGGAIVXXXXXXXXXXXLGPDTIVGEGVHLAEFTR 337          
BLAST of mRNA_H-paniculata_contig19137.4801.1 vs. uniprot
Match: A0A835YX04_9STRA (eIF-2B GDP-GTP exchange factor subunit epsilon n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX04_9STRA)

HSP 1 Score: 103 bits (256), Expect = 4.510e-22
Identity = 59/119 (49.58%), Postives = 70/119 (58.82%), Query Frame = 0
Query:    1 MRKDFVANEAANQELGNKILAHVVPDAEASFAVRVHDFRLYNEVSRDVISRWIYPLVPDNATSGGVQTHYTY------------ERGCKYKATGVNLHRSVKVGNGVVIGADVTVGENS 107
            +R+ FV NE AN ELGNKI+AH+V   E  ++ RV D RLY+ VSRD+I RW YPLVPDNA S                     +RG  Y+  GV L RSV VG G VIG DV VGE +
Sbjct:  244 LRQHFVTNEVANVELGNKIMAHIVGPRE--YSARVEDLRLYHAVSRDIIRRWTYPLVPDNAVSSTSXXXXXXXXXXXSACALRAQRGYVYRHRGVTLPRSVSVGAGTVIGPDVAVGEGA 360          
BLAST of mRNA_H-paniculata_contig19137.4801.1 vs. uniprot
Match: A0A2R5GM02_9STRA (eIF-2B GDP-GTP exchange factor subunit epsilon n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GM02_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 8.610e-20
Identity = 51/115 (44.35%), Postives = 72/115 (62.61%), Query Frame = 0
Query:    1 MRKDFVANEAANQELGNKILAHVVPDAEASFAVRVHDFRLYNEVSRDVISRWIYPLVPDNATSGGVQTHYTYERGCKYKATGVNLHRSVKVGNGVVIGADVTVGENSEIKRSVIG 115
            +R+D+V NE  N ELG +I AH +  +++ +A RV  FR Y+ +SRDV+ RW+YPLVPD A     +T Y  ERG +Y+  GV + RS  +G   VIGA   + E + I  SV+G
Sbjct:  255 IRRDYVRNEVQNHELGYRIHAHELT-SQSDYACRVRCFRTYDAISRDVVRRWLYPLVPD-ANWASEETAYALERGLRYRDEGVRVGRSSVIGQSCVIGAGSEIDEGATITTSVLG 367          
BLAST of mRNA_H-paniculata_contig19137.4801.1 vs. uniprot
Match: A0A8K1CIZ5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIZ5_PYTOL)

HSP 1 Score: 96.3 bits (238), Expect = 1.150e-19
Identity = 49/115 (42.61%), Postives = 66/115 (57.39%), Query Frame = 0
Query:    1 MRKDFVANEAANQELGNKILAHVVPDAEASFAVRVHDFRLYNEVSRDVISRWIYPLVPDNATSGGVQTHYTYERGCKYKATGVNLHRSVKVGNGVVIGADVTVGENSEIKRSVIG 115
            +R+DF  NE  N ELG K    +V D    FA RV D R Y  +SR ++ RW++P+VPDN   G   T+YTY RG  YK   V L R+  V    ++GA  T G+++ I +S IG
Sbjct:  259 LRRDFFHNEVQNYELGKKFFVKIVTD---EFAARVMDPRTYGGISRAILQRWVFPMVPDNNYLGSDSTNYTYHRGMVYKDDNVTLSRTCAVQRESILGAGTTCGDHTTITKSAIG 370          
BLAST of mRNA_H-paniculata_contig19137.4801.1 vs. uniprot
Match: A0A484EBE6_BRELC (W2 domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EBE6_BRELC)

HSP 1 Score: 93.2 bits (230), Expect = 1.280e-18
Identity = 49/116 (42.24%), Postives = 69/116 (59.48%), Query Frame = 0
Query:    1 MRKDFVANEAANQELGNKILAHVVPDAEASFAVRVHDFRLYNEVSRDVISRWIYPLVPD-NATSGGVQTHYTYERGCKYKATGVNLHRSVKVGNGVVIGADVTVGENSEIKRSVIG 115
            +R+DF+ NE  N ELG K  A VV D    FA RV D R Y  VS+ ++ RW++P+VPD N    G  TH+ Y RG +YK   V+L R+  +    ++GA  TV E++ + +S IG
Sbjct:  119 LRRDFLHNEVQNYELGKKFFAKVVTDG---FAARVMDPRTYAGVSKAILQRWLFPMVPDANYLGAGQVTHFEYLRGMRYKDANVSLARTCDIQRECILGAGTTVAEHARVLKSAIG 231          
BLAST of mRNA_H-paniculata_contig19137.4801.1 vs. uniprot
Match: A0A0P1AK76_PLAHL (Translation initiation factor eif-2b subunit n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AK76_PLAHL)

HSP 1 Score: 93.2 bits (230), Expect = 1.320e-18
Identity = 51/116 (43.97%), Postives = 66/116 (56.90%), Query Frame = 0
Query:    1 MRKDFVANEAANQELGNKILAHVVPDAEASFAVRVHDFRLYNEVSRDVISRWIYPLVPD-NATSGGVQTHYTYERGCKYKATGVNLHRSVKVGNGVVIGADVTVGENSEIKRSVIG 115
            +R+DF+ NE  N ELG K  A VV      FA RV D R Y  VSR ++ RW++P+VPD N       T Y Y RG +YK T V L R+  +    +IG   T+GE S + +SVIG
Sbjct:  235 LRRDFLHNEVQNYELGKKFFAKVVTQ---EFAARVMDPRTYAGVSRAILQRWVFPMVPDANYLGTSATTQYVYLRGMRYKDTNVTLARTCDIQQECIIGTCTTIGEYSRVHKSVIG 347          
BLAST of mRNA_H-paniculata_contig19137.4801.1 vs. uniprot
Match: U9SM16_RHIID (eIF-2B GDP-GTP exchange factor subunit epsilon n=9 Tax=Rhizophagus TaxID=1129544 RepID=U9SM16_RHIID)

HSP 1 Score: 87.8 bits (216), Expect = 9.800e-17
Identity = 49/114 (42.98%), Postives = 66/114 (57.89%), Query Frame = 0
Query:    1 MRKDFVANEAANQELGNKILAHVVPDAEASFAVRVHDFRLYNEVSRDVISRWIYPLVPDNATSGGVQTHYTYERGCKYKATGVNLHRSVKVGNGVVIGADVTVGENSEIKRSVI 114
            +RKDFV     +  LG  I  H+V DA   +A RV D + Y+ +S+DV+SRW YP+VPD+    G    Y Y RG  YK   V+L RS  +G  V+IG+   + EN +I  SVI
Sbjct:  245 IRKDFVYGILTSDLLGKTIYCHIVKDA---YAARVRDLQTYDAISKDVLSRWTYPIVPDSNLQEG--DSYEYMRGQIYKEQNVSLSRSCVLGEKVIIGSGTEIAENVKITNSVI 353          
BLAST of mRNA_H-paniculata_contig19137.4801.1 vs. uniprot
Match: A0A2D4CIJ8_PYTIN (eIF-2B GDP-GTP exchange factor subunit epsilon n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CIJ8_PYTIN)

HSP 1 Score: 87.0 bits (214), Expect = 1.860e-16
Identity = 44/112 (39.29%), Postives = 68/112 (60.71%), Query Frame = 0
Query:    1 MRKDFVANEAANQELGNKILAHVVPDAEASFAVRVHDFRLYNEVSRDVISRWIYPLVPDNATSGGVQTHYTYERGCKYKATGVNLHRSVKVGNGVVIGADVTVGENSEIKRS 112
            +R+DF+ NE  N ELG K  A +V D    FA RV D R Y+ +SR ++ RW++PLVPDN   G V + YTY RG  Y+   V++ R+  +    ++GA   +G+ + +++S
Sbjct:  272 LRQDFLHNEVQNYELGKKFFAKIVTD---DFAARVLDPRTYSGISRAILQRWVFPLVPDNNYLG-VASQYTYHRGMVYRDHDVSVSRTCALQRECIVGAGTRIGDGTVVRKS 379          
BLAST of mRNA_H-paniculata_contig19137.4801.1 vs. uniprot
Match: A0A397TCJ0_9GLOM (eIF-2B GDP-GTP exchange factor subunit epsilon n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TCJ0_9GLOM)

HSP 1 Score: 86.3 bits (212), Expect = 3.330e-16
Identity = 48/113 (42.48%), Postives = 65/113 (57.52%), Query Frame = 0
Query:    1 MRKDFVANEAANQELGNKILAHVVPDAEASFAVRVHDFRLYNEVSRDVISRWIYPLVPDNATSGGVQTHYTYERGCKYKATGVNLHRSVKVGNGVVIGADVTVGENSEIKRSV 113
            +RKDFV     +  LG  I  H+V DA   +A RV D + Y+ +S+DV+SRW YP+VPD+    G    Y Y RG  YK   V+L RS  +G  V+IG+   + EN +I  SV
Sbjct:  245 IRKDFVYGILTSDLLGKTIYCHIVKDA---YAARVRDLQTYDAISKDVLSRWTYPIVPDSNLQEG--DSYEYMRGQIYKEQNVSLSRSCVLGEKVIIGSGTKIAENVKITNSV 352          
BLAST of mRNA_H-paniculata_contig19137.4801.1 vs. uniprot
Match: A0A166N8E7_9AGAM (eIF-2B GDP-GTP exchange factor subunit epsilon n=1 Tax=Fibularhizoctonia sp. CBS 109695 TaxID=436010 RepID=A0A166N8E7_9AGAM)

HSP 1 Score: 84.7 bits (208), Expect = 1.170e-15
Identity = 53/117 (45.30%), Postives = 67/117 (57.26%), Query Frame = 0
Query:    1 MRKDFVANEAANQELGNKILAHVVPDAEASFAVRVHDFRLYNEVSRDVISRWIYPLVPDNATSGGVQTHYTYERGCKY--KATGVNLHRSVKVGNGVVIGADVTVGENSEIKRSVIG 115
            +RKDFV     +  L   I  +V  D    +A RV D R Y+ VS+D++SRW +PLVPD+    G    Y Y RG +Y  K   V L RS KVGN  +IGA  TV +N+EI  SVIG
Sbjct:  246 IRKDFVHGILTSDLLMKNIYCYVAKDG---YAARVEDTRSYDSVSKDILSRWTFPLVPDDNHPSGHS--YEYLRGNRYIAKDNSVVLSRSCKVGNNTLIGAHTTVHDNAEIIASVIG 357          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19137.4801.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKA1_ECTSI1.350e-5775.77eIF-2B GDP-GTP exchange factor subunit epsilon n=2... [more]
A0A835YX04_9STRA4.510e-2249.58eIF-2B GDP-GTP exchange factor subunit epsilon n=1... [more]
A0A2R5GM02_9STRA8.610e-2044.35eIF-2B GDP-GTP exchange factor subunit epsilon n=1... [more]
A0A8K1CIZ5_PYTOL1.150e-1942.61Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A484EBE6_BRELC1.280e-1842.24W2 domain-containing protein n=1 Tax=Bremia lactuc... [more]
A0A0P1AK76_PLAHL1.320e-1843.97Translation initiation factor eif-2b subunit n=1 T... [more]
U9SM16_RHIID9.800e-1742.98eIF-2B GDP-GTP exchange factor subunit epsilon n=9... [more]
A0A2D4CIJ8_PYTIN1.860e-1639.29eIF-2B GDP-GTP exchange factor subunit epsilon n=1... [more]
A0A397TCJ0_9GLOM3.330e-1642.48eIF-2B GDP-GTP exchange factor subunit epsilon n=1... [more]
A0A166N8E7_9AGAM1.170e-1545.30eIF-2B GDP-GTP exchange factor subunit epsilon n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.160.10.10coord: 67..192
e-value: 1.6E-18
score: 68.5
NoneNo IPR availablePANTHERPTHR45887FAMILY NOT NAMEDcoord: 1..194
IPR001451Hexapeptide repeatPFAMPF14602Hexapep_2coord: 114..143
e-value: 0.011
score: 15.5
IPR001451Hexapeptide repeatPFAMPF00132Hexapepcoord: 84..111
e-value: 3.4E-5
score: 23.4
coord: 162..185
e-value: 0.0031
score: 17.2
IPR011004Trimeric LpxA-like superfamilySUPERFAMILY51161Trimeric LpxA-like enzymescoord: 32..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19137contigH-paniculata_contig19137:287..4825 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19137.4801.1mRNA_H-paniculata_contig19137.4801.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19137 278..4825 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19137.4801.1 ID=prot_H-paniculata_contig19137.4801.1|Name=mRNA_H-paniculata_contig19137.4801.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=195bp
MRKDFVANEAANQELGNKILAHVVPDAEASFAVRVHDFRLYNEVSRDVIS
RWIYPLVPDNATSGGVQTHYTYERGCKYKATGVNLHRSVKVGNGVVIGAD
VTVGENSEIKRSVIGDGCRIGANVLMEDSYVWSGTEVEDGARLTGAVLAS
RAMAKSHADRCGAVVKAGAEISRGCVLGPGTVVGKGVRLQEFTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001451Hexapep
IPR011004Trimer_LpxA-like_sf