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Homology
BLAST of mRNA_H-paniculata_contig191.4785.1 vs. uniprot
Match: D7FJZ6_ECTSI (RNA_pol_L_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJZ6_ECTSI) HSP 1 Score: 187 bits (475), Expect = 2.220e-54 Identity = 89/104 (85.58%), Postives = 97/104 (93.27%), Query Frame = 3
Query: 366 MAVNETRPTVADVVFAVKEGATPSSATFIFGNEDHTLGNALRHVLMQNSEVDFCGYSVPHPSEPKMNLRLQTTGRPALALLKEGLRDLRDLCDLLEDRVDEEIP 677
MAVNE RPTVAD+ F VKEG++ SSATFIFG+EDHTLGNALRHVLMQN EVDFCGYSVPHPSEPKMNLRLQTTGRPAL LLKEGLRDLRDLC++LE+RV+ EIP
Sbjct: 1 MAVNEHRPTVADIKFQVKEGSSLSSATFIFGDEDHTLGNALRHVLMQNKEVDFCGYSVPHPSEPKMNLRLQTTGRPALELLKEGLRDLRDLCNILEERVEREIP 104
BLAST of mRNA_H-paniculata_contig191.4785.1 vs. uniprot
Match: A0A835YNA2_9STRA (RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNA2_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.880e-38 Identity = 69/101 (68.32%), Postives = 84/101 (83.17%), Query Frame = 3
Query: 366 MAVNETRPTVADVVFAVKEGATPSSATFIFGNEDHTLGNALRHVLMQNSEVDFCGYSVPHPSEPKMNLRLQTT-GRPALALLKEGLRDLRDLCDLLEDRVD 665
M+VNE RP AD+ F + EGAT +SATF+FG+EDHTLGNALRHVLMQ E DFCGYSVPHPSEPKMNLRLQT G PA+ +LK GL+DL +CD+L++++D
Sbjct: 1 MSVNEHRPKPADLKFEILEGATTTSATFVFGDEDHTLGNALRHVLMQMPETDFCGYSVPHPSEPKMNLRLQTRDGVPAIDVLKRGLQDLVTICDILDEKLD 101
BLAST of mRNA_H-paniculata_contig191.4785.1 vs. uniprot
Match: A0A7S4DHT9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHT9_HETAK) HSP 1 Score: 140 bits (352), Expect = 3.510e-36 Identity = 67/95 (70.53%), Postives = 75/95 (78.95%), Query Frame = 3
Query: 366 MAVNETRPTVADVVFAVKEGATPSSATFIFGNEDHTLGNALRHVLMQNSEVDFCGYSVPHPSEPKMNLRLQTTGRPALALLKEGLRDLRDLCDLL 650
MAVNE R A+ FAV EG+T SATF+FGNEDHTLGNALRHVLMQ E DFCGYSVPHP+EPKMN+RLQT G AL +L+ GL DL +CDLL
Sbjct: 28 MAVNEHRTMPAEERFAVLEGSTSHSATFVFGNEDHTLGNALRHVLMQRKETDFCGYSVPHPTEPKMNVRLQTHGEDALTVLRAGLADLSGICDLL 122
BLAST of mRNA_H-paniculata_contig191.4785.1 vs. uniprot
Match: A0A7R9U1D2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1D2_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.690e-31 Identity = 62/102 (60.78%), Postives = 76/102 (74.51%), Query Frame = 3
Query: 366 MAVNETRPTVADVVFAVKEGATPSSA---TFIFGNEDHTLGNALRHVLMQNSEVDFCGYSVPHPSEPKMNLRLQTTGR--PALALLKEGLRDLRDLCDLLED 656
MAVNE R ADV F V E A + TF+FG+E HTLGNALRHVLM+ E FCGYS+PHPSEPKMN+RLQTT + PA+ LLK GL+DL D+CD++++
Sbjct: 1 MAVNEQRLATADVAFEVLEAADETDVGNRTFVFGDEGHTLGNALRHVLMRRKETHFCGYSIPHPSEPKMNMRLQTTDKEMPAIDLLKTGLQDLADVCDVVDE 102
BLAST of mRNA_H-paniculata_contig191.4785.1 vs. uniprot
Match: A0A7S1TTH9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTH9_9STRA) HSP 1 Score: 124 bits (310), Expect = 2.320e-30 Identity = 60/108 (55.56%), Postives = 77/108 (71.30%), Query Frame = 3
Query: 366 MAVNETRPTVADVVFAV---KEGATPSSATFIFGNEDHTLGNALRHVLMQNSEVDFCGYSVPHPSEPKMNLRLQTTGRP--ALALLKEGLRDLRDLCDLLEDRVDEEI 674
M+VNE R +V F + + P + TFIFGNEDHTLGNALRHVLMQ E FCGYS+PHPSEPKMNLRLQT + A+ LLK GL+DL ++CD++++ D+ +
Sbjct: 1 MSVNEHRTPQEEVDFQILNSPDDKDPGNRTFIFGNEDHTLGNALRHVLMQRRETQFCGYSIPHPSEPKMNLRLQTVNKDTDAVDLLKTGLKDLSEICDVVDETFDDAL 108
BLAST of mRNA_H-paniculata_contig191.4785.1 vs. uniprot
Match: A0A4D9D350_9STRA (RNA_pol_L_2 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D350_9STRA) HSP 1 Score: 122 bits (307), Expect = 7.610e-30 Identity = 59/104 (56.73%), Postives = 75/104 (72.12%), Query Frame = 3
Query: 366 MAVNETRPTVADVVFAVKEGATPSSATFIFGNEDHTLGNALRHVLMQNSEVDFCGYSVPHPSEPKMNLRLQTTG-RPALALLKEGLRDLRDLCDLLEDRVDEEI 674
M+VNE RP A+ F E S TF+FG+EDHTLGN+LRHVLM E FCGYSVPHPSEPKMN+RLQT+ +PAL +LK+GL ++ ++CDL + +D I
Sbjct: 1 MSVNEHRPQPAEKKFESLEYTDEHSRTFVFGDEDHTLGNSLRHVLMGRKETRFCGYSVPHPSEPKMNIRLQTSATKPALQVLKDGLHEMVEICDLFDFTLDRAI 104
BLAST of mRNA_H-paniculata_contig191.4785.1 vs. uniprot
Match: W7TJI2_9STRA (Dna-directed rna polymerases i and iii subunit rpac2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJI2_9STRA) HSP 1 Score: 122 bits (307), Expect = 2.200e-29 Identity = 59/104 (56.73%), Postives = 75/104 (72.12%), Query Frame = 3
Query: 366 MAVNETRPTVADVVFAVKEGATPSSATFIFGNEDHTLGNALRHVLMQNSEVDFCGYSVPHPSEPKMNLRLQTTG-RPALALLKEGLRDLRDLCDLLEDRVDEEI 674
M+VNE RP A+ F E S TF+FG+EDHTLGN+LRHVLM E FCGYSVPHPSEPKMN+RLQT+ +PAL +LK+GL ++ ++CDL + +D I
Sbjct: 37 MSVNEHRPQPAEKKFESLEYTDEHSRTFVFGDEDHTLGNSLRHVLMGRKETRFCGYSVPHPSEPKMNIRLQTSATKPALQVLKDGLHEMVEICDLFDFTLDRAI 140
BLAST of mRNA_H-paniculata_contig191.4785.1 vs. uniprot
Match: A0A7S2UY40_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY40_9STRA) HSP 1 Score: 120 bits (302), Expect = 2.880e-29 Identity = 58/104 (55.77%), Postives = 75/104 (72.12%), Query Frame = 3
Query: 366 MAVNETRPTVADVVFAVKEGATPSSATFIFGNEDHTLGNALRHVLMQNSEVDFCGYSVPHPSEPKMNLRLQTT-GRPALALLKEGLRDLRDLCDLLEDRVDEEI 674
MAVNE + AD+ F +G+T S TF FG+EDHTLGNALRHVLMQ ++ + CGYSVPHP+EP M++RLQT G A +LK+GL DL +CD L D+ D+ +
Sbjct: 1 MAVNEHKTLPADIRFQKLQGSTIDSCTFSFGDEDHTLGNALRHVLMQQAKTELCGYSVPHPTEPYMHVRLQTIQGSDATEVLKDGLNDLAKICDTLTDKFDKAL 104
BLAST of mRNA_H-paniculata_contig191.4785.1 vs. uniprot
Match: A0A7S0XDL5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDL5_9STRA) HSP 1 Score: 111 bits (277), Expect = 1.010e-25 Identity = 56/100 (56.00%), Postives = 74/100 (74.00%), Query Frame = 3
Query: 366 MAVNETRPTVAD--VVFAVKEGATPSSATFIFGNEDHTLGNALRHVLMQNSEVDFCGYSVPHPSEPKMNLRLQTTGR-PALALLKEGLRDLRDLCDLLED 656
M+VN+ R +A +F +K G SATFIFGNEDHTLGN+LR+VL Q +EVDF GYSVPHP EPK+N+RLQT A+ +LK+GL+DL + ++L+D
Sbjct: 1 MSVNDHRIPLASNTELFEIKPGNNNKSATFIFGNEDHTLGNSLRYVLSQRNEVDFVGYSVPHPYEPKLNIRLQTKENYTAVNVLKDGLKDLEETANILDD 100
BLAST of mRNA_H-paniculata_contig191.4785.1 vs. uniprot
Match: A0A094C6G5_9PEZI (RNA_pol_L_2 domain-containing protein n=2 Tax=unclassified Pseudogymnoascus TaxID=2637121 RepID=A0A094C6G5_9PEZI) HSP 1 Score: 111 bits (277), Expect = 2.090e-25 Identity = 49/86 (56.98%), Postives = 68/86 (79.07%), Query Frame = 3
Query: 414 VKEGATPSSATFIFGNEDHTLGNALRHVLMQNSEVDFCGYSVPHPSEPKMNLRLQTTGRPALALLKEGLRDLRDLCDLLEDRVDEE 671
V G++ ++A+F F NEDHTLGNALR+++M+N V+FCGYS+PHPSEPKMN+R+QT A L++GL DL DLCD++E++ EE
Sbjct: 46 VLPGSSDTAASFEFTNEDHTLGNALRYIIMKNPNVEFCGYSIPHPSEPKMNIRIQTYEGTAFEALEKGLDDLMDLCDVVEEKFVEE 131
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 185.3 |
| Seed ortholog evalue | 1.5e-44 |
| Seed eggNOG ortholog | 2880.D7FJZ6 |
| Preferred name | POLR1D |
| KEGG rclass | RC02795 |
| KEGG ko | ko:K03020,ko:K03027 |
| KEGG Reaction | R00435,R00441,R00442,R00443 |
| KEGG Pathway | ko00230,ko00240,ko01100,ko03020,ko04623,ko05169,map00230,map00240,map01100,map03020,map04623,map05169 |
| KEGG Module | M00181,M00182 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000428,GO:0001501,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005666,GO:0005730,GO:0005736,GO:0006139,GO:0006351,GO:0006360,GO:0006383,GO:0006399,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009304,GO:0009653,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0022613,GO:0030880,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0042254,GO:0042797,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0046483,GO:0048513,GO:0048562,GO:0048568,GO:0048598,GO:0048701,GO:0048703,GO:0048704,GO:0048705,GO:0048706,GO:0048731,GO:0048856,GO:0051216,GO:0055029,GO:0061448,GO:0061695,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1904888,GO:1990234 |
| EggNOG free text desc. | transcription by RNA polymerase I |
| EggNOG OGs | COG1761@1,KOG3438@2759 |
| Ec32 ortholog description | DNA-directed RNA polymerase, RBP11-like dimerisation domain |
| Ec32 ortholog | Ec-18_003060.1 |
| COG Functional cat. | K |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | br01611,ko00000,ko00001,ko00002,ko03021 |
| Exons | 5 |
| Model size | 1510 |
| Cds size | 321 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig191.4785.1 >prot_H-paniculata_contig191.4785.1 ID=prot_H-paniculata_contig191.4785.1|Name=mRNA_H-paniculata_contig191.4785.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=107bp
MAVNETRPTVADVVFAVKEGATPSSATFIFGNEDHTLGNALRHVLMQNSE
VDFCGYSVPHPSEPKMNLRLQTTGRPALALLKEGLRDLRDLCDLLEDRVD
EEIPGV* back to topmRNA from alignment at H-paniculata_contig191:1864..12306+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig191.4785.1 ID=mRNA_H-paniculata_contig191.4785.1|Name=mRNA_H-paniculata_contig191.4785.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10443bp|location=Sequence derived from alignment at H-paniculata_contig191:1864..12306+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTTTGCCCAAAATTCTGCCTGATATATATCATACTTTATGTTATTTACT
AGTAGGGGGCGTTACCTGCAGATTTCAACTTCTGGGTTCACGTTCTGCTA
TGTGTTGATTTTTGCAGGTGCATTAGGAGACTAGTTTTGCAAGTAAGAAC
TTCTATCGTCGGACCGCGGGTTTGATCTATCTACGAAAATGTTGATAAAA
CAAATAATGAAATAAGGTGCCCCAGCGAGATCGGTGACTGTGCCTGCTGG
CTTGAAACCACGGTGAGCTCATAGCCCCTGTAGACGCTACTCTTTGTGGG
TGCCTCTACTCCTAGCGTTCGTGTAAATCGTTGCTTGGTGAGGAATAATG
TGAAGTCACCGCGAAATGGTTTCAACCGTTTCAACTTCCTTGATAGGACA
GAGGGTGACATTATTTTGTATCATACGATAGATAGGTGAGGCAATATCTA
TTGATTGATGCTTCCCATAGAAGCATGTTTCATTCACAACAGATTATCCA
TTGTGTATTTGCACCTTCCTCCTCCATTTTGAGTGTGTGCACGCGTACAG
GACAGTTATGAGAAGGCACTGCATCAGTCATGAGAACCGCCAGACGCGCA
CCAGCAGTCGTAAAGTATTCGTTAATCACAGGATTGTCATATAGGAGTAT
TATAGGTGGTTTTATGTGGTGAGGGAAGTTCCTTTTAAGTTTGGTCAGTC
GTAAGTTCTGAGCATACAGGTTATTCGTGATGAATGTACACAACTTAAAT
TCGAGGTCGACAGCATAGCCTCAACAGGCTGTGCGATGGAGTTATTGTAT
GTTATATAATGTAAGTTTATAGAGCAAATGCGTCCGTTGTCTCATGAGTG
GTGAATTTGTTCGTTATTTTATTTCTGACAGGCGTTCATGTAAGCCATCT
CATGTTTACAGATGGTGCACACGCGAGTGTTACAGTTAGGGGTGCGCCTA
ACCCCCATTTGCAGCCAAATTCTGGCGACAGCGACCACATCGATAAAGGG
CCGAATAAGGGGGGAACATGTTTATCCCCTGATAGATAATGCCACCTACA
TCCCATAAAGTATTTGTATTCAGTGTCGGGTTTCCACGCACTTGTAACCT
GAAATACTTTATACAAGTTAGGAGTTGGCTCGTGAGACTCGACACACTCT
GGGGTGTGTGCCTAATCTAGAGCCTGTTCTTATAGGACATTTAATCCGCG
TTATATGAATTCCAAACGCCCCAATAAATAATATTTTGTTTTGCTACTTT
CTCTGTGAAGATGCTTCGTCGTCACGACTTGATAAATTCATAAAAATAAT
CCACAACTGTGGTTTTCGCGCACACGACGCAAAAAACCGCATCCCAATCG
ACGACCTTGCTGAGGAGTGTATTTATTGACAAGATACAAGTAGCTTATCA
ACACTAACAAGTACCCAAACTACTCGAATTTAAAGTGGTCAATCAACACC
CAAAACGCACCCAAAACTACTCGAATTTAGAGTGCGGGAGAGGGCATCCT
TTTCGGACGTACATATTCTTCACACATCTGTTCGTTAGGGTTACCTTCGG
TGGTCGTAGGGGCATATTCCGCGTGGCATTTTGCGACGGTTGTAGCTCGT
TGTTGTAGCCAGCATTCTCAGGGTCCCAAACTACTCGAAACTTAGCTTTG
CTCGGCTACCGTGTAGCTGTAAGCTGCACCAGTACATGACAAGAGGGGAC
AACGTGGATAACACAACACCAGCAGCAGCGCATCTTCGCGCATCCTACGC
CAAATCACCCTTTAATATTAGCAAGCGACGTTGTGTCTCTCCATGGTTAT
GTGTGTGTTTTTTGGGGAGGTGAAGTCAACTATATATTTTTTGTTATTTG
GCCCAAACCCTCTAAAAAGCCGGCAAAAAATCCTGGTCGATGCGAAATTT
TAGGACACAAGTACCGCCTTATACAGGACAATTCAGGACTTAGGCGCACC
CCTAACAGTAGAATTAGTGATGCTATGTTGTGGAGATCGTAATCCATGTT
ATGCCTGGCCGAAGAGATGCAAGAAGTCCTGGTAGGGTTTATGTTGATAG
TAGTATCCTGTTGAAATCTAACAAGCAGCACACCCGAATATCGACACCCG
TCAACTAGCTGCCAGCTTAACTGGTAACAGATGTAAACCGCTATAACTAG
TAAACTGGTTGGTATAAGTACCACCCCACACGAGTGGGGTGAGGTAATCC
CCCGAACCTGTAGCGAGCGAGCAGTGGGGCCAGAGGTCCTTTCGTGAGAG
TACCCAAGTGCTGAGCTACATCAACGTATGGTACGACACAAAATAAGAAC
GATGTGCCTTGAGGCTAAGATACGAACTGACAGGCAGAGAGCGAGACACG
GAAGTCATCACCCGTTACCCAGACACATCATGTGGACATCACGTCAGCTG
GACCCGTTATGAAGACGCCACGTCAGTTGTACCTGTCATGTACGGAAAAC
ACCCCGTACGGATGATAACACGTGTCATGAGGATACGAGTGTACTGTGGC
GTGATGGAACTTGTGGGCACCTAGCAATAACATTGAGAAAGTTTCCAGTT
TGTCATTTATTTTTTCCGTCACATGTTTCATACTCCAACGCATTCTCCCT
TGCATCTTTCATACTCTAAAAAGTCTGTTGATGGCGCATGGTGCTGTTTA
TCATGCCCTCAGGGAGTGCTGTACTTCTCTCCGCCCACTCGCCGTCCATC
AAGTAGCTGTGCCATCCATTCGTGCGATCTTCCCTTTGATGTAAACTGCA
AAATGCAAAAGGTGTGTTGAAGGAATCAAATATTTTTTCAGGTTTTGCGG
TTTTGGATCAATTTTTCAGTCGGAGTGGCTTTGCTGAAAGGCAAAATTTC
CACACATTTTTTACAGGGATGAGAATCCAGATTACGTTTTTCCTGCCTCC
TGCAACGCTTCCAGCGGGGCGCCCCCACCAGCAGGGAAGGGCATCAGCGC
GGCTTCGCCGCCAGCTAACTGAAAAAAACTCATCACTGGAACTGATTTGG
ATCTTACTCTACCAGTTCATTGGTTGAATCAACCAGTTCACAACTCTACA
AAAATAAGTGAAGTCTCGTCAAAAATCAGTTCAACTTATAGCCACGCCCC
ACCCGTTTCACTCGTCTGTACTGCACGGTGCCACAATATAGTGCAGTTAT
TCAGCATCACCAAATATTATGCCCGCTGGAAGTGATTATGCCAACGTTTT
CTATCCGTATACCGACTTGTTGGCCTATACCAACGTCATTCCTCTCTAAA
AAGTCGGCGTTTCGCCCGAGCCGTTTCGCCATACGCATGCGTGTCATCCC
CCCATTCCGCGGATGACGGCAAGCCGCTCTGCGTGGTAGTTTCAATGGCC
AATAGCCGTCAACTAAGAATTGCCATGCGTCTCACTAAGCATACATACAT
CAATAGCTCTTTTCTTTTCGTCAGCGCGCGCCATTTCAATCATGTCTTGG
ATCGTCGTTTTACATTTTGTCACTCCGCGTTGCCGAAGTCTCGTTTCCTT
GCGGCAACGTTTGAGTCCCTAAACGTATATTTGGCCTAACATTAAGATTC
CCAGGTTGCATTGGCAGTCGACCGAACGCTTCTTCGAACATCCACCTAGC
GGTGATCAGTTCTTTGACTTGTCTCGGCGAGCAGGGTGGACTAAATAGTC
AATTACTGGGTAACTCAATGGCGTTCCTGACTAATTGAATACAGTGAATG
AATTGCAGGATGTGATGAAAGGAACGGAGCATAGTAATCGTGGTTCCGGC
TGTAGCTCTTGATCAACTGACTACCGTGTACTCGGTTTCGGCAGAGTTGC
CTCAATAATACAGTGAATACGACAAATGTTTATCGCACCCAACTCGCGAA
GTCAGGGGCACAGACAAATGGCACGTGTTATCTTTTTGCTGCTTGGCTTG
AATTTATGTAGCTCCCCCAGTACAGAATGAATCTCCGTTGAACAAAGTCT
GGCACTACATCAGCTTCAAAGGTATCGCCCTATCAAAGACAGTATTGCTG
TACAGTAATGCGTGGGTTTTTGCCACTACAATCGATGTGCCCTGTTCCTT
TGATGACATGACATTATACGTAAGTGCTGCGTGCGGAATATGCTGGGTGC
AATTAAAGAGGAAGTGCCTTAACGCGTGGTGCTTTAGAAGGGCACGTCTA
CTTGTTGCTCCTATCTTGGTGTAGCGTTGTGCAGCTGGGCGTCAGGATTG
CGCCTTATAGATTGATGTGGTACTTTCTGGAAACTCAGTTTCAGGCAGTA
TTGTACAACTCAAACACCAAAGTCCACAACGTCTATCCGCTAAGCTTAGT
AGAAAGCCTCCCGATACCCCCCGCTTCCGCCCCCTCCATGAATTTGTTTA
TGAACATACACACAACACTTCCGCGAAGGTAAAGAGGTCGGAGCCGCGAG
ATACGTGTTTTCGTCATACTCCATATGTTTCTTCTGGACCTCGTCACCCC
CCCCTTCTTCGCGGCGGTTTCACCGCGAGACTGTCAAATTCCTTCGGTGT
TATTTTCAGGGTCCGACTTGAGTGTTTCGGTCCACGTCTCTGGCTCTTCG
CGTTACTACTCAGTTGTCGTATCATCTGGACAAATGTAACTGCCACTCGT
TCGATGAACGCCTATTGTAATTATGCTTAAATTCTCGTTCAGTAGAGTTG
AGGATTTGACGTCTTGAGGGCCGGCCGAGTATATGCGATCTTGCGAGATC
AAAGTAGATAGGGTGTATTAACATGGGTAGTTTTTTTATCGTTGTTGCGT
GGAAAATACGGTGCTCTAGACGAAAAGGCCGAAAGTCGTGTTGCTACATG
CGAAAAATGAAGGGAAAGAAATGACTGACCGGAGCATGTCAATCGTGTAA
ACTGAAATCGTTTCTCGTGACTCCACACAGAAAATTTAAGCTCACGCCAC
TTTTTATGGAACTGCGCATTTCGCAGTCTGTGACCAGAACATATCAGTTC
GTTTCTCCGCTCGAGCTTCTGCTTCCATTAAGCGGTGTCATGGCAGTCTG
GCCTATCTATGCGGTTGTGCGTGCGTGCGCTTGGGGTAGCAAGGTTCGTC
GTCTTCGTCAATGAAGAGGTCAAAGGTGGAATAGCGATGGCGCTTCGAGG
TATAGGGGTCATCATCGTTACCCATCTCCTCCGCTGCACCAGCGGTGGTG
ATACTCAGCTGCTGTAAGGCTACTAGGTCCGCTGCTGTCACCTCTGCATT
ATGCATCTCGGTTGTGTCGACCGTATGTACTGTGACGGGGCGGAGGTCCG
CAGCCAACTTCAGATTGGGCTATGATTCTTGTGGGTTGGCACTTGAAAAA
TAAATACATATAAATGATGCGCTAGCTGTCGAAACTTACCCTAATTTTTT
ACAATCTGGCCACTTTTTTTGCACTGCTCAAAAACGTTGGAACGTCGTAC
TGTCATTTTTTGCCTCGTCATGTCGGGTTGGAAAAAACATACGGCAAAAA
GTGTCGACTTCTTTTTTTTTACCGTGTTTTTGCCCCTCGCTGGTCAATCA
ATCTAGACTCTTCGAACCTAGCACAGCACTATTTTCGCAGACAGTATTGC
ACGGCATTGCTTATTTCGAAATCGAGACTTGTCGATACAGTATCTACTGC
ATGGCTCGCCGTCGCACAGCCGAACGAGCCCACAATACAATACAGTACGC
AGACGGTGTGCTGTACCTCAGCTGTAGGGCAGTACATCCTTCCGACAGAC
TCTAAACCGTATTACTATTAGTAATAATTATGCTTGCAAGTCGTGCTCCA
AAGCCCAAATGTTTTTTTCTGCTCGCCCCGACCTTAATGTGTACGTGTAA
AAAAAAATCGTTTCAATTTTTGTGCTGTAAAAAAGTGGAATTATTTCTCG
ATTTTTTTACAGTTTTTTTGCCCCATACTATGTGGCCTTAGCCGTGTTGT
TTTTATTTCCTTTTTTCGTGTTCCCAGCCGTCTATTTCCAAACATTCACC
GGATTGTCATGAATGAATCGCACGCCAGCACTACCGCGCGACCGCGCATC
TCAGGATCCGCATCCATGGCAGTTTTGTTGTTTTTTGCTTGATTTTCATC
AACGCGTTATCATTCCTCCTGAAAGAAGCATCCCATGAGCAAAGATATTG
AATCTATCGTGCGTTACAGGGGGATAGAGAGTTGAGTTGATGGGGATGCT
ATTTTTTTTGTTTTTGCACTTACTCTACCGCCGCCTATTTGCTCTATACA
TTATCCGGTACAAAGGATCATGGCTGTTAACGAGACGCGGCCGACTGTGG
CCGACGTGGTATTCGCTGTGAAGGAAGGAGCGACACCGTCGTCCGCCACC
TTCATATTCGGGTGTGTATCTATGGGACATTTTTTCGAAGGAGGCGTTTT
GTTGCCGCCAAAAGTGGTATGTGCGCATTGTGTCACACATTATTTTCATG
TTGGGATGGTTGTGTATTATTGGACAGTTTTTAAGAATTAATCGTTTTGG
TACCGCCAACGGGTATTTGTGCATCGTGTCACACAAGGTTTTGATGTTCG
GGTGCGTGTTTATTATTGGATGTTTTCCAAAGGAATTAGGCGTTTTGGTA
CGCCAAAGTGTACATTTGCGATTGTGTTATATTGGGTTTGGTATTTATGT
CATTGTGTTGGACCCATTTGTCTTACATATATATTTCTTCTTTTTTCGCG
TCACACGCTGCTCGAAACGATACTGTCATAAACGTTATGTTGGAATTATA
ATACCCACTATATATCTCTCCCACCCACATGGTATTTTGGGCATTGTTTC
GAATTACCTAGCTATATATATATATATATATATATATATATATATGGAAC
GTGTGTGGCGGACTGCCTTGAAAATAGATAGTCTCCCTTTTTTATTTCGT
CCAAACGAGCATTACCCTCTGTTGATCCAAATCCTTGTTTACATCATATC
GGTTATTTGTGTGTTTGACATGACCTCTGACCTAGGATTCTTGGGCAATA
GTAGCACGGTAACCAATGTTGTTTCAAGCGTTGAAATTTTCTCGACTTGA
CAGCCACGGTAACTCTAATTCATTGTCCATTGGAATCAGCGAAACACATA
AGTAGGATATGCATATTTGTATCCTTGGGTTTCTGTTACATCAGGCTTTC
TTGCGTTTTCCTGTTGAACCGGAAGGATTAGAATCTTTTACCTCAAGACT
TCATGTTAATTCTATTTCAAACCTAAGGTGTCCGCCCCGCAGTTACTACG
TCAGGCATGGGTCTACTCCTCAGAGAAATGTTGTGCGTGGATGAGAACGT
GTACCACCCTCTGATCGCGGGTCTGATAGATTATACCAACTAGTTGGAGA
AAAAAGAAAAGCGTCCTACTTGGCATAATTCCACTCACACCGTCTGCAGC
GCTTGACAGTCGTTGTGAGATTCCTGGGTTTTTTTTCCGAAACAGTTACC
CGCGCTAAATGGGTTAACCTTGTGCTGCTTCTGTCTTGCAGAAACGAAGA
CCACACTCTGGGCAATGCGCTACGGCACGTGCTAATGCAGAACTCGGAGG
TGGACTTCTGCGGGTACAGCGTGCCGCACCCGTCCGAGCCCAAGATGAAC
CTGAGGTTGCAGACGACAGGTTTGATGTGCAGTGCGTAGTATGTAGTACC
TTGCAATGGATACACTCTTCCTTGAACCCTATTGTAATGCGCAAACGCTG
AAGTAGGTGCCATAAAAAGAAAGGTTATCTATAGTTATAGTTCCGGTTTC
ATGAACAAGATGCATTGATCCCCATTTTATCCCTTCGGGGCGCAATAAGA
AAAAAACTTGAGTGTCACCTACTTGCCCGAATGAACCACTTCCCACTGTT
CACTACAGCCGAAAGCTATAGGCTAACGAGTCTCCCACTGTTTTTGTCGG
GGGGGGGCGAATCAAATCTATCTAATTGCGCCTCTATTGCTAATTTCCAT
CATACAACCGCCATGTTGCGTTGAAGAAAAACCATGCTCCAAAAGCAAAT
ATACGAATACAGATTCTGGAGATGTGAGCCCTCTAAGGGTCAATGCACTC
TAAAGGGGGTGTTTTGAATGCCCCATTTAGGACACCTTGTGCCTTCAAGT
GAGTCGTACGGTGTAGTAGCGTTTCACTTCAAGTCACTTTAGGCCTGAAA
GTGAGGCTGAGTAACTCGCGCGGAAAATCGGGTGCCGTGTGCTACAGTGG
GTATTCCCATTCAAGGCGGGTATGCGACGAGCGAAAACAAGATCTCAAAA
AACAAATTGCCTTATCAAGATCACCTTATTTTGCAGATGTACGGGATTTT
ATTCTGGTCACAAAGCCAATTTTCTCTGCATGAAATCTATTGCCGCCTGC
ATAATAACCGCCTCCAACGAGGGTACCTATTGTATGACACATCCAACAGT
GAAAGGCAGCACTGTGCCAGTTGTTGTCCCAGATAATGAGGCGGATGCAC
TCGGTGCAGGGGATGCTTCAAGTAGGAACGCATCAAATTATTGGCCCATA
TTTTGACCGGCCAGTCGAACTGTACACGATTGATACCTTTGCATCCTGAC
TATAGGTTCTGCGATGGAATTTTCAATTCTCCGATGGACCTGGTCATTTG
GCTCGCCTGGGAAAGTCAGCGTGTTTATGTGGTGCAACGATTGCTGATCC
CTTTGGTACATTATTGCGCAATGCACTTGGTATGACAGAAACTCCTCCCC
TTACCCCCCCCCCTCCCCCCGCCCCTAATGTTTCATGTTGTGGATAATGA
CTAAATAATTCAGCAGCTTGAGATGCTGGGTATACCTCCGTTTTGTCTTG
CGGCTGTTGTGTTTTTCTACAGTAAAGGAAAGTTGTACATCCCTGCTTGT
ACTTTTGACTTCCTACTTACTCTATGGAAACTATTATAGTCCAATTCACA
TTTCTCGTAGCGTAGACGCCGTCCTCCTGATGAACCTGTCCTTGGCAATT
GCCTCCCCTGGACAAAGCTCCGTCCTCCCGAGGATGTGGGGTCAATCGTT
GAACAAGTATGGCATGCAACACATGACTATGCTCCCTCGTTCGCCCCTTG
GACAGAACCGTACGTATGGTTCTCTGTACGCAATTAAATGTACTAATCTC
ACCGCACCGACCACCGGACAGCTTCCGCGGTTATGGAGACATTATGTTTT
GAAATATTGCTGATATCTGCAATATTTTTCTCTGGTGATACCAAGATAGT
GGGGAGAAAGACAGAAAATAGATACAGCCGCTCTGAATACATAGTAAATG
AAGTAACCAAACCAGCCAAAAATTGAACACCACCGATAGATGTACAAAAT
ATCGTTTTTTCCCCAAGTCGTCATATTTCCATGGGATCCAAGTCAATTCC
TTTTTCGAGGCAGTCCTCTTTTTTTTCTTTCTTTTTTTAAAGAAATTAAA
CTAAAAACCATTCGGTTAACGTCTAATGAATAAGATTATCAGAACTGCCA
GTTAACCTTGAAGGATTTTCTATCCAGATCCGACCAATTTTTTTTTTGTT
CTCTCTTCACGTTTTATTTTTTTCTTGTTTTATCTTGCTTGTACTATTTT
GCTTTTTGTTTGTTGCAGGCCGACCAGCTCTGGCATTGCTCAAGGAAGGA
TTGAGAGACTTACGTGACTTGTGCGATCTGTTGGAAGATCGGGTGGACGA
AGAAATACCGGGCGTATAGTGTAGAATAGTGACCCGGATTTGGCAATGAT
GAAGTGTTGGGTCGTATATACCTTATATATATATATATATATATATCCTA
TCGGGAAGGGATTCTTGCCGAGGCCTTTCGTGTTTTGATTTTGTGTCGTC
GGAACCTTGATTTTGGACGTTTGTTGCGAACGTGTTTGTCCAGGGAGACG
TGGTTTTTGGTGCCATATGCCTCAAGAGCTGTTCATTACCTCACTAAGGC
GATTCTAGCTCGCGTTTACCATTTTTCCAGGCTTTTACTTTTCGTAAGCG
CCTTTTACCAAAAAATCGAACGAGGAGAAGGATACATGTAGATCCAATTG
CGTCCGTAAGTCTAGTTTTGAGGCGTCGAGAACAAGTTTTCGATCTCACC
ATGGTTTTCAATACCACACGGTTCGAGAAAGTACTTCTTTTTTTTTTGCT
CGACAAAAATCAAGTTCCGAGATTCAAGAGATGCGCCGTTCGCGAGCAGG
TCGAATTTTCTCTGAATTTGCTAAACAGGCTTGGGTCTCATTCATGGTGC
TGTGCTGTTTCTTGGGTTAGTGTTTGCCGTTGCGTTGCTCACGCGGGAGG
GCTCCAACAGGGCGCAAGATTTCGTGCAGAGCCAGAGAACTGGCGGACAA
ATGATCTTGGTTGATAAACACGGAAGTCCCAAATGCCCATTTTCCCATAA
AAATTTGCAACGATTTCACTTTTTCCGGCTGTGACGAGGTGAATCGAACT
CTTTTTCATGTGCAAAATCCCAACAGCGCAAAAATCACGATAGATTGGCG
TGTCTTGAAATAACGATGAAGAAATATTAAACATATCTTGCAC back to topCoding sequence (CDS) from alignment at H-paniculata_contig191:1864..12306+ >mRNA_H-paniculata_contig191.4785.1 ID=mRNA_H-paniculata_contig191.4785.1|Name=mRNA_H-paniculata_contig191.4785.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=642bp|location=Sequence derived from alignment at H-paniculata_contig191:1864..12306+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCTGTTAACGAGACGCGGCCGACTGTGGCCGACGTGGTATTCGCTGT
GAAGGAAGGAGCGACACCGTCGTCCGCCACCTTCATATTCGGATGGCTGT
TAACGAGACGCGGCCGACTGTGGCCGACGTGGTATTCGCTGTGAAGGAAG
GAGCGACACCGTCGTCCGCCACCTTCATATTCGGAAACGAAGACCACACT
CTGGGCAATGCGCTACGGCACGTGCTAATGCAGAACTCGGAGGTGGACTT
CTGCGGGTACAGCGTGCCGCACCCGTCCGAGCCCAAGATGAACCTGAGGT
TGCAGACGACAGAAACGAAGACCACACTCTGGGCAATGCGCTACGGCACG
TGCTAATGCAGAACTCGGAGGTGGACTTCTGCGGGTACAGCGTGCCGCAC
CCGTCCGAGCCCAAGATGAACCTGAGGTTGCAGACGACAGGCCGACCAGC
TCTGGCATTGCTCAAGGAAGGATTGAGAGACTTACGTGACTTGTGCGATC
TGTTGGAAGATCGGGTGGACGAAGAAATACCGGGCGTATAGGCCGACCAG
CTCTGGCATTGCTCAAGGAAGGATTGAGAGACTTACGTGACTTGTGCGAT
CTGTTGGAAGATCGGGTGGACGAAGAAATACCGGGCGTATAG back to top
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