prot_H-paniculata_contig19118.4796.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19118.4796.1
Unique Nameprot_H-paniculata_contig19118.4796.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length289
Homology
BLAST of mRNA_H-paniculata_contig19118.4796.1 vs. uniprot
Match: D8LJ91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ91_ECTSI)

HSP 1 Score: 436 bits (1120), Expect = 3.920e-152
Identity = 217/292 (74.32%), Postives = 255/292 (87.33%), Query Frame = 0
Query:    1 MQSFAFFIALLATANAKL---LGDGAFKMKFSSVKEEAEKFSHKCREELNEEGPTFTIDVSDHTLGKGVGSLNLEGKFQREVMDNVDCGVVYKFNECRGLPTSVWVSTIQDVGDEMTAHVRADVDVDSRNAVIDCRVSKGRDSVACDFDTADNTVGPLRITKHLDLNGKNVIVQPTLDVQGQTGKCVIAAEVDGDTTSAELTINHSEDSAVLEVCHRLDDSNVISPKVDLKTGDIAVRLNRQLGDERAVKVTAMRENVDWEYFEGAWQVRGNVPLVDVGDS-AISIKRSITL 288
            M+S AFF+AL A  +A     + + +F  +F+S+KEEA++FS  CR+ LN EGPTFTIDVSDH+L  GVGSLNLEG+FQREV+DNVDCGVVYKFNECRG+PTS+WVST QD+GD+MTA++RAD+D+DS+NAVIDCRV+ GRDSVA DFDTAD+T+GPLRITKHLDLNG+ VIVQPT+DVQG+TG+ V+AAE+DGD TSAELT+NH+EDSAVLEVCHRLDD+NVISPKVDLKTGDIAVRLNR LGD RAVK TA RENVDWEY EGAW V+GNVPL   G + AIS KRSITL
Sbjct:    1 MKSVAFFVALFAATDAWRTVEVPEPSFGSRFTSIKEEADRFSAACRDALNGEGPTFTIDVSDHSLSDGVGSLNLEGRFQREVVDNVDCGVVYKFNECRGMPTSLWVSTTQDLGDDMTANLRADMDIDSKNAVIDCRVNSGRDSVAVDFDTADSTMGPLRITKHLDLNGRKVIVQPTVDVQGKTGEVVVAAELDGDVTSAELTVNHAEDSAVLEVCHRLDDNNVISPKVDLKTGDIAVRLNRSLGDARAVKFTAQRENVDWEYLEGAWVVKGNVPLTSNGATGAISFKRSITL 292          
BLAST of mRNA_H-paniculata_contig19118.4796.1 vs. uniprot
Match: A0A6H5K004_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K004_9PHAE)

HSP 1 Score: 431 bits (1107), Expect = 6.260e-149
Identity = 216/292 (73.97%), Postives = 253/292 (86.64%), Query Frame = 0
Query:    1 MQSFAFFIALLATANAKL---LGDGAFKMKFSSVKEEAEKFSHKCREELNEEGPTFTIDVSDHTLGKGVGSLNLEGKFQREVMDNVDCGVVYKFNECRGLPTSVWVSTIQDVGDEMTAHVRADVDVDSRNAVIDCRVSKGRDSVACDFDTADNTVGPLRITKHLDLNGKNVIVQPTLDVQGQTGKCVIAAEVDGDTTSAELTINHSEDSAVLEVCHRLDDSNVISPKVDLKTGDIAVRLNRQLGDERAVKVTAMRENVDWEYFEGAWQVRGNVPLVDVGDS-AISIKRSITL 288
            M+S AFF+AL A  +A     + + +F  +F+S+KEEA++FS  CR+ LN EGPTFTIDVSDH+L  GVGSLNLEG+FQREV+DNVDCGVVYKFNE RG+PTS+WVST QD+GD+MTA++RAD+D+DS+NAVIDCRV+ GRDSVA DFDTAD+T+GPLRITKHLDLNG+ VIVQPT+DVQG+TG+ VIAAE+DGD TSAELT+NH+EDSAVLEVCHRLDD+NVISPKVDLKTGDIAVRLNR LGD RAVK TA RENVDWEY EG W V+GNVPL   G + AIS KRSITL
Sbjct:   81 MKSVAFFVALFAATDAWRTVEVAEPSFGSRFTSIKEEADRFSAACRDVLNGEGPTFTIDVSDHSLSDGVGSLNLEGRFQREVVDNVDCGVVYKFNERRGMPTSLWVSTTQDLGDDMTANLRADMDIDSKNAVIDCRVNSGRDSVAVDFDTADSTMGPLRITKHLDLNGRKVIVQPTVDVQGKTGEVVIAAELDGDVTSAELTVNHAEDSAVLEVCHRLDDNNVISPKVDLKTGDIAVRLNRSLGDARAVKFTAQRENVDWEYLEGPWVVKGNVPLTSDGSTGAISFKRSITL 372          
BLAST of mRNA_H-paniculata_contig19118.4796.1 vs. uniprot
Match: A0A836CCC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCC7_9STRA)

HSP 1 Score: 264 bits (675), Expect = 5.280e-85
Identity = 125/239 (52.30%), Postives = 177/239 (74.06%), Query Frame = 0
Query:   50 GPTFTIDVSDHTLGKGVGSLNLEGKFQREVMDNVDCGVVYKFNECRGLPTSVWVSTIQDVGDEMTAHVRADVDVDSRNAVIDCRVSKGRDSVACDFDTADNTVGPLRITKHLDLNGKNVIVQPTLDVQGQTGKCVIAAEVDGDTTSAELTINHSEDSAVLEVCHRLDDSNVISPKVDLKTGDIAVRLNRQLGDERAVKVTAMRENVDWEYFEGAWQVRGNVPLVDVGDSAISIKRSITL 288
            GP F ++++D +L  G GSLNLEG++ RE++DNV+ GV Y +N  RGLP+S+WVST  D+ D+     +A+ DV S+  VI+ R+ +G D ++ DFDT  N  GPL++ K LD+NG+ + ++PT++V+ +TG+ VI  EVD D T+AELT+N +++SA LEV HRLDD NV+SPKV+LK+GD++VRLNR L +   ++VTA R+NVDWE+ E AW V+GN+PL D G S IS KRSI L
Sbjct:   21 GPVFHVNINDPSLKDGAGSLNLEGEYSRELVDNVNAGVKYDYNANRGLPSSLWVSTSADIDDDTKLCAKAEYDVKSKATVIEARLERGSDGISIDFDTGSNEAGPLKLRKVLDMNGRRLTLEPTINVRDRTGELVINTEVDEDKTTAELTLNQADESASLEVSHRLDDFNVVSPKVNLKSGDVSVRLNRALDNGGVIEVTADRKNVDWEFNENAWTVKGNIPLEDTGASTISFKRSINL 259          
BLAST of mRNA_H-paniculata_contig19118.4796.1 vs. uniprot
Match: A0A836CPR3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPR3_9STRA)

HSP 1 Score: 240 bits (613), Expect = 1.310e-75
Identity = 116/239 (48.54%), Postives = 168/239 (70.29%), Query Frame = 0
Query:   50 GPTFTIDVSDHTLGKGVGSLNLEGKFQREVMDNVDCGVVYKFNECRGLPTSVWVSTIQDVGDEMTAHVRADVDVDSRNAVIDCRVSKGRDSVACDFDTADNTVGPLRITKHLDLNGKNVIVQPTLDVQGQTGKCVIAAEVDGDTTSAELTINHSEDSAVLEVCHRLDDSNVISPKVDLKTGDIAVRLNRQLGDERAVKVTAMRENVDWEYFEGAWQVRGNVPLVDVGDSAISIKRSITL 288
            GP   I+V D +L +GVGSLNL G+  RE+++NV+ G+ Y +N  RGLP+S+WVST  +V D++    +A+ D+ S++ +I+ R+ +G D +A DFDT  N  GPLRI K  D NG+ ++V+P  +V+ +TG+ VI +E+D D T+AELT++ + DSA LEV HRLD+ N++ PKVDLK GD++VRL R L +   + VTA + N+DWE  E +W V+GN+PL D   S IS KRSI+L
Sbjct:   22 GPVLHINVDDPSLSQGVGSLNLSGEVSRELVENVNAGLKYDYNTNRGLPSSLWVSTSAEVDDDVYVSAKAEYDLKSKSTIIEARLERGDDEIAIDFDTLTNEAGPLRIRKVFDANGRRLVVKPKFNVRDRTGELVINSEIDSDITTAELTLDQATDSASLEVSHRLDEYNIVCPKVDLKNGDMSVRLVRALENGGVLGVTADKRNIDWELEEDSWTVKGNIPLEDTQRSTISFKRSISL 260          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19118.4796.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LJ91_ECTSI3.920e-15274.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K004_9PHAE6.260e-14973.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CCC7_9STRA5.280e-8552.30Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CPR3_9STRA1.310e-7548.54Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..288
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.697

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19118contigH-paniculata_contig19118:776..3693 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19118.4796.1mRNA_H-paniculata_contig19118.4796.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19118 2..3693 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19118.4796.1 ID=prot_H-paniculata_contig19118.4796.1|Name=mRNA_H-paniculata_contig19118.4796.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=289bp
MQSFAFFIALLATANAKLLGDGAFKMKFSSVKEEAEKFSHKCREELNEEG
PTFTIDVSDHTLGKGVGSLNLEGKFQREVMDNVDCGVVYKFNECRGLPTS
VWVSTIQDVGDEMTAHVRADVDVDSRNAVIDCRVSKGRDSVACDFDTADN
TVGPLRITKHLDLNGKNVIVQPTLDVQGQTGKCVIAAEVDGDTTSAELTI
NHSEDSAVLEVCHRLDDSNVISPKVDLKTGDIAVRLNRQLGDERAVKVTA
MRENVDWEYFEGAWQVRGNVPLVDVGDSAISIKRSITL*
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