prot_H-paniculata_contig19066.4780.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19066.4780.1
Unique Nameprot_H-paniculata_contig19066.4780.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length250
Homology
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BLAST of mRNA_H-paniculata_contig19066.4780.1 vs. uniprot
Match: A0A6H5LB52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB52_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 3.910e-36
Identity = 84/148 (56.76%), Postives = 103/148 (69.59%), Query Frame = 0 
Query:    2 IFLWGTDNGKVKFSMRPSDHDISQDVDEVSSIGGLTSVATLMERQRRKGLVTEDGDSVHSGGYLDRMEDLLADDQSATSPRWDGREFFAEERMGGVEDGSGTAVAADIPIVGNGEDAADASVKEDDDASEVATAAPSANLPEITATAE 149
            IF+WGT++GK KFSM+PSDH++SQ +DEVSSIGGLTSVA  M RQR+K     D DSV SGGYLDRM DLLA+D S     WDGRE+FAEERMGG +DGSGTA AA+  I  + E  + AS   D++A    TA       E++  +E
Sbjct:  362 IFIWGTESGKPKFSMKPSDHNVSQ-LDEVSSIGGLTSVARWMARQRKKDGKALDSDSVDSGGYLDRMRDLLAEDVSMCHVSWDGREYFAEERMGGSDDGSGTAQAANHTIDPDPEGGSAASADVDENAD---TAVAETTAQEVSVVSE 505
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BLAST of mRNA_H-paniculata_contig19066.4780.1 vs. uniprot
Match: D7FNP1_ECTSI (Similar to WD repeat domain 49 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNP1_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 1.850e-35
Identity = 74/106 (69.81%), Postives = 85/106 (80.19%), Query Frame = 0 
Query:    2 IFLWGTDNGKVKFSMRPSDHDISQDVDEVSSIGGLTSVATLMERQRRKGLVTEDGDSVHSGGYLDRMEDLLADDQSATSPRWDGREFFAEERMGGVEDGSGTAVAA 107
            IF+WGTD+GK KFSM+PSDHD+SQ +DEVSSIGGLTSVA  M RQR+K     D DSV+SGGYLDRM  LLA+D S     WDGR++FAEERMGG +DGSGTA AA
Sbjct:  433 IFIWGTDSGKPKFSMKPSDHDVSQ-LDEVSSIGGLTSVAWWMARQRKKDGKVLDSDSVNSGGYLDRMGGLLAEDASMCHVSWDGRQYFAEERMGGSDDGSGTAQAA 537
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19066.4780.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LB52_9PHAE3.910e-3656.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNP1_ECTSI1.850e-3569.81Similar to WD repeat domain 49 n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19066contigH-paniculata_contig19066:2045..3705 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19066.4780.1mRNA_H-paniculata_contig19066.4780.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19066 2025..3705 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19066.4780.1 ID=prot_H-paniculata_contig19066.4780.1|Name=mRNA_H-paniculata_contig19066.4780.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=250bp
MIFLWGTDNGKVKFSMRPSDHDISQDVDEVSSIGGLTSVATLMERQRRKG
LVTEDGDSVHSGGYLDRMEDLLADDQSATSPRWDGREFFAEERMGGVEDG
SGTAVAADIPIVGNGEDAADASVKEDDDASEVATAAPSANLPEITATAEN
NPAAAAAAAADDDNGNFYGVEQPPMDTSAFVLPDTLNKAAAKNVKNGHLA
GSSRGGDGVAASPSTNGERRQDPLLPRSVAGGFDGSGLSEEKYGERGKHS
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