prot_H-paniculata_contig19080.4782.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19080.4782.1
Unique Nameprot_H-paniculata_contig19080.4782.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length232
Homology
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BLAST of mRNA_H-paniculata_contig19080.4782.1 vs. uniprot
Match: A0A6H5JRQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRQ9_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 3.810e-11
Identity = 91/242 (37.60%), Postives = 108/242 (44.63%), Query Frame = 0 
Query:    1 EERLAAEAACLQRREEQHNIEKEAFRAKMRSVEGELRSRAEEELAXXXXXXXXXXXXXXXXXXXLLQRLARAEAVT----------RXXXXXXXXXXXXXXXXXXXXNAERSALDTRATLLAPQFRALEEGKSLLEDARREGCKLYWGRSAGSRRARSLAREESRRIADEARRVRETEAKSIEREAKAEAKWDETAVARRATKQMGRHLSQEVEALSEQRRAVELARVRLHEQQMEVTLQAS 232
            EERLAAEAA LQRREE H I+ EA RA++R +E E R+R EE+ +                   LL+R+A AE+            R          XXXXXXXXXX       D RA    P+ RA         DARR            +RR R                               E KW E   ARRA KQM R +  E E L+EQR+A+ LARVRLHE QME+ LQ S
Sbjct:  419 EERLAAEAASLQRREEAHKIDMEACRAQIRRMEAETRARVEEDASRERSTLTNAKSAFERERGELLRRVAAAESAGQAAIAEGFEFRRGVADGRGERXXXXXXXXXXXXXXXXXDARAAACCPRRRA--------SDARR----------VSTRRPRXXXXXXXXXXXX----XXXXXXXXXXXXXXXEVKWKEITTARRAIKQMERGVVNEAEGLAEQRKALALARVRLHEHQMEMVLQMS 638
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19080.4782.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JRQ9_9PHAE3.810e-1137.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 37..75
NoneNo IPR availableCOILSCoilCoilcoord: 150..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19080contigH-paniculata_contig19080:1..4555 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19080.4782.1mRNA_H-paniculata_contig19080.4782.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19080 1..4555 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19080.4782.1 ID=prot_H-paniculata_contig19080.4782.1|Name=mRNA_H-paniculata_contig19080.4782.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=232bp
EERLAAEAACLQRREEQHNIEKEAFRAKMRSVEGELRSRAEEELARVKTE
LSLAQSVLEQERTELLQRLARAEAVTRAREAEAESARSEIAASRNRVNAE
RSALDTRATLLAPQFRALEEGKSLLEDARREGCKLYWGRSAGSRRARSLA
REESRRIADEARRVRETEAKSIEREAKAEAKWDETAVARRATKQMGRHLS
QEVEALSEQRRAVELARVRLHEQQMEVTLQAS
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