mRNA_H-paniculata_contig1913.4799.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1913.4799.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI) HSP 1 Score: 209 bits (532), Expect = 2.440e-53 Identity = 159/449 (35.41%), Postives = 220/449 (49.00%), Query Frame = 3
Query: 1776 ISGWCVHQHWRGKSMNATDHLRRKHGCEFPVTRLHRKAVKHKAVELYDATT-HLVKERTSQ*THRR*LHGACELRLVTDKGFTLRYGGIRLSEVTPDTELESRLLAVRQFNPKPEILNN-RLSEVLEMFLEGVLEESNLSICNVSSSTTDSGSDVK-RLGKELLLEQWEWCICHMLNCTLVE-----------GN----------------------------FLPEQAEQYSGFTRTKLKNAAPYQWSDLAGVLGLVVLNSEAIKATFACEGKECSPAEWDDEIREVYSLVKPVADIIVNARGTHVPTAPDIVLQLCALKMTILSTIAPLKIRSIKRMYPHGYRDCSGVSSGRIVHASHEGLHRLDGGGSENARALSCHRLAMVGKRYGPPLNAWDTDHPFNMQLMMHPATASLGHADILCDDKERAAAVKENISDGVIKLAVKLAEK 2996
I G+C + G+ + L + FP+ RLH++AV VE Y ATT E T++ LH +L L DK TL + G+RL + + L+SRLLAVRQFNP E+ N RLS VLE +L VLEE L + + S+T+D+GSDVK RL L+ W+ C+CHMLNC+LVE GN F EQ YS KL N AP +WS ++GVL ++N I +A EG A ++EI E+YSL+KPVA++IV + THVPT VL L LK++ + A L + + R G+ + +G + H G S + Y + TD F+MQ+ +HP TA L + D L + AA VK++I+D +I LAV+LAEK
Sbjct: 9 IEGFCPLSY--GEKRWVRESLNQIAAKGFPLGRLHKEAVAKMVVEYYAATTAQFQAEITAEVGGVPRLH--LDLDLWVDKSSTLMFMGVRLFYIDREWRLKSRLLAVRQFNPTLEMFENERLSAVLEKYLTDVLEEFGLDVSMLFSATSDAGSDVKHRLCHTLIPRLWKSCVCHMLNCSLVEAIGTRVDSRKPGNPAARKVVLAVKKVVEHIRRSKSPGAKAIFQEEQVRHYSQCLHRKLVNVAPQRWSGVSGVLEATIVNRVGIDGVYAREGSVNPLAPHENEIDELYSLIKPVAELIVTCQQTHVPTGQAAVLGLATLKLSTFNVDARLDVLTPVRA--QGWPEGTGGGERKATSVPRLHNHLTQVGRDAREHLASALDRRYFDRCYKSADSEKTTDFVFDMQMGLHPTTADLQYVDKLTSTEVHAAFVKKSITDKIIALAVELAEK 451
BLAST of mRNA_H-paniculata_contig1913.4799.1 vs. uniprot
Match: D8LFP4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI) HSP 1 Score: 199 bits (505), Expect = 2.720e-49 Identity = 149/418 (35.65%), Postives = 205/418 (49.04%), Query Frame = 3
Query: 1860 FPVTRLHRKAVKHKAVELYDATTHLVKER-TSQ*THRR*LHGACELRLVTDKGFTLRYGGIRLSEVTPDTELESRLLAVRQFNPKPEILNN-RLSEVLEMFLEGVLEESNLSICNVSSSTTDSGSDVKRLGKELLLEQWEWCICHMLNCTLVEGN-------------------------------------FLPEQAEQYSGFTRTKLKNAAPYQWSDLAGVLGLVVLNSEAIKATFACEGKECSPAEWDDEIREVYSLVKPVADIIVNARGTHVPTAPDIVLQLCALKMTILSTIAPLKIRSIKRMYPHGYRDCSGVSSGRIVHASHEGLHRLDGGGSENARALSCHRLAMVGKRYGPPLNAWDTDHPFNMQLMMHPATASLGHADILCDDKERAAAVKENISDGVIKLAVKLAEK 2996
F +R+ ++ VK VE Y AT KE ++ LH L L DK +L+Y G+R V +L+S LLAVRQFNP PE L N RLSE+LE ++ VLEE + + S+T+D+G DVKRL LL EWC+CHML+ +L E F EQ Q+S + K+ NAAP +WS + G L V N AI +A EG++ + EI E+YSL++PVA++I + TH PT VL L ALK++ L+ APL I + G + +G R +H+ L R+ G S KRY + A T F+MQ+ +HP TA L + L + AA VK+NI+D +I LA KLA+K
Sbjct: 146 FAPSRIRKQEVKRMVVECYAATAAQFKEEMATEVAGVPCLH--LSLELWVDKSSSLKYMGVRFFYVNSVWQLKSYLLAVRQFNPTPETLKNERLSELLEKYVFAVLEEFGIDASLLFSATSDAGGDVKRLCSVLLPGLREWCVCHMLSDSLAEAVGTCVGPQQPGGRAARNVVMAVKKAVERVRKSPASKDIFTEEQVIQFSQCSNRKVVNAAPQRWSGVTGALEATVTNRAAINGVYAEEGEDSPLSPHVHEIDELYSLIQPVAEVIATCQQTHFPTGQAAVLGLAALKLSTLNADAPLDILTPASKPTQGATEGAGGEQ-RTTARAHKDLTRV--GREAREHLASALHWRDFDKRYKSTV-AKSTGLVFDMQMGLHPCTADLQYVSRLAPTEGHAAVVKKNITDKIIALAAKLADK 557
BLAST of mRNA_H-paniculata_contig1913.4799.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE) HSP 1 Score: 185 bits (470), Expect = 4.540e-45 Identity = 140/398 (35.18%), Postives = 189/398 (47.49%), Query Frame = 3
Query: 1776 ISGWCVHQHWRGKSMNATDHLRRKHGCEFPVTRLHRKAVKHKAVELYDATTHLVKERTSQ*THRR*LHGACELRLVTDKGFTLRYGGIRLSEVTPDTELESRLLAVRQFNPKPEIL-NNRLSEVLEMFLEGVLEESNLSICNVSSSTTDSGSDVKRLGKELLLEQWEWCICHMLNCTLVE-----------GN--------------------------FLPEQAEQYSGFTRTKLKNAAPYQWSDLAGVLGLVVLNSEAIKATFACEGKECSPAEWDDEIREVYSLVKPVADIIVNARGTHVPTAPDIVLQLCALKMTILSTIAPLKIRSIKRMYPHGYRDCSGVSSGRIVHASHEGLHRLDGGGSENARALSCHRLAM--VGKRYGPPLNAWDTDH 2849
I G+C H + + A+ L+ FP+T +H KAVK + R LH L L DK +L+Y GIRL L SRL+AVRQFNP E+L +NRLS +L+ +LE VLEE L + + S+T+D+GSDVKRL LL WEWC+CHM+NC LVE GN F EQ +QY+ KL NAAP +WS + VL V++N AI + EGK+ +EI E+YS++KP A +IV + T VPT VL L ALK+ L+ +PL+I + R + SG+ G S H L G ++ R C + KRY + DTD+
Sbjct: 118 IEGFCPLSHGEKEWVRAS--LKLTALKNFPITGIHNKAVKQMIGGM------------------RLLHH--NLDLWVDKFSSLKYIGIRLFYADRTWVLRSRLIAVRQFNPTKELLEDNRLSALLQKYLESVLEEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMINCALVEAFGTHVDPAKSGNPGARKVITTVKKVVEHIRKSPRAKAIFEEEQVQQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRAAIDGVYTAEGKDSPLTSLTEEIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLALAALKLITLNVDSPLEILTPARKLAQA--ETSGIGGGERPATSTPREHSLSTGVAKGTRQHICESVDWWWFDKRY-KSAESQDTDY 490
BLAST of mRNA_H-paniculata_contig1913.4799.1 vs. uniprot
Match: A0A6H5KEC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEC8_9PHAE) HSP 1 Score: 160 bits (405), Expect = 5.940e-40 Identity = 113/298 (37.92%), Postives = 146/298 (48.99%), Query Frame = 3
Query: 1743 CLPGN*FLPREISGWCVHQHWRGKSMNATDHLRRKHGCEFPVTRLHRKAVKHKAVELYDATTHLVK-ERTSQ*THRR*LHGACELRLVTDKGFTLRYGGIRLSEVTPDTELESRLLAVRQFNPKPEIL-NNRLSEVLEMFLEGVLEESNLSICNVSSSTTDSGSDVKRLGKELLLEQWEWCICHMLNCTLVEGN---------------------------------------FLPEQAEQYSGFTRTKLKNAAPYQWSDLAGVLGLVVLNSEAIKATFACEGKECSPAEWDDEIREV 2513
CL N I G+C H + + A+ L FP+T +H KAVK VE+Y AT K E +Q R LH L L DK +L+Y GIRL V L SRL+AVRQFNP E+L +NRLS +L+ +LE VLEE L + + S+T+D+GSDVKRL LL WEWC+CHM+NC LVE F EQ QY+ KL NAAP +WS + VL V++N A+ A + EGK+ +EI E+
Sbjct: 9 CLAMNWVKCNIIQGFCPLSHGEKEWVRASLQLTALKN--FPITGIHNKAVKQMVVEMYAATASQFKMEMAAQIGGMRLLH--LNLDLWVDKFSSLKYIGIRLFYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSALLQKYLESVLEEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMINCALVEAFGTHVNPAKSINPRCTQSDHDGEKGCGVHPQISQSEVGAIFEQEQVRQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRAAVNAVYTTEGKDSPLTSLTNEIDEL 302
BLAST of mRNA_H-paniculata_contig1913.4799.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE) HSP 1 Score: 163 bits (413), Expect = 3.570e-39 Identity = 121/358 (33.80%), Postives = 158/358 (44.13%), Query Frame = 3
Query: 2034 GIRLSEVTPDTELESRLLAVRQFNPKPEIL-NNRLSEVLEMFLEGVLEESNLSICNVSSSTTDSGSDVKRLGKELLLEQWEWCICHMLNCTLVEGN-------------------------------------FLPEQAEQYSGFTRTKLKNAAPYQWSDLAGVLGLVVLNSEAIKATFACEGKECSPAEWDDEIREVYSLVKPVADIIVNARGTHVPTAPDIVLQLCALKMTILSTIAPLKIRSIKRMYPHGYRDCSGVSSGRIVHASHEGLHRLDGGGSENARALSCHRLAMVGKRYGPPLNAWDTDHPFNMQLMMHPATASLGHADILCDDKERAAAVKENISDGVIKLAVKLAE 2993
GIRL V L SRL+AVRQFNP E+L +NRLS +L+ +LE VL E L + + S+T+D+GSDVKRL LL WEWC+CHM+NC +V+ F EQ QY+ KL NAAP +WS + VL V++N AI +A EGK DEI E++ ++KP A +IV+ T P + +GV+ G H R KRY + DTD+ F+MQ+ +HP TA L + D L A AVK I+D VI LAVKLAE
Sbjct: 3 GIRLYYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSTLLQKYLERVLAEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMMNCAVVKAFGMHVDPAKSRNPGARKVITTVKTIVEHIRKSPRAKAIFEEEQVRQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRPAIDGVYAAEGKHSPLTSLTDEIDELHYIIKPAAQVIVSGERPATST-------------------------------PREHSLLTGVARGTRQHMCESVDWR------------------WFDKRY-KSAKSQDTDYVFDMQMALHPTTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAE 310
BLAST of mRNA_H-paniculata_contig1913.4799.1 vs. uniprot
Match: A0A6H5KWS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWS6_9PHAE) HSP 1 Score: 155 bits (391), Expect = 1.250e-36 Identity = 109/285 (38.25%), Postives = 142/285 (49.82%), Query Frame = 3
Query: 1776 ISGWCVHQHWRGKSMNATDHLRRKHGCEFPVTRLHRKAVKHKAVELYDATTHLVK-ERTSQ*THRR*LHGACELRLVTDKGFTLRYGGIRLSEVTPDTELESRLLAVRQFNPKPEIL-NNRLSEVLEMFLEGVLEESNLSICNVSSSTTDSGSDVKRLGKELLLEQWEWCICHMLNCTLVEGN-------------------------------------FLPEQAEQYSGFTRTKLKNAAPYQWSDLAGVLGLVVLNSEAIKATFACEGKECSPAEWDDEIREV 2513
I G+C H + + A+ L+ FP+T +H +AVK VE+Y AT K E +Q R LH L L DK +L+Y GI L V L SRL+AVRQFNP E+L +NRLS +++ LE VLEE L + V S+T+DSGSDVKRL LL WEWC+CHM+NC LVE F EQ QY+ KL NAAP +WS + VL V++N A+ A + EGK+ +EI E+
Sbjct: 173 IEGFCPVSHGEKEWVRAS--LKLTALKNFPITGIHNEAVKQMVVEMYAATASQFKMEMAAQIGGMRLLH--LSLDLWVDKFSSLKYVGIPLFYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSALVQKHLESVLEEYGLDVSLVFSATSDSGSDVKRLCDVLLPGLWEWCVCHMINCALVEAFGTHVDSAKSRNPGARKVITMGKKVVEHIPKSPRAKAIFEQEQVRQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRAAVNAVYTTEGKDSPLTSLTNEIDEL 453
BLAST of mRNA_H-paniculata_contig1913.4799.1 vs. uniprot
Match: A0A6H5JM59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM59_9PHAE) HSP 1 Score: 116 bits (290), Expect = 9.710e-25 Identity = 99/293 (33.79%), Postives = 143/293 (48.81%), Query Frame = 3
Query: 1776 ISGWCVHQHWRGKSMNATDHLRRKHGCEFPVTRLHRKAVKHKAVELYDATTHLVK-ERTSQ*THRR*LHGACELRLVTDKGFTLRYGGIRLSEVTPDTELESRLLAVRQFNPKPEIL-NNRLSEVLEMFLEGVLEESNLSICNVSSSTTDSGSDVKRLGKELLLEQWEWCICHMLNCTLVEGNFLPEQAEQYSGFTRTKLKNAAPYQWSDLAGVLGLVVLNSEAIKATFACEGKECSPAEWDDEIREVYSLVKPVADIIVNARGTHVPTAPDIVLQLCALKMTILSTIAPLKI 2648
I G+C H + + A+ +T L+ KAVK V++Y AT K E +Q R LH L DK +L+ GIRL + L SRL+AVRQFNP E+L +NRL +L+ +LE VLEE L + + S+T+D+GSD G + + + + T+ E R K+ A + VL V++N AI + EGK+ DEI E++S++KP A +IV + T VPT VL L ALK+T L+ +PL+I
Sbjct: 9 IEGFCPLSHGGKEWVRAS----------LKLTALNNKAVKQVVVDMYAATASQYKMEMAAQIGGMRLLH--LNRDLWVDKFSSLKCIGIRLFYIDRTWVLRSRLIAVRQFNPTKELLEDNRLLALLQKYLESVLEEYGLDVSLLFSATSDAGSDA--FGTHVDPAKSRSPVVRKVIATV------KMVMEHIRKSPRAKVSFAVVIGCG-VTNVLEAVIVNRAAIDGVYTTEGKDSPLTSLTDEIDELFSIIKPAAQVIVKCQQTSVPTVQLAVLALAALKLTTLNVDSPLEI 280
BLAST of mRNA_H-paniculata_contig1913.4799.1 vs. uniprot
Match: A0A6H5KEK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK6_9PHAE) HSP 1 Score: 111 bits (277), Expect = 5.540e-22 Identity = 79/226 (34.96%), Postives = 110/226 (48.67%), Query Frame = 3
Query: 2319 FLPEQAEQYSGFTRTKLKNAAPYQWSDLAGVLGLVVLNSEAIKATFACEGKECSPAEWDDEIREVYSLVKPVADIIVNARGTHVPTAPDIVLQLCALKMTILSTIAPLKIRSIKRMYPHGYRDCSGVSSGRIVHASHEGLHRLDGGGSENARALSCHRLAMVGKRYGPPLNAWDTDHPFNMQLMMHPATASLGHADILCDDKERAAAVKENISDGVIKLAVKLAEK 2996
F EQ YS KL N AP +WS + GVL ++N I +A EG A + +I E+YS++KPVA++IV + THVPT L L ALK++ + A L + + A +G R +G G +A S V + Y P +A TD F+MQ+ +HP TA L + D L K AA V + I+D +I LAV+LA K
Sbjct: 54 FQEEQVRHYSQCLHRKLVNVAPQRWSGVGGVLEATIVNRVDIDGVYAREGSVNPLAPHEHDIDELYSVIKPVAELIVTYQQTHVPTGQAAALGLAALKLSTFNVDARLDV---------------------LTPARAQG--RPEGAGGVEPKATS------VPRCYKPADSAKTTDFVFDMQMGLHPTTADLQYVDKLASSKVHAAFVTKRITDKIITLAVELATK 250
BLAST of mRNA_H-paniculata_contig1913.4799.1 vs. uniprot
Match: A0A2V3ILY8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILY8_9FLOR) HSP 1 Score: 86.3 bits (212), Expect = 7.850e-15 Identity = 45/96 (46.88%), Postives = 66/96 (68.75%), Query Frame = 3
Query: 2025 RYGGIRLSEVTPDTELESRLLAVRQFNPKPEILNNR-LSEVLEMFLEGVLEESNLSICNVSSSTTDSGSDVKRLGKELLLEQWEWCICHMLNCTLV 2309
R+ GI+L V+ + E+++ LLAVR F P +L R LS++L+++ ++ E N+S + SST+D+GSDVKRL L+ E WEWC+ HMLNC LV
Sbjct: 102 RFFGIQLFYVSREWEVKAVLLAVRHFCPSGNLLPGRSLSDILQLWTNKIILEFNVSYDKILSSTSDTGSDVKRLCSVLIPESWEWCLPHMLNCVLV 197
BLAST of mRNA_H-paniculata_contig1913.4799.1 vs. uniprot
Match: A0A6H5KHW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHW5_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 3.240e-14 Identity = 63/156 (40.38%), Postives = 85/156 (54.49%), Query Frame = 3
Query: 1776 ISGWCVHQHWRGKSMNATDHLRRKHGCEFPVTRLHRKAVKHKAVELYDATTHLVK-ERTSQ*THRR*LHGACELRLVTDKGFTLRYGGIRLSEVTPDTELESRLLAVRQFNPKPEILNN-RLSEVLEMFLEGVLEESNLSICNVSSSTTDSGSDVK 2237
I G C + G+ + L + FP+ RLH++ V VE Y ATT K E ++ LH +L L DK TL + G+RL + + L SRLLAVRQFNP PE+ N RLS++LE L VLE L + + S+T+D+GSDVK
Sbjct: 22 IEGCCPLSY--GEKRRVRESLNQIAAKGFPLDRLHKETVAKMVVEYYAATTAQFKAEIAAEVGGVPRLH--LDLELWVDKSSTLMFMGVRLFYIDREWRLRSRLLAVRQFNPTPEMFENERLSKLLEKHLTDVLEFG-LDVYMLFSATSDAGSDVK 172 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1913.4799.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1913.4799.1 >prot_H-paniculata_contig1913.4799.1 ID=prot_H-paniculata_contig1913.4799.1|Name=mRNA_H-paniculata_contig1913.4799.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=365bp MFLEGVLEESNLSICNVSSSTTDSGSDVKRLGKELLLEQWEWCICHMLNCback to top mRNA from alignment at H-paniculata_contig1913:353..10680+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1913.4799.1 ID=mRNA_H-paniculata_contig1913.4799.1|Name=mRNA_H-paniculata_contig1913.4799.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10328bp|location=Sequence derived from alignment at H-paniculata_contig1913:353..10680+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1913:353..10680+ >mRNA_H-paniculata_contig1913.4799.1 ID=mRNA_H-paniculata_contig1913.4799.1|Name=mRNA_H-paniculata_contig1913.4799.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2190bp|location=Sequence derived from alignment at H-paniculata_contig1913:353..10680+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |