mRNA_H-paniculata_contig1906.4776.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1906.4776.1
Unique NamemRNA_H-paniculata_contig1906.4776.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig1906.4776.1 vs. uniprot
Match: D8LJF5_ECTSI (Importin subunit alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJF5_ECTSI)

HSP 1 Score: 712 bits (1837), Expect = 7.960e-242
Identity = 499/574 (86.93%), Postives = 516/574 (89.90%), Query Frame = 3
Query:  246 MANFVAKDNKESERAKVFKAGVGRDEARRGRNETQVQIRKEKKEERLNQRRRKGVGGAGNSL---SFGAIPEGGPAASLGPGGSAVDAGTQMRLDQLPQLVIGVQSLDANTQLETTTSFRKILSIGKSSFTIEQKRNPPIQNVIDAGVVPKFVEFLQRDDNPALQFESAWALTNIASGTSDHTRVVIEKGAVPIFVRLLMSPNDDVREQAVXXXXXXXGDSPVCRDLVLQQGAMGPLLQQLTDRSKLSMLRNATWTLSNFCRGKPQPSFEHVRPALPTLAQLIHSVDEEVLTDACWALSYLSDGQNDKIQAVIEAGVCQRLVELLIHTSPAVQTPALRTVGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKPEQIKYLVQQGCIPPLCDLLEVHDAKIVTVALEGLENILKVGDTEAKAQGQEMNQMATYIMECGGMERIEHLQMHDNNNIYNKALKLLERYFGVEDEEDNSIAPTVTGDTPQFSFGTLPQPPQGG-DGFAAPQPGQG-FNFG 1952
            MA+++ KD KE+ERAK+FKAGVGRDEARRGR+ETQVQIRKEKKEERLNQRRRKG   AG++L   SF  IPEGG  A+   G +AVD    MRLDQLPQLVIGVQSLD + QL+TTT+FRKILSI         +RNPPIQNVIDAGVVPKFVEFLQRDDNPALQFESAWALTNIASGTSDHTRVVIEKGAVPIFVRLLMSPNDDVREQAVXXXXXXX DSPVCRDLVLQQGAMGPLLQQLTDRSKLSMLRNATWTLSNFCRGKPQPSFEHVRPALPTLAQLIHSVDEEVLTDACWALSYLSDGQNDKIQAVIEAGVCQRLVELLIHTSPAVQTPALRTVGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GKPEQIKYLV +GCIPPL DLLEVHDAKIVTVALEGLENILK GDTEAKAQGQE+NQMATYIMECGGMERIE LQMHDNNNIYNKALKLLERYFGVEDEEDN IAP       QF+FG   QP Q G D     QP QG FNFG
Sbjct:    1 MASYMGKD-KEAERAKLFKAGVGRDEARRGRSETQVQIRKEKKEERLNQRRRKGA--AGDTLGAFSFATIPEGGAPAA---GTNAVDTPAHMRLDQLPQLVIGVQSLDPSVQLDTTTAFRKILSI---------ERNPPIQNVIDAGVVPKFVEFLQRDDNPALQFESAWALTNIASGTSDHTRVVIEKGAVPIFVRLLMSPNDDVREQAVXXXXXXXXDSPVCRDLVLQQGAMGPLLQQLTDRSKLSMLRNATWTLSNFCRGKPQPSFEHVRPALPTLAQLIHSVDEEVLTDACWALSYLSDGQNDKIQAVIEAGVCQRLVELLIHTSPAVQTPALRTVGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKPEQIKYLVTEGCIPPLSDLLEVHDAKIVTVALEGLENILKTGDTEAKAQGQEINQMATYIMECGGMERIEQLQMHDNNNIYNKALKLLERYFGVEDEEDNGIAPLEAEGAQQFAFG---QPTQAGTDTTFGAQPNQGGFNFG 556          
BLAST of mRNA_H-paniculata_contig1906.4776.1 vs. uniprot
Match: A0A835Z4P4_9STRA (Importin subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4P4_9STRA)

HSP 1 Score: 547 bits (1410), Expect = 2.280e-178
Identity = 407/559 (72.81%), Postives = 445/559 (79.61%), Query Frame = 3
Query:  276 ESERAKVFKAGVGRDEARRGRNETQVQIRKEKKEERLNQRRRKGVGGAGNSLSFGAIPEGGPAASLGPGGSAVDAGTQMRLDQLPQLVIGVQSLDANTQLETTTSFRKILSIGKSSFTIEQKRNPPIQNVIDAGVVPKFVEFLQRDDNPALQFESAWALTNIASGTSDHTRVVIEKGAVPIFVRLLMSPNDDVREQAVXXXXXXXGDSPVCRDLVLQQGAMGPLLQQLTDRSKLSMLRNATWTLSNFCRGKPQPSFEHVRPALPTLAQLIHSVDEEVLTDACWALSYLSDGQNDKIQAVIEAGVCQRLVELLIHTSPAVQTPALRTVGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKPEQIKYLVQQGCIPPLCDLLEVHDAKIVTVALEGLENILKVGDTEAKAQGQEMNQMATYIMECGGMERIEHLQMHDNNNIYNKALKLLERYFGVEDEEDNSIAPTVTGDTPQFSFGTLPQPPQGGDGFAAPQPGQGFNFG 1952
            + ER K +K GV +D+ARR R ETQ+Q+RK KK+ERLNQRR+ G    G   +FG  P             +VD     RL+QLPQLV G+ S D    L+ TT+FRK+LSI         +RNPPIQ VIDAGVVP+FVEFLQ+D NPALQFE+AWALTNIASGTS+HTRVVIE GAVPIFVRLL SPNDDVREQ  XXXXXXX DSP CRD VLQ G+M PLL QLT+RSKLSMLRNATWTLSNFCRGKPQP FE VRPALP LAQLIHSVDEEVLTDACWALSYLSDG NDKIQAVIEAGVCQRLVELL+H SP+VQTPALRTVGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GGK EQIK+              +V DAKIVTVALEGLENILKVG+T+AKAQG + N MATYI E GGM++IE+LQMHDN +IYNKALK+L +YFG EDEED ++AP   G T  FSFG  P    GG  F   QP QG+NFG
Sbjct:    8 KEERKKAYKKGVSQDDARRRREETQIQVRKTKKDERLNQRRKMGPSTVG---AFGGAP-------------SVDPNIAQRLEQLPQLVAGLMSADPALHLDMTTAFRKLLSI---------ERNPPIQQVIDAGVVPRFVEFLQQDANPALQFEAAWALTNIASGTSEHTRVVIEVGAVPIFVRLLSSPNDDVREQXXXXXXXXXXDSPECRDGVLQHGSMQPLLAQLTERSKLSMLRNATWTLSNFCRGKPQPDFERVRPALPALAQLIHSVDEEVLTDACWALSYLSDGSNDKIQAVIEAGVCQRLVELLMHQSPSVQTPALRTVGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGKNEQIKFXXXXXXXXXXXXXXQVQDAKIVTVALEGLENILKVGETDAKAQGTDQNMMATYIAEAGGMDKIENLQMHDNLSIYNKALKILTKYFGAEDEEDAALAPATDGAT--FSFGQPPAGGAGGAAFGGNQPVQGYNFG 539          
BLAST of mRNA_H-paniculata_contig1906.4776.1 vs. uniprot
Match: A0A7S2P4N2_9STRA (Importin subunit alpha n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P4N2_9STRA)

HSP 1 Score: 461 bits (1187), Expect = 1.410e-145
Identity = 367/560 (65.54%), Postives = 410/560 (73.21%), Query Frame = 3
Query:  273 KESERAKVFKAGVGRDEARRGRNETQVQIRKEKKEERLNQRRRKGVGGAGNSLSFGAIPEGGPAASLGPGGSAVDAGTQMRLDQLPQLVIGVQSLDANTQLETTTSFRKILSIGKSSFTIEQKRNPPIQNVIDAGVVPKFVEFLQRDDNPALQFESAWALTNIASGTSDHTRVVIEKGAVPIFVRLLMSPNDDVREQAVXXXXXXXGDSPVCRDLVLQQGAMGPLLQQLTDRSKLSMLRNATWTLSNFCRGKPQPSFEHVRPALPTLAQLIHSVDEEVLTDACWALSYLSDGQNDKIQAVIEAGVCQRLVELLIHTSPAVQTPALRTVGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKPEQIKYLVQQGCIPPLCDLLEVHDAKIVTVALEGLENILKVGDTEAKAQGQEMNQMATYIMECGGMERIEHLQMHDNNNIYNKALKLLERYFGVEDEEDNSIAPTVTGDTPQFSFGTLPQPPQGGDGFAAPQPGQGFNFG 1952
            KE+ER   +K  +  ++ARR R ET +QIRK KK+  LN+RR+  +      L+   + +G  A  +     A   G   +L+ LPQ+V GV   D   Q E TT+FR++LSI K         NPPIQ VID+GVVP+FVEFLQRDDNPALQFE+AWALTNIASGTS+HT VV+E GAVPIF RLLMSPNDDVREQAV       GDSP CRDLVL   AM PLLQQL   SKLSMLRNATWTLSNFCRGKPQP+FE VRPALPTLAQLI S DEEVLTDACWALSYLSDG N+KIQAVIEAGVC+RLVE                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G   QIK+LVQQGCI PLCDLL V+DAKIV VALEGLENILKVG+ +AK  G   NQMATYI E  G+ +IE+LQ HDNN+IY K +K+LE YFGVEDEED  +AP +      ++FG            A    GQ F+FG
Sbjct:    4 KENERKATYKKTIDSEDARRRRTETTIQIRKTKKDAHLNKRRQ--MPSVTTPLAEAHVVDGNNAPLVS--AVAFGNGNASKLENLPQMVNGVMGNDPAQQTECTTAFRRLLSIEK---------NPPIQQVIDSGVVPRFVEFLQRDDNPALQFEAAWALTNIASGTSEHTGVVMEMGAVPIFCRLLMSPNDDVREQAVWALGNIAGDSPPCRDLVLNADAMLPLLQQLHQNSKLSMLRNATWTLSNFCRGKPQPNFEMVRPALPTLAQLIFSPDEEVLTDACWALSYLSDGPNEKIQAVIEAGVCRRLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNTTQIKFLVQQGCIRPLCDLLTVNDAKIVHVALEGLENILKVGEADAKVSGTH-NQMATYIAEAEGLNKIENLQQHDNNDIYEKCIKILETYFGVEDEEDPDLAPQMGEGGQSYAFG------------AGQMQGQQFDFG 537          
BLAST of mRNA_H-paniculata_contig1906.4776.1 vs. uniprot
Match: A0A7S0CK65_9STRA (Importin subunit alpha n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CK65_9STRA)

HSP 1 Score: 457 bits (1176), Expect = 5.860e-144
Identity = 365/546 (66.85%), Postives = 406/546 (74.36%), Query Frame = 3
Query:  279 SERAKVFKAGVGRDEARRGRNETQVQIRKEKKEERLNQRRRKGVGGAGNSLSFGAIPEGGPAA-----------SLGPGGSAVDAGTQMRLDQLPQLVIGVQSLDANTQLETTTSFRKILSIGKSSFTIEQKRNPPIQNVIDAGVVPKFVEFLQRDDNPALQFESAWALTNIASGTSDHTRVVIEKGAVPIFVRLLMSPNDDVREQAVXXXXXXXGDSPVCRDLVLQQGAMGPLLQQLTDRSKLSMLRNATWTLSNFCRGKPQPSFEHVRPALPTLAQLIHSVDEEVLTDACWALSYLSDGQNDKIQAVIEAGVCQRLVELLIHTSPAVQTPALRTVGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKPEQIKYLVQQGCIPPLCDLLEVHDAKIVTVALEGLENILKVGDTEAKAQGQEMNQMATYIMECGGMERIEHLQMHDNNNIYNKALKLLERYFGVEDEEDN-SIAPTVTGDTPQFSFG 1880
            S+R K FK  +  DE RR R ET +QIRK KK+  LN+RR+         +     PE G ++           ++  GG+A       +L+ LPQ+V GV + DA  Q E TT FR++LSI K         NPPIQ VIDAGVVP+FVEFLQRDDNPALQFE+AWALTNIASGTS+HT VV+E GAVPIF RLL+SPNDDVREQA XXXXXXXGDSP CRDLVL  GAM PLLQQL   SKLSMLRNATWTLSNFCRGKPQP F  VRPALPTLAQLI S DEEVLTDACWALSYLSDG N+KIQAVIEAGVC+RLVE                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   GG  EQIK+LVQQGCI PLCDLL V D KIVT+ALEGLENILKVG+ ++++   E NQMAT+I E  G+ +IE LQ HDNN+IY K +K+LE YFGVEDEE+   +AP        F+FG
Sbjct:    4 SQRKKAFKKTIDVDENRRRREETTLQIRKTKKDAHLNKRRQ---------IPANFAPEAGDSSLTNGMDMMDSQNMQVGGTAAPMTATSKLENLPQMVQGVMTDDAQQQTECTTQFRRLLSIEK---------NPPIQQVIDAGVVPRFVEFLQRDDNPALQFEAAWALTNIASGTSEHTAVVMESGAVPIFCRLLLSPNDDVREQAXXXXXXXXGDSPPCRDLVLMAGAMQPLLQQLHQNSKLSMLRNATWTLSNFCRGKPQPDFNMVRPALPTLAQLIFSPDEEVLTDACWALSYLSDGPNEKIQAVIEAGVCRRLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATSGGNAEQIKFLVQQGCIRPLCDLLTVADTKIVTIALEGLENILKVGENDSQSSN-EHNQMATFIAEADGLTKIEQLQQHDNNDIYEKCVKILETYFGVEDEEEMPGLAPATAESGETFAFG 530          
BLAST of mRNA_H-paniculata_contig1906.4776.1 vs. uniprot
Match: A0A8K1FCP4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FCP4_PYTOL)

HSP 1 Score: 455 bits (1170), Expect = 3.280e-143
Identity = 327/536 (61.01%), Postives = 380/536 (70.90%), Query Frame = 3
Query:  273 KESERAKVFKAGVGRDEARRGRNETQVQIRKEKKEERLNQRRRKGVGGAGNSLSFGAIPEGGPAASLGPGGSAVDAGTQMRLDQLPQLVIGVQSLDANTQLETTTSFRKILSIGKSSFTIEQKRNPPIQNVIDAGVVPKFVEFLQRDDNPALQFESAWALTNIASGTSDHTRVVIEKGAVPIFVRLLMSPNDDVREQAVXXXXXXXGDSPVCRDLVLQQGAMGPLLQQLTDRSKLSMLRNATWTLSNFCRGKPQPSFEHVRPALPTLAQLIHSVDEEVLTDACWALSYLSDGQNDKIQAVIEAGVCQRLVELLIHTSPAVQTPALRTVGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKPEQIKYLVQQGCIPPLCDLLEVHDAKIVTVALEGLENILKVGDTEAKAQGQEMNQMATYIMECGGMERIEHLQMHDNNNIYNKALKLLERYFGVEDEEDNSIAPTVTGDTPQFSFG 1880
            K  ER   FK  +  DE RR R+ET VQIRK  KE+RLNQRRR  +GGA      G +  GG A      G  ++     RL +LP +V GV + +   QL+  T FRK+LSI         +RNPPI+ VI  GVVP FV+FLQRDD P LQFE+AWALTNIASGTSD T VVI  GAVPIFV+LL+S NDDVREQAV       GDS  CRD+VL+ GA+ PLL QLT+ +K +MLRNATWTLSNFCRG+PQP FE V+PALPTL QLI++ DEEVLTDACWALSYLSDG N+KIQAVIEAGVC+R+VELL+H SP+VQTPALRT+GNI                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G  EQI YLV+QGCI PLCDLL   DAK+V VALEGLEN+L+VG+ + K  G E N MAT + E  G+ +I+ LQ H N +IY K+LK++E YF  E+E +  +APTV     QF+FG
Sbjct:    7 KAPERKNYFKKTIDADEIRRRRSETTVQIRKTVKEDRLNQRRR--MGGADG---MGMVAAGGAA------GENLEMSLSQRLSELPLMVQGVHATEREVQLDAVTKFRKLLSI---------ERNPPIKEVISTGVVPIFVQFLQRDDFPELQFEAAWALTNIASGTSDDTAVVINHGAVPIFVKLLLSTNDDVREQAVWALGNIAGDSVECRDMVLRCGALRPLLGQLTENAKPTMLRNATWTLSNFCRGRPQPQFELVQPALPTLGQLIYTNDEEVLTDACWALSYLSDGTNEKIQAVIEAGVCRRIVELLMHHSPSVQTPALRTIGNIVTGDDLQTQVIINLQALPCLRALLDSPKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSAEQIMYLVEQGCIKPLCDLLAASDAKVVIVALEGLENVLRVGEGQ-KGVG-EFNPMATLVDEAEGVPKIQALQFHANEDIYQKSLKIVETYFQGEEEVEQPLAPTVDASAQQFTFG 520          
BLAST of mRNA_H-paniculata_contig1906.4776.1 vs. uniprot
Match: A0A7S0X4A9_9CHLO (Importin subunit alpha n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0X4A9_9CHLO)

HSP 1 Score: 453 bits (1165), Expect = 1.650e-142
Identity = 308/545 (56.51%), Postives = 367/545 (67.34%), Query Frame = 3
Query:  285 RAKVFKAGVGRDEARRGRNETQVQIRKEKKEERLNQRRRKGVGGAGNSLSFGAIPEGGPAASLGPGGSAVDAGTQMRLDQLPQLVIGVQSLDANTQLETTTSFRKILSIGKSSFTIEQKRNPPIQNVIDAGVVPKFVEFLQRDDNPALQFESAWALTNIASGTSDHTRVVIEKGAVPIFVRLLMSPNDDVREQAVXXXXXXXGDSPVCRDLVLQQGAMGPLLQQLTDRSKLSMLRNATWTLSNFCRGKPQPSFEHVRPALPTLAQLIHSVDEEVLTDACWALSYLSDGQNDKIQAVIEAGVCQRLVELLIHTSPAVQTPALRTVGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-GKPEQIKYLVQQGCIPPLCDLLEVHDAKIVTVALEGLENILKVGDTEAKAQGQEMNQMATYIMECGGMERIEHLQMHDNNNIYNKALKLLERYFGVEDEEDNSIAPTVTGDTPQFSFGTLPQPPQGGDGF 1916
            R K FK  +  +EARR R E  +QIRK+K+EE + ++RR G  G  +S    A+P  G   +              +L+ LPQ+V GV++ D   QLE TT FRK+LSI         +R PPI+ VI AGVVP FV FL+R++ P LQFE+AWALTNIASGTS++T VVI+ GAVPIFV LL SP+DDVREQAV       GDSP CRD+VL Q A+ PLL+QL + SKL+MLRNATWTLSNFCRGKPQP F+ +R ALP LA+L+HS DEEVLTDACWALSYLSDG NDKIQAVIEAGVC+RLVELL    P+V  PALRTVGNI                                      XXXXXXXXXXXXXXXXXXXXXXXXXX         XXXXXXXXXXXXX  G  +Q+KYLV QGCI PLCDL+   DA+IVTVALEGLENILKVG+ + K +G   NQ A +I E  G+E+I   Q H+NN+IY+KA+K+LE YFG+EDEED ++AP +  +  QF+F   P  PQGG  F
Sbjct:   11 RKKSFKKSIDPEEARRKREEGMIQIRKDKREEAVQKKRRDGNPGESDST---ALPNSGSVLA--------------KLESLPQMVQGVKTDDPRVQLEATTQFRKLLSI---------ERAPPIEEVIKAGVVPYFVAFLKREEFPQLQFEAAWALTNIASGTSENTGVVIDSGAVPIFVTLLRSPSDDVREQAVWALGNIAGDSPKCRDMVLAQNALHPLLEQLNEHSKLTMLRNATWTLSNFCRGKPQPQFDQLRDALPALARLVHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCRRLVELLGSKHPSVLIPALRTVGNIVTGDDYQTQIIINCRALPSLLALLTAEHKKSIKKEACWXXXXXXXXXXXXXXXXXXXXXXXXXXYLLANAEFDXXXXXXXXXXXXXXXGTHQQLKYLVDQGCIKPLCDLIVCSDARIVTVALEGLENILKVGEVD-KVEGSP-NQYAQFIDEAEGLEKIXXXQNHNNNDIYDKAMKILEEYFGLEDEEDQNLAPAMDANANQFAFQAAPMVPQGGFDF 527          
BLAST of mRNA_H-paniculata_contig1906.4776.1 vs. uniprot
Match: C1MLU3_MICPC (Importin subunit alpha n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MLU3_MICPC)

HSP 1 Score: 452 bits (1163), Expect = 3.230e-142
Identity = 319/549 (58.11%), Postives = 376/549 (68.49%), Query Frame = 3
Query:  285 RAKVFKAGVGRDEARRGRNETQVQIRKEKKEERLNQRRRKGVGGAGNSLSFGAIPEGGPAASLGPGGSAVDAGTQMRLDQLPQLVIGVQSLDANTQLETTTSFRKILSIGKSSFTIEQKRNPPIQNVIDAGVVPKFVEFLQRDDNPALQFESAWALTNIASGTSDHTRVVIEKGAVPIFVRLLMSPNDDVREQAVXXXXXXXGDSPVCRDLVLQQGAMGPLLQQLTDRSKLSMLRNATWTLSNFCRGKPQPSFEHVRPALPTLAQLIHSVDEEVLTDACWALSYLSDGQNDKIQAVIEAGVCQRLVELLIHTSPAVQTPALRTVGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKP-EQIKYLVQQGCIPPLCDLLEVHDAKIVTVALEGLENILKVGDTEAKAQGQEMNQMATYIMECGGMERIEHLQMHDNNNIYNKALKLLERYFGVEDEEDNSIAPTVTGDTPQFSFGTLPQPPQGGDGFAAPQ 1928
            R K FK     DEARR R E  +QIRK+K+EE + ++RR                +G    ++G   SA  +    RL+ LP +  GV+S D   QLE TT FRK+LSI         +R PPI+ VI AGVVP FVEFL+R++ P LQFE+AWALTNIASGTS++T VVI+ GAVPIFV LL SP+DDVREQAVXXXXXXXGDSP CRD+VL   A+GPLL+QL + SKL+MLRNATWTLSNFCRGKPQP F+ +R ALP LA+L+HS DEEVLTDACWALSYLSDG NDKIQAVIEAGVC+RLVELL   +P+V  PALRTVGNI                                      XXXXXXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXXXX     +QIKYLV+QG I PLCDL+   DA+IVTVALEGLENILKVG+   K +G   NQ A +I E  G+E+IE+LQ H+NN+IY+KA+K+LE YFG+EDEED ++AP    +  QF+F   P  PQGG  F+  Q
Sbjct:   11 RKKGFKKATDADEARRKREEGMIQIRKDKREEAMLKKRR--------------FADGMGVTAVGEDSSATTS--VARLEMLPTMCEGVRSQDPAAQLEATTQFRKLLSI---------ERAPPIEEVIRAGVVPYFVEFLKREEFPQLQFEAAWALTNIASGTSENTGVVIDSGAVPIFVALLRSPSDDVREQAVXXXXXXXGDSPKCRDMVLSTNALGPLLEQLNEHSKLTMLRNATWTLSNFCRGKPQPQFDQLRDALPALARLVHSSDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCRRLVELLGRPTPSVLIPALRTVGNIVTGDDYQTQIIINCRALPSLLALLTTDHKKSIKKEACWXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQHAEFDXXXXXXXXXXXXXXXXTHQQIKYLVEQGAIKPLCDLIVCSDARIVTVALEGLENILKVGEA-MKTEGSP-NQFAQFIDEADGLEKIENLQNHNNNDIYDKAMKILEEYFGLEDEEDQNLAPAADANAAQFAFNPQPAAPQGGFDFSGMQ 532          
BLAST of mRNA_H-paniculata_contig1906.4776.1 vs. uniprot
Match: A0A830HJH5_9CHLO (Importin subunit alpha n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HJH5_9CHLO)

HSP 1 Score: 453 bits (1165), Expect = 4.090e-142
Identity = 315/566 (55.65%), Postives = 376/566 (66.43%), Query Frame = 3
Query:  270 NKESERAKVFKAGVGRDEARRGRNETQVQIRKEKKEERLNQRR----RKGVGGAGNSLSFGAIPEGGPAASLGPGGSAVDAGTQMRLDQLPQLVIGVQSLDANTQLETTTSFRKILSIGKSSFTIEQKRNPPIQNVIDAGVVPKFVEFLQRDDNPALQFESAWALTNIASGTSDHTRVVIEKGAVPIFVRLLMSPNDDVREQAVXXXXXXXGDSPVCRDLVLQQGAMGPLLQQLTDRSKLSMLRNATWTLSNFCRGKPQPSFEHVRPALPTLAQLIHSVDEEVLTDACWALSYLSDGQNDKIQAVIEAGVCQRLVELLIHTSPAVQTPALRTVGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGK-PEQIKYLVQQGCIPPLCDLLEVHDAKIVTVALEGLENILKVGDTEAKAQGQEMNQMATYIMECGGMERIEHLQMHDNNNIYNKALKLLERYFGVEDEEDNSIAPTVTGDTPQFSFGTLPQPPQGGDGFAAPQPGQGFNFG 1952
            +++  R K FK  +  +E+RR R ++ VQIRK+K+EE L ++R        GGA   +S  ++  G PA +         AG   +L+ LP++V GV S D   QLE+T  FRK+LSI         +R+PPI+ VI AGVVP+ V FLQR D P LQFE+AWALTNIASGTS+HTRVVIE  AVPIFV+LL SP+DDVREQAV       GDSP CRDLVL  GA+ PLL QL + +K+SMLRNATWTLSNFCRGKPQP+FE  RPALP LA+LIHS DEEVLTDACWALSYLSDG NDKIQAVI+AGV +RLVELL+H S AV  PALRTVGNI                                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXXXXXXXX    PEQIK+LV  GCI PLCDLL   D +IVTVALEGLENIL++G+ + +A   + N     I + GG++ IE LQ H NN+IY+K +KLLE Y G+E+EED ++AP++     Q++FG    P   G       P  GFNFG
Sbjct:    8 SRQDARKKGFKKSIDVEESRRKREDSFVQIRKDKREESLQKKRVTMSETMFGGAPGDVSESSVRAGDPAGA---------AGGTAKLESLPEMVQGVCSEDPKVQLESTMQFRKLLSI---------ERSPPIEAVIKAGVVPRLVAFLQRVDLPQLQFEAAWALTNIASGTSEHTRVVIEYNAVPIFVQLLQSPSDDVREQAVWALGNIAGDSPKCRDLVLGHGALFPLLSQLNEHAKISMLRNATWTLSNFCRGKPQPNFEQARPALPALAKLIHSTDEEVLTDACWALSYLSDGTNDKIQAVIDAGVARRLVELLLHNSAAVLIPALRTVGNIVTGDDVQTQIVINCQALPCLLNLLQQGHKKSIKKEACWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEFDXXXXXXXXXXXXXXXXTPEQIKFLVSSGCIKPLCDLLTCGDNRIVTVALEGLENILRIGEEDKRAGIMDQNPFVQEIDQVGGLDLIEQLQNHPNNDIYDKCVKLLETYIGLEEEEDQNLAPSMDEGANQYTFGA---PAAAGAPVMGSMPAGGFNFG 552          
BLAST of mRNA_H-paniculata_contig1906.4776.1 vs. uniprot
Match: K3X3Z2_GLOUD (Importin subunit alpha n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3Z2_GLOUD)

HSP 1 Score: 449 bits (1154), Expect = 6.620e-141
Identity = 353/538 (65.61%), Postives = 400/538 (74.35%), Query Frame = 3
Query:  273 KESERAKVFKAGVGRDEARRGRNETQVQIRKEKKEERLNQRRRKGVGGA-GNSLSFGAIPEGGPAASLGPGGSAVDAGTQMRLDQLPQLVIGVQSLDANTQLETTTSFRKILSIGKSSFTIEQKRNPPIQNVIDAGVVPKFVEFLQRDDNPALQFESAWALTNIASGTSDHTRVVIEKGAVPIFVRLLMSPNDDVREQAVXXXXXXXGDSPVCRDLVLQQGAMGPLLQQLTDRSKLSMLRNATWTLSNFCRGKPQPSFEHVRPALPTLAQLIHSVDEEVLTDACWALSYLSDGQNDKIQAVIEAGVCQRLVELLIHTSPAVQTPALRTVGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKPEQIKYLVQQGCIPPLCDLLEVHDAKIVTVALEGLENILKVGDTEAKAQGQEMNQMATYIMECGGMERIEHLQMHDNNNIYNKALKLLERYFGVEDEEDNSIAPTVTGDTPQFSFGT 1883
            K  ER   FK  +  DE RR R+ET VQIRK  KE+R+NQRRR G   A     S G    G             D     RL +LP +V GVQS D  TQLE  T FRK+LSI         +RNPPI+ VI+ GVVP FV+FLQR+D P LQFE+AWALTNIASGTS  T VVI  GAVPIFV LL+S NDDVREQAV       GDS  CRD+VL+ G + PL+QQL+  SK +MLRNATWTLSNFCRGKPQP FE V PALPTL QLI + DEEVLTDACWALSYLSDG N+KIQAVIEAGVC+R+VELL+H SP+VQTPALRTVGNI  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G PEQI +LVQ GCI PLCDLLEV DAK+V VALEGLENIL+VG+ +      E+N++AT I E  G+ +I+ LQ H N +IY K++K++E YF  E++ ++S+ P       QF FGT
Sbjct:    7 KAPERKNFFKKTLDADEIRRRRSETTVQIRKTIKEDRMNQRRRMGADTAFAEETSMGGETPG-------------DLTLAQRLAELPLMVQGVQSADPATQLEAVTKFRKLLSI---------ERNPPIKEVIETGVVPLFVQFLQREDYPTLQFEAAWALTNIASGTSADTEVVINHGAVPIFVELLLSTNDDVREQAVWALGNIAGDSIECRDMVLRCGGLRPLMQQLSQNSKPTMLRNATWTLSNFCRGKPQPQFELVSPALPTLGQLIFTQDEEVLTDACWALSYLSDGSNEKIQAVIEAGVCRRVVELLMHPSPSVQTPALRTVGNIVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPEQIMHLVQLGCIKPLCDLLEVKDAKVVIVALEGLENILRVGEQQKTG---ELNEIATLIDEVDGVNKIQALQYHANEDIYVKSMKIVELYFQGEEDAEDSLVPDTDESAGQFQFGT 519          
BLAST of mRNA_H-paniculata_contig1906.4776.1 vs. uniprot
Match: A0A7S0D3V3_MICPS (Importin subunit alpha n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D3V3_MICPS)

HSP 1 Score: 444 bits (1141), Expect = 5.180e-139
Identity = 315/550 (57.27%), Postives = 370/550 (67.27%), Query Frame = 3
Query:  285 RAKVFKAGVGRDEARRGRNETQVQIRKEKKEERLNQRRRKGVGGAGNSLSFGAIPEGGPAASL-GPGGSAVDAGTQMRLDQLPQLVIGVQSLDANTQLETTTSFRKILSIGKSSFTIEQKRNPPIQNVIDAGVVPKFVEFLQRDDNPALQFESAWALTNIASGTSDHTRVVIEKGAVPIFVRLLMSPNDDVREQAVXXXXXXXGDSPVCRDLVLQQGAMGPLLQQLTDRSKLSMLRNATWTLSNFCRGKPQPSFEHVRPALPTLAQLIHSVDEEVLTDACWALSYLSDGQNDKIQAVIEAGVCQRLVELLIHTSPAVQTPALRTVGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-GKPEQIKYLVQQGCIPPLCDLLEVHDAKIVTVALEGLENILKVGDTEAKAQGQEMNQMATYIMECGGMERIEHLQMHDNNNIYNKALKLLERYFGVEDEEDNSIAPTVTGDTPQFSFGTLPQPPQGGDGFAAPQ 1928
            R K FK     DEARR R E  +QIRK+K+E    ++RR G G         A+   G +++L G GG+A       +L+ LPQ+V GVQS +A  QLE TT FRK+LSI         +R PPI+ VI AGVVP FVEFL+R++ P LQFE+AWALTNIASGTS++T VVI+ GAVPIFV+LL SP+DDVREQAV       GDSP CRD+VL   ++ PLLQQL   SKL+MLRNATWTLSNFCRGKPQP F+ +R ALP LA+L+HS DEEVLTDACWALSYLSDG NDKIQAVIEAGVC+RLVELL     +V  PALRTVGNI                                      XXXXXXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXXXX  G  EQI YLV QG I PLCDL+   DA+IVTVALEGLENILKVG+   +A G   NQ A +I E  G+E+IE+LQ H+NN+IY+KA+K++E YFG+EDEED ++AP +     QF+F   P  P GG  F   Q
Sbjct:   11 RKKGFKKATDADEARRKREEGMIQIRKDKREXXXXKKRRDGAG---------ALAAAGDSSALTGSGGTA-------KLESLPQMVQGVQSDNAQMQLEATTQFRKLLSI---------ERAPPIEEVIRAGVVPYFVEFLKREEFPQLQFEAAWALTNIASGTSENTGVVIDSGAVPIFVQLLRSPSDDVREQAVWALGNIAGDSPKCRDMVLATNSLIPLLQQLNAESKLTMLRNATWTLSNFCRGKPQPQFDQLRDALPVLARLVHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCRRLVELLSSKHASVLIPALRTVGNIVTGDDYQTQIIINCQALPSLLALLTGDHKKSIKKEACWXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAHAEFDXXXXXXXXXXXXXXXGTHEQISYLVAQGAIKPLCDLIVCSDARIVTVALEGLENILKVGEA-LRADGAP-NQYAQFIDEAEGLEKIENLQNHNNNDIYDKAVKIMEEYFGLEDEEDQNLAPALDASANQFAF-NQPAAPTGGFDFGGMQ 532          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1906.4776.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJF5_ECTSI7.960e-24286.93Importin subunit alpha n=2 Tax=Ectocarpus TaxID=28... [more]
A0A835Z4P4_9STRA2.280e-17872.81Importin subunit alpha n=1 Tax=Tribonema minus Tax... [more]
A0A7S2P4N2_9STRA1.410e-14565.54Importin subunit alpha n=1 Tax=Leptocylindrus dani... [more]
A0A7S0CK65_9STRA5.860e-14466.85Importin subunit alpha n=1 Tax=Proboscia inermis T... [more]
A0A8K1FCP4_PYTOL3.280e-14361.01Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S0X4A9_9CHLO1.650e-14256.51Importin subunit alpha n=1 Tax=Mantoniella antarct... [more]
C1MLU3_MICPC3.230e-14258.11Importin subunit alpha n=1 Tax=Micromonas pusilla ... [more]
A0A830HJH5_9CHLO4.090e-14255.65Importin subunit alpha n=2 Tax=Pycnococcus provaso... [more]
K3X3Z2_GLOUD6.620e-14165.61Importin subunit alpha n=1 Tax=Globisporangium ult... [more]
A0A7S0D3V3_MICPS5.180e-13957.27Importin subunit alpha n=1 Tax=Micromonas pusilla ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1906contigH-paniculata_contig1906:1537..10471 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score715.3
Seed ortholog evalue2.3e-203
Seed eggNOG ortholog2880.D8LJF5
Preferred nameKPNA6
KEGG koko:K15042,ko:K15043
KEGG Pathwayko05164,map05164
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000018,GO:0000166,GO:0000737,GO:0001882,GO:0001883,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005525,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005654,GO:0005730,GO:0005737,GO:0005819,GO:0005829,GO:0005856,GO:0005911,GO:0006139,GO:0006259,GO:0006308,GO:0006309,GO:0006355,GO:0006357,GO:0006605,GO:0006606,GO:0006607,GO:0006612,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006915,GO:0006921,GO:0006950,GO:0006952,GO:0007154,GO:0007165,GO:0007267,GO:0007276,GO:0007283,GO:0007565,GO:0008104,GO:0008139,GO:0008150,GO:0008152,GO:0008219,GO:0008565,GO:0009056,GO:0009057,GO:0009506,GO:0009605,GO:0009607,GO:0009608,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0012501,GO:0012505,GO:0015031,GO:0015630,GO:0015833,GO:0016020,GO:0016021,GO:0016032,GO:0016043,GO:0017038,GO:0017076,GO:0019001,GO:0019048,GO:0019054,GO:0019058,GO:0019219,GO:0019222,GO:0019439,GO:0019953,GO:0022411,GO:0022414,GO:0023052,GO:0030054,GO:0030262,GO:0030312,GO:0030425,GO:0030581,GO:0031144,GO:0031224,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031503,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032501,GO:0032504,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034399,GO:0034504,GO:0034613,GO:0034629,GO:0034641,GO:0034655,GO:0035639,GO:0035821,GO:0036094,GO:0036477,GO:0042277,GO:0042886,GO:0042995,GO:0043005,GO:0043167,GO:0043168,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044003,GO:0044068,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044703,GO:0044706,GO:0044766,GO:0045184,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046700,GO:0046794,GO:0046907,GO:0048232,GO:0048518,GO:0048522,GO:0048609,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051169,GO:0051170,GO:0051171,GO:0051173,GO:0051179,GO:0051233,GO:0051234,GO:0051252,GO:0051254,GO:0051641,GO:0051649,GO:0051701,GO:0051704,GO:0051707,GO:0051708,GO:0051716,GO:0051817,GO:0055044,GO:0060135,GO:0060255,GO:0061608,GO:0065007,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072594,GO:0072657,GO:0072686,GO:0075733,GO:0080034,GO:0080090,GO:0090150,GO:0090304,GO:0090305,GO:0097159,GO:0097194,GO:0097367,GO:0097447,GO:0097458,GO:0098926,GO:0099527,GO:0099536,GO:0120025,GO:0120038,GO:0140104,GO:0140142,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902579,GO:1902581,GO:1902583,GO:1902680,GO:1903506,GO:1903508,GO:1990023,GO:2000112,GO:2001141
EggNOG free text desc.nuclear import signal receptor activity
EggNOG OGsCOG5064@1,KOG0166@2759
Ec32 ortholog descriptionArmadillo-type fold
Ec32 orthologEc-06_010020.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036
Exons10
Model size3910
Cds size1713
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1906.4776.1prot_H-paniculata_contig1906.4776.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1906 3492..10229 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929460.007377-UTR-H-paniculata_contig1906:1536..34911622929460.007377-UTR-H-paniculata_contig1906:1536..3491Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1906 1537..3491 -
1691480871.028246-UTR-H-paniculata_contig1906:1536..34911691480871.028246-UTR-H-paniculata_contig1906:1536..3491Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1906 1537..3491 -
1622929460.1693134-UTR-H-paniculata_contig1906:10229..104711622929460.1693134-UTR-H-paniculata_contig1906:10229..10471Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1906 10230..10471 -
1691480871.1378078-UTR-H-paniculata_contig1906:10229..104711691480871.1378078-UTR-H-paniculata_contig1906:10229..10471Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1906 10230..10471 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929460.0190494-CDS-H-paniculata_contig1906:3491..36651622929460.0190494-CDS-H-paniculata_contig1906:3491..3665Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1906 3492..3665 -
1691480871.0421255-CDS-H-paniculata_contig1906:3491..36651691480871.0421255-CDS-H-paniculata_contig1906:3491..3665Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1906 3492..3665 -
1622929460.036765-CDS-H-paniculata_contig1906:3846..39751622929460.036765-CDS-H-paniculata_contig1906:3846..3975Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1906 3847..3975 -
1691480871.05046-CDS-H-paniculata_contig1906:3846..39751691480871.05046-CDS-H-paniculata_contig1906:3846..3975Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1906 3847..3975 -
1622929460.052729-CDS-H-paniculata_contig1906:4506..46681622929460.052729-CDS-H-paniculata_contig1906:4506..4668Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1906 4507..4668 -
1691480871.062223-CDS-H-paniculata_contig1906:4506..46681691480871.062223-CDS-H-paniculata_contig1906:4506..4668Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1906 4507..4668 -
1622929460.0653439-CDS-H-paniculata_contig1906:4908..51061622929460.0653439-CDS-H-paniculata_contig1906:4908..5106Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1906 4909..5106 -
1691480871.0711622-CDS-H-paniculata_contig1906:4908..51061691480871.0711622-CDS-H-paniculata_contig1906:4908..5106Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1906 4909..5106 -
1622929460.078208-CDS-H-paniculata_contig1906:5268..54571622929460.078208-CDS-H-paniculata_contig1906:5268..5457Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1906 5269..5457 -
1691480871.080585-CDS-H-paniculata_contig1906:5268..54571691480871.080585-CDS-H-paniculata_contig1906:5268..5457Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1906 5269..5457 -
1622929460.09063-CDS-H-paniculata_contig1906:5818..60551622929460.09063-CDS-H-paniculata_contig1906:5818..6055Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1906 5819..6055 -
1691480871.0898378-CDS-H-paniculata_contig1906:5818..60551691480871.0898378-CDS-H-paniculata_contig1906:5818..6055Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1906 5819..6055 -
1622929460.1044366-CDS-H-paniculata_contig1906:6884..71111622929460.1044366-CDS-H-paniculata_contig1906:6884..7111Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1906 6885..7111 -
1691480871.0998282-CDS-H-paniculata_contig1906:6884..71111691480871.0998282-CDS-H-paniculata_contig1906:6884..7111Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1906 6885..7111 -
1622929460.1236002-CDS-H-paniculata_contig1906:7470..75941622929460.1236002-CDS-H-paniculata_contig1906:7470..7594Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1906 7471..7594 -
1691480871.109306-CDS-H-paniculata_contig1906:7470..75941691480871.109306-CDS-H-paniculata_contig1906:7470..7594Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1906 7471..7594 -
1622929460.1354487-CDS-H-paniculata_contig1906:8812..90431622929460.1354487-CDS-H-paniculata_contig1906:8812..9043Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1906 8813..9043 -
1691480871.1195297-CDS-H-paniculata_contig1906:8812..90431691480871.1195297-CDS-H-paniculata_contig1906:8812..9043Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1906 8813..9043 -
1622929460.1517727-CDS-H-paniculata_contig1906:10187..102291622929460.1517727-CDS-H-paniculata_contig1906:10187..10229Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1906 10188..10229 -
1691480871.1300461-CDS-H-paniculata_contig1906:10187..102291691480871.1300461-CDS-H-paniculata_contig1906:10187..10229Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1906 10188..10229 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1906.4776.1

>prot_H-paniculata_contig1906.4776.1 ID=prot_H-paniculata_contig1906.4776.1|Name=mRNA_H-paniculata_contig1906.4776.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=571bp
MMANFVAKDNKESERAKVFKAGVGRDEARRGRNETQVQIRKEKKEERLNQ
RRRKGVGGAGNSLSFGAIPEGGPAASLGPGGSAVDAGTQMRLDQLPQLVI
GVQSLDANTQLETTTSFRKILSIGKSSFTIEQKRNPPIQNVIDAGVVPKF
VEFLQRDDNPALQFESAWALTNIASGTSDHTRVVIEKGAVPIFVRLLMSP
NDDVREQAVWALGNIAGDSPVCRDLVLQQGAMGPLLQQLTDRSKLSMLRN
ATWTLSNFCRGKPQPSFEHVRPALPTLAQLIHSVDEEVLTDACWALSYLS
DGQNDKIQAVIEAGVCQRLVELLIHTSPAVQTPALRTVGNIVTGDDLQTQ
VIINFNALPWLLNLLSSAKKGIRKEACWTISNITAGNKEQIQAVIEANII
PPLIQLLSNAEFDIRKEAAWAISNATSGGKPEQIKYLVQQGCIPPLCDLL
EVHDAKIVTVALEGLENILKVGDTEAKAQGQEMNQMATYIMECGGMERIE
HLQMHDNNNIYNKALKLLERYFGVEDEEDNSIAPTVTGDTPQFSFGTLPQ
PPQGGDGFAAPQPGQGFNFG*
back to top

mRNA from alignment at H-paniculata_contig1906:1537..10471-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1906.4776.1 ID=mRNA_H-paniculata_contig1906.4776.1|Name=mRNA_H-paniculata_contig1906.4776.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8935bp|location=Sequence derived from alignment at H-paniculata_contig1906:1537..10471- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCCCCCATCCCTGGGGTTTTATACATAAATAACGCCGAATTCCTTGGATG ACTGGCAGCACCATCCGCCGCGCCCCGCTAACGTCGTGACGCATTTTCAA CGAGGCTAGACCGTGGTGCTTCGAGTTATCCGCAGCGGTAGCCGCTGCAG AGGTAGATCCGAGCTATCATCAACCGAGAAGCATCAGCGTTGACCTAAAA AGGTCTGCTCGCGATTTTCAACCTTCTCGCTGCTACCGATTTATGATGGC TAACTTCGTCGCGAAGGACAACAAAGAGAGCGAGGTAAGGGTGGGTTGAA CGAGAGGGAAGTAGTAGGAAAGGCTGCTCCCAAGCATTTCTTCTGAGGGG ATAATTACTCTTGTGCTCCACTCAAAACCTTCCAGTGTGTATCCTGCACG TAACCGTGCCCTCAGGCTTGACCTGCGCGATTTATTTCCGTCTTGGGTGG GTGGCAGGCTACCTCCTATTGCTAAAAAACCTCTGTGTTTCATATTGTAT ATTTTCATCTGGTTTGTATTTTTTCCCTTTAGTGTTCGTGTCGAGTCTAT GTCTCATCGTCGTCTCGAAGCAATCGCGGCGAAGGTTGATCAAGCCTCAC CATTAGTGTCGGATGTGGTGGTTTATCGTCCACGTAAAAAATGTTATCAG CTCGTAGACCGGGATATTTTCACCCGGAAACATTTGATATTGAACCTTTG GAACGATGAGTTTGAAAAAAACAAATGCCGTAACTTGATCATGGAGTGGA ATAATACGGTCACTACAGTCAGTCTTCACAGTCACAAGATTTTATATAAA AATTGGCATGTGCCCCATAGCCCCCTGGGTGTTGAGCTGTAGTAAGCTAC CGCTACCCACAACCACTTCATTGGGCATCCCATGCTGTAGTCGCAGGTCG TCTATAACCTTCTTTGTCGTGTACCACATGTGAAGATTACGCACATAGCG TGCTGACTTTACTCGGGGTGGAAGAAAGTTGGAAAATAGTTCTCAAGAGG CTCCGGCCTCGTCCTCTTGCTTCCTTTGTTTCTGCATCGAGCATTTCACC TAACCGAGATCTGCCACAAGATGTAGTCCCATGTTTCGTTGGCCCCCACT TGCTTACGCACGGGTCGATGCTATACATCGGATTTCAAGTGAACTTTCTC CTTGCCCCACTCGGGACAGTCTGTGCTATTTGCGATCACCATACAATTTT CTGAAATCGTTTCTGTCTGTTGGATGTTTCCATTGGGTTGCACACAGAGA AGCCAGGCAGCAAGTGTTCTGGTACACCGCAAGTCAACAGGTGTACATAA CCTTGACAGATGCAGCTACACGAGCGGGACTGTCTCCATCCACACAACCT TGTCTAACCAAAACACGTGGAAAATTGCTGTATTCCCTGTACCGTACCAA CCCTGTCCCACATCAATGAAAATTGTAGCGGGCTAAGGTATTCAAGGCCG GAGTTGGGCGCGATGAAGCCAGGCGAGGTCGCAATGAAACCCAGGTCCAA ATCCGAAAAGAAAAGAAGGAGGAGAGGCTCAATCAGCGCCGGCGCAAGGG GGTGGGTGGGGCGGGCAACTCTTTGAGTTTCGGCGCAATTCCCGAAGGCG GCCCGGCAGCTTCATTGGGCCCTGGAGGATCTGCAGTTGATGCCGGAACG CAGATGCGGGTAATGAATGGACTTGACCTACCTAGTCTACAGTACTATTA AAACGTGAAGCCACTGAAAGTGTGTATTTTTCTCCTTCTTGAGCGTCTCC GTCATTTGTGTTCTAATCAATTGCTTAGGAGTCTTGTGGACGTTTGTTCA TGCAGCGATCATGGACATATTGTAGCCCTTATTTTACCACATCCTTCTCT GCTTCGCCACTTGCCCTTCAAGTAGCCTCGAAGCCTAAAGCTGTCCTCCC ACCTGTAGTGTGTGGATTGTCATTATTGTTGCACCATCATCCCGAACGAA CTGCTTCATGATTCTTTTGTCATTCGTATCGCACTGTTGCCGCTTCCATC AATGAGAATTAATGTTCCGTGCGCACGCACTGTACTTGGATTGTTTCGGT CAAGTATTTCTGTTCGGAAATATGACAGCCTTGGGTGTTCGTGCTGACTT TTCAAAGTGTGATGCCAGTACACTTTACTGCCTCTGTCGAAAAAATGTCA GAATGGTGGTTTCCGATCGAAGTTGGATTGATGCATCCGGAGGTTGACTT ATGGGGCATTTTTGGAATAACACGAGAACTATCGGAAGCATCATTCGATG CCGTCGGAAGTCTGGTCGAAGTTTTCAGTGGCACTTACGCTGGCGGGGCT GAATTTTTTACCGATCATATCCTCACCTGTCCAAGTATTTTTACCTGGCT GGTCTCATGTTTTCTGGTTGGTTCTCCATGATTCGATCGATTGCCAGGAC TTGCGCTGAAATATGTCTGGTTGTGAAACTTGATGTTGGTTGAATATGTA AGGACTCTTTGTTTTATAAATGGTAGGATTGCGCTATTAGATTGTCATGT AATGTGATGCAATCCTATCCTATTTGACGTGGGCGACGTTTTGGTAAAGT CGACATGCGATCTGGATCTGGAAATGAATGATCAAGTTTATAATACAGCG TACATGAATACACGCGATACTGACCTCGTGAGCTTTTTATATTGCGAGTG TGCAAGCAGGCCTATCCAGACTTGATGTTGACTAAACCTTGAATTCTGCG CAGTCTTCAGCTTTTGTCAACCTTGTCCGTAGATGCGTGTCGTGCAAGCC TCCCTCATCCTTGTTTCGCTTCCTTTCAGGAAGCTCGACAGCTGCCATGA AATGTTTCATAAATTACCTACCCTCCCATGCTTTACGGCTGTGTGCCATA CCGCTCTCTGTGACATAACGTGCGCAGCTTGACCAGCTGCCTCAACTGGT GATTGGAGTCCAAAGCCTTGACGCCAACACTCAGCTCGAAACGACAACCT CCTTCCGGAAAATCCTCTCAATAGGCAAGTCCTCATTCACAATCGAGCAA AGTTCCAACTCGAGCAGTACCGTTGCAATGAGATGCCGTAATTTGCACCT AGGCACGAAGTTATCGGCGTCAAATAGACGATTAGAGCGCAGAGCATGTA ATGCTTCAAATTAACAAGACTGCTCTTGCCCGTTAGCCGAGAAAACCCGG TTTTGACTGCTAGAAGCAGCGTCCACCTTGAATACATTGTCTCCAAAAGT CCCCGGTGCAAATGCATTACGAAGTTCAACCCTAGTCTCTACTAGGGAGG CATTCCCAATTTTGTGGAACCCATGATTATCGTCATTTTCCTAAACATTC CTCCCTGTTACATCCCCTGTCCCGCTGCTGCTGCTGCTGCCGTTGCTCCT GCTGTAACAGAACGCAATCCGCCCATTCAAAATGTGATAGATGCTGGAGT GGTGCCCAAGTTTGTTGAGTTCCTCCAGCGAGATGACAACCCGGCCCTGC AGTTTGAGTCGGCGTGGGCACTAACCAACATCGCCAGCGGAACGAGCGAC CACACTCGGGTGGTGATAGAGAAAGGAGCCGTGCCCATCTTCGTGCGTCT GCTCATGAGCCCCAATGATGATGTCCGCGAACAGGCTGTAAGTTATTTCA TGTACGATTTTGATCGCGTTTGACGGTGTAGCATTCGATTCCAATTTTGC TCTTTTGAAGTTTATAATTTTCATGGTATCGAGGTTCAGGTGGCGACAAC ACCCTGACGTCGCTAATGAAGGTAGCAGGAACCAATGCCTGAGCTTCGCC TTCGACAAAAGAAGAAGAGTATATGTCTGTATGACGGCAAAAAATCCCGT ATTGGATATAAACGTCGTGGATCTTGTAGACAGATTTGATTTCGATAGGT CTCGAGATGATGTGACGAGGAGATATTCATGTAAAAAAAGAAACAGTTGA CAATTCTACCCGAAACGATGTGTGTTCATGATGTTGAAAAATGGGAATTC GTCGTTGTATTGATATTTAATGTGTACACGAGTGACACCGTCGTAATCTT CGTAATTTTCTTGGTATCTTAATTTTGTTTTTGTAGTCAGTCGAAAATGC CTCCCTAATCCTTCCTTTGAGTGTCTAGTAGGCCAACCTGATGAACTTGA ACCAATGCCGAATAGTATCGCTGATATATCCTAACTCAACTTGGTGCTGT ATCAATCGGGGCTATCCTGTGTACCGGCAGTAACATCAACAGTTTTCTCA ACCTTGAAACAGGTTTGAAACAAAGTGTGGTGGACAAATACCGTTCTCGT GATCCCAAGCCTGCGTGGTGCAAAAACAGGCTTGAACATTAATCCCACTG GTGAACTATCTACTAAGCAAGGAACATAGCAGTCTGGTTGATGACTTCAT TCCCAGTCCGCGTCTATAATCTTTTTCTATCGTCACTGTTTGTATGAACA CCTCCGTTGGAAACAGGTCTGGGCTCTGGGAAACATCGCGGGCGACTCCC CCGTGTGCCGCGACCTCGTTCTTCAGCAGGGGGCGATGGGCCCACTGTTG CAGCAGCTGACTGACCGATCTAAGCTTTCCATGCTGCGAAACGCCACCTG GACTCTTTCGAACTTCTGCAGGGGAAAGCCGCAGCCCAGTTTCGAACACG TCCGTCCCGCCCTGCCTACGCTGGCGCAGCTTATTCACTCCGTCGACGAG GAGGTGCGTTACGGTTATATTGAAGGATCATTCTGACGTGCCATATACAA TTGTAGACTGAACTTGGTGTCATGGCGGAATCGCATTCATGTAAACGCTC AGTCACTTGGTCCAGGTCTCCTGAAACATGGAAAAAGGTGGTCGTGCTGA ACATTCTCTCGCAACGTCCTCATACGGTAATTTCTAGCTGTTGAAGTTTC GACGGCATTTTGCCCGCGCTACTCATGGGCGAAATTCGTGGCAGGTGCAC AACATTTTTTCGTGCGTCATGCTGCTCTATCGTGTAGTTCTTGGTTATTT TTCACATCGCCGCCTCTGATGTTATGTCTTCGTTGCCGCTTTCGCACTTG TCAAATTGATGTAGGTGTTGACCGACGCGTGCTGGGCCCTGAGCTACCTA TCAGATGGGCAAAACGACAAAATTCAGGCTGTGATCGAAGCGGGCGTGTG CCAGCGTTTGGTGGAACTTCTGATCCACACTTCTCCGGCTGTGCAGACGC CGGCGTTGCGCACGGTGGGCAACATTGTTACGGGCGATGATCTTCAGACC CAGGTTTGTGCCCGGAGATTCTTCACCGTCTGGATTCTTACGTGCAGGCA ATCATGCTCTGATGTGTATCTTTTCATGTAGTCACTCAACACTTGCGCTC GTGACATTTGAGGCATTCCTCACTCGATTTGGAATGCCCTGGTCCCTTAC CTCTCAACGCGTCAGGTGATCATCAACTTCAATGCGTTGCCGTGGCTGCT GAACCTCCTGAGCTCGGCGAAGAAAGGCATCCGGAAGGAGGCGTGTTGGA CCATCTCGAACATCACCGCGGGAAACAAGGAGCAGATCCAGGCGGTCATT GAGGCCAACATTATCCCTCCCCTCATCCAGCTGCTCTCCAACGCTGAGTT CGATATCCGAAAGGTGAGGTTAACATTTGAGATAATGTGCCTTGATGCAC TAGGAGTGATCGCGTGGAACACGATGGAGACCATGAAGAATATGGTGGTC TACGGTAATTTTGGGTCATCTCTCGTATCCACACTAACTTGCTTACACGG GGCGCTGTAGTCGCATCCGCTCGGTTTTTTTCTTGATTGCTTCATGTAAC ATCATGAAACCTTTTCAAATCGATTAGCGAATCTGTGTGTTGGCTACTCA CAGGAAGCCGCGTGGGCGATTTCGAACGCCACAAGCGGCGGTAAGCCGGA GCAGATCAAGTACCTCGTGCAGCAGGGATGCATCCCTCCCCTCTGCGACC TTTTGGAGGTGCACGACGCCAAGATTGTGACAGTCGCTCTGGAGGGACTC GAGAACATCCTCAAGGTAAAAGAGTCGCTTTCCGCACGAACTTGACTAAA TCGTTCTTCAGGTATACCTTTTGCGGAAATGGGCCATGAACGGTGTCGTG TGCTCTGGTTGTACTTGTAGGGTGATGTGTTCGTGCTCTTTCGCGTGAAA GGTTTATGACTTTGGTTGCTGGGAAACCTCCGCTGATATAGCAATATTCA TCGAGTGAACTGCGATGGCTATGATTAAACTTGAGAAGAGGATGACGGAG GAGTCATTTGAAAGTAAGTGTCGACTTCTACAGCGTCCACCTTCATCTGT GTAAGACCTTGTTTTATTGAGGACTTGCCCACATCTTCTCGGGCATCACC TGGTGAACTCGTTAGCAACCGCGGTTCTGCTTACTACGTTCCCCGAAGAT TCGCATTTCCTATTTGTTGGCTGGAGAAACATTCTAGTGTACTCGCATGC ATGCCATAAAATATGGTGGTGTGTCTTGAATCGAACTGAGGTAGTGTTCA GTGAATTAAAATAAATAAATAAATGAAGCCATGGGGTTTTGATCAGGTGG GCGACACTGAGGCGAAGGCTCAAGGGCAAGAGATGAACCAGATGGCAACG TACATCATGGAATGTGGAGGGATGGAGCGGATCGAGCACCTCCAGATGCA CGACAACAACAACATTTACAACAAGGTGTGTATCTTTTACCCAGTCGAGA TGTTCCCTGTCGTAATTCGTGCAAACTCAGCCGGAGGGTACACACAATCC TTGTCTTGAAACAAGTGAGCACATGGTATGCTAGGTAATGTAGTCACGTT GAACCAACTCTGGTACCCTCATGTTGTGTTGCGCCTTCGTGCAAACAATC TTGCAGGCGCTCAAGCTCTTGGAGAGGTACTTTGGGGTCGAGGATGAGGA GGACAACAGTATCGCGCCGACGGTGACCGGAGACACGCCACAGTTCTCAT TTGGCACGTTGCCGCAACCGCCACAGGGAGGTGACGGATTCGCTGCGCCG CAGCCTGGACAAGGTTTCAACTTCGGATAAACCTTCAACGCGTTTTATTA AAGCGGTCACGGCCGCAAGTTCCCAAGGTGCATTTAAGCTGCCGGGTTCC GAGTAACATTTAGGTTGAGGATTATCTGTAGATTAGGGTTTGTAGATTCT AGACTGTGTGAAAGTCTCGAACAATTTATTCCACGTTGATTCGTGAAATT TGATATATTCTAGTTGTAGTTTAAGGTTCCCTCAGGGTCTCAACGTCCGC ATGCTTTGACTTCCGTTGTAGTTCTTGTCGGGTTACGAGATGGATTCTCG GTGTAAGTAATTTTGTGAGTTGTCAAGCCTTCTGAACCCCCCAGTGTGCC TCCCCTTAACCTGTATTGTCGTTTGTCCCATGTAGGCTTGCGGACGTGTA TGAGCAGCTCGAAAAGAGGCACCCCCCACGCCTCTCCCTCCGCTGCGCGG TTGGCCAAGAGAAGCGGAACTGTTTTTCAAGACCCCCCCAAGTCTTCAGC TACCCGTGCTTTGTATTTTGGCAAACCCCTGCGTTGTCGTTCCCCTACCC CAAGTGGGGGAGGTACGATAGCTGAAAATGTAGCCCCTAGACCCCCCGGT CCCCAAAACGTGGGGGATAGGCGCTACACTCCCCTGCTGGTGATCTCCAA CCCTGTGCCAGCATCCCAGCCCTGAGCCCCCTCATTGAGTGCCTCCCCAA GGCCAGTGATGAGACCCCGTACTCGGTAAGGCCCTTCATCGCCATCGCAC TGCTAACCTAATGTTAATCATTGGGTTTGTGACGCTGTGCGAGTGACAGG CAGGGCCTCCCGAGGCGTCGAAGGCCTCGCTGCCAGTTTTTTTCGCTTCC CGCCTCGGCGGCGGCGGGACGAGCAGATCAGCTGGAGAATCGGAGGAAGC AAGCTCCGGGAGAGGGAAAAGTGAAGTCGTTACATAGGGCCACGACCCCC TTTCCCTCCCTTCCCCCCGTCTCCCCTCTTGAACCGTGGCCGTGAAGCAG AGGCCGACCAAAGTGGGGGACGATTATCACATTTGCGGCATAATCTTGTT GTGCGATAAATAGTGTTGAGATTGTGAGTAAATTGTGCTTCTCCGCGAGG CTGAATTTGCGAGCCGCCCGCCAGGTTGTAGAGCTTGGGTGGTTTTGATG TTGACCCGCGTTGGACGGCAGTTGAACATAACCGTGCTCTACCGCCCTTC CCCCTCTCGCTGGCTACGGCGAGATCCCCTACCCTGACCCTAACCTTCCC CCTCCCCCCCCCCAACCCCCCGACCCCTAACCCCTTTCCCCCATCCGTCT CCCCGGCGGATATGAGCGCGCGCGATCGGCATTGAAATGATTGGTTGAAA TGAGTGTGGAAGTGGGTGATGCATGAACTTGAGGGCAACAGTGAAACCTT AGCTGGGCTGAGACAGTTGCCTTATAGTGCATACCCTGTGTAGCTGATGT TTTGGTGCAGAATGATTGAATGAATGAATGATGGGGCGGGAAGAAAGCTG AAATACGATATTTCAACTTGATGCCCTTTTGTCCTCTAGATGCTGTCACT GTTGAAGTCTTTGCTGGTAATTTTGGGAATGTGGAAGCTGTTGACAGCTA GGCGCAGGATTATCATAGGTCGTTTTTACAGGGAACACCTAGTTCGGTCG TGTTTTCATCGTCCGAAGAATTGTGAGCAAAGTGGGAGTGGGCGAAAGGA TTGTTGCGTCTTGCCTTTTGAGGAAGTGCTGACGAGGTGAACGCAGTAGA GATATAAATTTCCACACAGCCGTGAATGAATATACATATTTTTTTGTGTT TCATGGATCTCGCCTCTTGTGTGCTCGTTTTCGGACGGCTCATCTTGGAG CGTCAGGGAAACGATCCTCCCAGAGCAGTAATTATTATACATGTGATGCG CACCGGTTCTTCCTACTCGTACTGCACGCCTGGCATCAACAAGTAAGGCT GCGAGTGTTTGCGTCGAACGATGCGTTCAACAGCA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig1906:1537..10471-

>mRNA_H-paniculata_contig1906.4776.1 ID=mRNA_H-paniculata_contig1906.4776.1|Name=mRNA_H-paniculata_contig1906.4776.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3426bp|location=Sequence derived from alignment at H-paniculata_contig1906:1537..10471- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATGGCTAACTTCGTCGCGAAGGACAACAAAGAGAGCGAGATGATGGC
TAACTTCGTCGCGAAGGACAACAAAGAGAGCGAGCGGGCTAAGGTATTCA
AGGCCGGAGTTGGGCGCGATGAAGCCAGGCGAGGTCGCAATGAAACCCAG
GTCCAAATCCGAAAAGAAAAGAAGGAGGAGAGGCTCAATCAGCGCCGGCG
CAAGGGGGTGGGTGGGGCGGGCAACTCTTTGAGTTTCGGCGCAATTCCCG
AAGGCGGCCCGGCAGCTTCATTGGGCCCTGGAGGATCTGCAGTTGATGCC
GGAACGCAGATGCGGCGGGCTAAGGTATTCAAGGCCGGAGTTGGGCGCGA
TGAAGCCAGGCGAGGTCGCAATGAAACCCAGGTCCAAATCCGAAAAGAAA
AGAAGGAGGAGAGGCTCAATCAGCGCCGGCGCAAGGGGGTGGGTGGGGCG
GGCAACTCTTTGAGTTTCGGCGCAATTCCCGAAGGCGGCCCGGCAGCTTC
ATTGGGCCCTGGAGGATCTGCAGTTGATGCCGGAACGCAGATGCGGCTTG
ACCAGCTGCCTCAACTGGTGATTGGAGTCCAAAGCCTTGACGCCAACACT
CAGCTCGAAACGACAACCTCCTTCCGGAAAATCCTCTCAATAGGCAAGTC
CTCATTCACAATCGAGCAAACTTGACCAGCTGCCTCAACTGGTGATTGGA
GTCCAAAGCCTTGACGCCAACACTCAGCTCGAAACGACAACCTCCTTCCG
GAAAATCCTCTCAATAGGCAAGTCCTCATTCACAATCGAGCAAAAACGCA
ATCCGCCCATTCAAAATGTGATAGATGCTGGAGTGGTGCCCAAGTTTGTT
GAGTTCCTCCAGCGAGATGACAACCCGGCCCTGCAGTTTGAGTCGGCGTG
GGCACTAACCAACATCGCCAGCGGAACGAGCGACCACACTCGGGTGGTGA
TAGAGAAAGGAGCCGTGCCCATCTTCGTGCGTCTGCTCATGAGCCCCAAT
GATGATGTCCGCGAACAGGCTAACGCAATCCGCCCATTCAAAATGTGATA
GATGCTGGAGTGGTGCCCAAGTTTGTTGAGTTCCTCCAGCGAGATGACAA
CCCGGCCCTGCAGTTTGAGTCGGCGTGGGCACTAACCAACATCGCCAGCG
GAACGAGCGACCACACTCGGGTGGTGATAGAGAAAGGAGCCGTGCCCATC
TTCGTGCGTCTGCTCATGAGCCCCAATGATGATGTCCGCGAACAGGCTGT
CTGGGCTCTGGGAAACATCGCGGGCGACTCCCCCGTGTGCCGCGACCTCG
TTCTTCAGCAGGGGGCGATGGGCCCACTGTTGCAGCAGCTGACTGACCGA
TCTAAGCTTTCCATGCTGCGAAACGCCACCTGGACTCTTTCGAACTTCTG
CAGGGGAAAGCCGCAGCCCAGTTTCGAACACGTCCGTCCCGCCCTGCCTA
CGCTGGCGCAGCTTATTCACTCCGTCGACGAGGAGGTCTGGGCTCTGGGA
AACATCGCGGGCGACTCCCCCGTGTGCCGCGACCTCGTTCTTCAGCAGGG
GGCGATGGGCCCACTGTTGCAGCAGCTGACTGACCGATCTAAGCTTTCCA
TGCTGCGAAACGCCACCTGGACTCTTTCGAACTTCTGCAGGGGAAAGCCG
CAGCCCAGTTTCGAACACGTCCGTCCCGCCCTGCCTACGCTGGCGCAGCT
TATTCACTCCGTCGACGAGGAGGTGTTGACCGACGCGTGCTGGGCCCTGA
GCTACCTATCAGATGGGCAAAACGACAAAATTCAGGCTGTGATCGAAGCG
GGCGTGTGCCAGCGTTTGGTGGAACTTCTGATCCACACTTCTCCGGCTGT
GCAGACGCCGGCGTTGCGCACGGTGGGCAACATTGTTACGGGCGATGATC
TTCAGACCCAGGTGTTGACCGACGCGTGCTGGGCCCTGAGCTACCTATCA
GATGGGCAAAACGACAAAATTCAGGCTGTGATCGAAGCGGGCGTGTGCCA
GCGTTTGGTGGAACTTCTGATCCACACTTCTCCGGCTGTGCAGACGCCGG
CGTTGCGCACGGTGGGCAACATTGTTACGGGCGATGATCTTCAGACCCAG
GTGATCATCAACTTCAATGCGTTGCCGTGGCTGCTGAACCTCCTGAGCTC
GGCGAAGAAAGGCATCCGGAAGGAGGCGTGTTGGACCATCTCGAACATCA
CCGCGGGAAACAAGGAGCAGATCCAGGCGGTCATTGAGGCCAACATTATC
CCTCCCCTCATCCAGCTGCTCTCCAACGCTGAGTTCGATATCCGAAAGGT
GATCATCAACTTCAATGCGTTGCCGTGGCTGCTGAACCTCCTGAGCTCGG
CGAAGAAAGGCATCCGGAAGGAGGCGTGTTGGACCATCTCGAACATCACC
GCGGGAAACAAGGAGCAGATCCAGGCGGTCATTGAGGCCAACATTATCCC
TCCCCTCATCCAGCTGCTCTCCAACGCTGAGTTCGATATCCGAAAGGAAG
CCGCGTGGGCGATTTCGAACGCCACAAGCGGCGGTAAGCCGGAGCAGATC
AAGTACCTCGTGCAGCAGGGATGCATCCCTCCCCTCTGCGACCTTTTGGA
GGTGCACGACGCCAAGATTGTGACAGTCGCTCTGGAGGGACTCGAGAACA
TCCTCAAGGAAGCCGCGTGGGCGATTTCGAACGCCACAAGCGGCGGTAAG
CCGGAGCAGATCAAGTACCTCGTGCAGCAGGGATGCATCCCTCCCCTCTG
CGACCTTTTGGAGGTGCACGACGCCAAGATTGTGACAGTCGCTCTGGAGG
GACTCGAGAACATCCTCAAGGTGGGCGACACTGAGGCGAAGGCTCAAGGG
CAAGAGATGAACCAGATGGCAACGTACATCATGGAATGTGGAGGGATGGA
GCGGATCGAGCACCTCCAGATGCACGACAACAACAACATTTACAACAAGG
TGGGCGACACTGAGGCGAAGGCTCAAGGGCAAGAGATGAACCAGATGGCA
ACGTACATCATGGAATGTGGAGGGATGGAGCGGATCGAGCACCTCCAGAT
GCACGACAACAACAACATTTACAACAAGGCGCTCAAGCTCTTGGAGAGGT
ACTTTGGGGTCGAGGATGAGGAGGACAACAGTATCGCGCCGACGGTGACC
GGAGACACGCCACAGTTCTCATTTGGCACGTTGCCGCAACCGCCACAGGG
AGGTGACGGATTCGCTGCGCCGCAGCCTGGACAAGGTTTCAACTTCGGAT
AAGCGCTCAAGCTCTTGGAGAGGTACTTTGGGGTCGAGGATGAGGAGGAC
AACAGTATCGCGCCGACGGTGACCGGAGACACGCCACAGTTCTCATTTGG
CACGTTGCCGCAACCGCCACAGGGAGGTGACGGATTCGCTGCGCCGCAGC
CTGGACAAGGTTTCAACTTCGGATAA
back to top