prot_H-paniculata_contig19093.4784.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19093.4784.1
Unique Nameprot_H-paniculata_contig19093.4784.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length81
Homology
BLAST of mRNA_H-paniculata_contig19093.4784.1 vs. uniprot
Match: A0A182GR55_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GR55_AEDAL)

HSP 1 Score: 85.1 bits (209), Expect = 2.280e-19
Identity = 45/81 (55.56%), Postives = 58/81 (71.60%), Query Frame = 0
Query:    1 MEEEWEASVENGTWESEDLGRLAAGRKAIRTKWIFKRKLKEDGSVARNRARLVAQGFSQVEGEDFFETSAPVARTSTLRAV 81
            M++E++A +EN TWE   L  L AGRKAI +KWIFK K  E G++ R++ARLVAQGF+Q  G DF E  APVA+  TLR +
Sbjct:    1 MDDEYQAQIENNTWE---LVELPAGRKAIGSKWIFKSKEDEKGNIVRHKARLVAQGFNQKFGVDFDEVFAPVAKQVTLRTL 78          
BLAST of mRNA_H-paniculata_contig19093.4784.1 vs. uniprot
Match: UPI001AA0F8A7 (hypothetical protein n=1 Tax=Bacteroides uniformis TaxID=820 RepID=UPI001AA0F8A7)

HSP 1 Score: 82.4 bits (202), Expect = 1.080e-18
Identity = 40/81 (49.38%), Postives = 57/81 (70.37%), Query Frame = 0
Query:    1 MEEEWEASVENGTWESEDLGRLAAGRKAIRTKWIFKRKLKEDGSVARNRARLVAQGFSQVEGEDFFETSAPVARTSTLRAV 81
            M EE+ + +EN TW   DL  L  GRK +R +W++K K   DG V +N+ARL+A+GFSQVEG D+ ET +PVA+ +++R V
Sbjct:    4 MNEEYRSLLENNTW---DLVPLPKGRKFVRCRWVYKTKFGPDGKVDKNKARLIAKGFSQVEGIDYIETFSPVAKMNSIRLV 81          
BLAST of mRNA_H-paniculata_contig19093.4784.1 vs. uniprot
Match: A0A1J3IGB6_NOCCA (Copia protein (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3IGB6_NOCCA)

HSP 1 Score: 80.5 bits (197), Expect = 7.430e-18
Identity = 44/79 (55.70%), Postives = 52/79 (65.82%), Query Frame = 0
Query:    1 MEEEWEASVENGTWESEDLGRLAAGRKAIRTKWIFKRKLKEDGSVARNRARLVAQGFSQVEGEDFFETSAPVARTSTLR 79
            MEEE E  V N  WE   L  L  G   + TKWIFK K  + GS+ RN++RLVAQG+SQVEG DF ET APVAR  ++R
Sbjct:    2 MEEELEEFVRNDVWE---LVPLPDGVNVVGTKWIFKNKTNDAGSIVRNKSRLVAQGYSQVEGVDFDETFAPVARLESIR 77          
BLAST of mRNA_H-paniculata_contig19093.4784.1 vs. uniprot
Match: A0A177U0C1_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U0C1_9BASI)

HSP 1 Score: 85.9 bits (211), Expect = 9.280e-18
Identity = 46/81 (56.79%), Postives = 57/81 (70.37%), Query Frame = 0
Query:    1 MEEEWEASVENGTWESEDLGRLAAGRKAIRTKWIFKRKLKEDGSVARNRARLVAQGFSQVEGEDFFETSAPVARTSTLRAV 81
            M+E+ +A  +  TW   DL  L   RKA+ ++W++K KL EDG  AR +ARLVAQGFSQVEG DF ET APVAR  TLRA+
Sbjct:  731 MDEQLQALQDMHTW---DLMELPPNRKAVGSRWVYKLKLDEDGKAARRKARLVAQGFSQVEGIDFTETFAPVARLDTLRAL 808          
BLAST of mRNA_H-paniculata_contig19093.4784.1 vs. uniprot
Match: A0A6P9F263_JUGRE (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Juglans regia TaxID=51240 RepID=A0A6P9F263_JUGRE)

HSP 1 Score: 79.0 bits (193), Expect = 2.500e-17
Identity = 41/81 (50.62%), Postives = 55/81 (67.90%), Query Frame = 0
Query:    1 MEEEWEASVENGTWESEDLGRLAAGRKAIRTKWIFKRKLKEDGSVARNRARLVAQGFSQVEGEDFFETSAPVARTSTLRAV 81
            M  E +A  +N TW    L  L  G+K I  KW+FK KLK DGS+ R +ARLVA+G++QVEG D+ ET APVA+ +T+R +
Sbjct:    1 MSAELQALQDNSTW---TLEHLPPGKKPIGCKWVFKTKLKADGSIERYKARLVAKGYTQVEGLDYHETFAPVAKMTTVRCL 78          
BLAST of mRNA_H-paniculata_contig19093.4784.1 vs. uniprot
Match: A0A177TL22_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TL22_9BASI)

HSP 1 Score: 83.6 bits (205), Expect = 6.010e-17
Identity = 45/81 (55.56%), Postives = 56/81 (69.14%), Query Frame = 0
Query:    1 MEEEWEASVENGTWESEDLGRLAAGRKAIRTKWIFKRKLKEDGSVARNRARLVAQGFSQVEGEDFFETSAPVARTSTLRAV 81
            M+E+  A V   TW   DL  L AGRKAI ++W++K KL EDG   R +ARLVAQGF+QV G D+FET APVAR  +LR +
Sbjct:  652 MDEQMNALVGMHTW---DLVELPAGRKAIGSRWVYKLKLNEDGMADRWKARLVAQGFTQVAGVDYFETFAPVARLDSLRVI 729          
BLAST of mRNA_H-paniculata_contig19093.4784.1 vs. uniprot
Match: A0A177U0N4_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U0N4_9BASI)

HSP 1 Score: 83.6 bits (205), Expect = 6.010e-17
Identity = 45/81 (55.56%), Postives = 56/81 (69.14%), Query Frame = 0
Query:    1 MEEEWEASVENGTWESEDLGRLAAGRKAIRTKWIFKRKLKEDGSVARNRARLVAQGFSQVEGEDFFETSAPVARTSTLRAV 81
            M+E+  A V   TW   DL  L AGRKAI ++W++K KL EDG   R +ARLVAQGF+QV G D+FET APVAR  +LR +
Sbjct:  653 MDEQMNALVGMHTW---DLVELPAGRKAIGSRWVYKLKLNEDGMADRWKARLVAQGFTQVAGVDYFETFAPVARLDSLRVI 730          
BLAST of mRNA_H-paniculata_contig19093.4784.1 vs. uniprot
Match: UPI00090075D0 (uncharacterized protein LOC109136272 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00090075D0)

HSP 1 Score: 82.8 bits (203), Expect = 7.390e-17
Identity = 42/81 (51.85%), Postives = 60/81 (74.07%), Query Frame = 0
Query:    1 MEEEWEASVENGTWESEDLGRLAAGRKAIRTKWIFKRKLKEDGSVARNRARLVAQGFSQVEGEDFFETSAPVARTSTLRAV 81
            M +E +A  EN TW   DL  L +G+KAI +KW++K KLK DG++ R++ARLVA G+ QVEG+DF +T +PVA+ +T+R V
Sbjct:    1 MNKELKALEENETW---DLTVLPSGKKAIGSKWVYKTKLKPDGTIERHKARLVAIGYQQVEGQDFTQTFSPVAKLATVRIV 78          
BLAST of mRNA_H-paniculata_contig19093.4784.1 vs. uniprot
Match: A0A151SEK1_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SEK1_CAJCA)

HSP 1 Score: 79.0 bits (193), Expect = 1.050e-16
Identity = 40/81 (49.38%), Postives = 57/81 (70.37%), Query Frame = 0
Query:    1 MEEEWEASVENGTWESEDLGRLAAGRKAIRTKWIFKRKLKEDGSVARNRARLVAQGFSQVEGEDFFETSAPVARTSTLRAV 81
            M++E+ A ++N TW   DL  L  GR AI  KWIFK K K+DGS+ R++ARLVA+GFSQ +G D+ +T +PV +  ++R V
Sbjct:   37 MQDEYNALLKNHTW---DLVSLPPGRTAITCKWIFKNKYKQDGSILRHKARLVARGFSQQQGLDYTDTFSPVVKPVSIRIV 114          
BLAST of mRNA_H-paniculata_contig19093.4784.1 vs. uniprot
Match: A0A392R5K8_9FABA (Putative E3 ubiquitin-protein ligase LOG2 (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392R5K8_9FABA)

HSP 1 Score: 78.2 bits (191), Expect = 1.140e-16
Identity = 40/81 (49.38%), Postives = 58/81 (71.60%), Query Frame = 0
Query:    1 MEEEWEASVENGTWESEDLGRLAAGRKAIRTKWIFKRKLKEDGSVARNRARLVAQGFSQVEGEDFFETSAPVARTSTLRAV 81
            M +E EA  + GTW+  DL  LA   K I +KW++K K K DG++ R +ARLVA+G++QVEG DFF+T +PVA+ +T+R +
Sbjct:    1 MNDELEALTKTGTWKFVDLPPLA---KPIGSKWVYKVKYKADGTIERYKARLVAKGYTQVEGLDFFDTFSPVAKLTTVRTL 78          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19093.4784.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A182GR55_AEDAL2.280e-1955.56Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI001AA0F8A71.080e-1849.38hypothetical protein n=1 Tax=Bacteroides uniformis... [more]
A0A1J3IGB6_NOCCA7.430e-1855.70Copia protein (Fragment) n=1 Tax=Noccaea caerulesc... [more]
A0A177U0C1_9BASI9.280e-1856.79Integrase catalytic domain-containing protein n=2 ... [more]
A0A6P9F263_JUGRE2.500e-1750.62uncharacterized mitochondrial protein AtMg00820-li... [more]
A0A177TL22_9BASI6.010e-1755.56Integrase catalytic domain-containing protein n=1 ... [more]
A0A177U0N4_9BASI6.010e-1755.56Integrase catalytic domain-containing protein n=2 ... [more]
UPI00090075D07.390e-1751.85uncharacterized protein LOC109136272 n=1 Tax=Beta ... [more]
A0A151SEK1_CAJCA1.050e-1649.38Retrovirus-related Pol polyprotein from transposon... [more]
A0A392R5K8_9FABA1.140e-1649.38Putative E3 ubiquitin-protein ligase LOG2 (Fragmen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 21..79
e-value: 3.8E-14
score: 52.9
NoneNo IPR availablePANTHERPTHR11439:SF264coord: 1..79
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19093contigH-paniculata_contig19093:632..874 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19093.4784.1mRNA_H-paniculata_contig19093.4784.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19093 632..886 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19093.4784.1 ID=prot_H-paniculata_contig19093.4784.1|Name=mRNA_H-paniculata_contig19093.4784.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=81bp
MEEEWEASVENGTWESEDLGRLAAGRKAIRTKWIFKRKLKEDGSVARNRA
RLVAQGFSQVEGEDFFETSAPVARTSTLRAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like