prot_H-paniculata_contig19050.4775.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig19050.4775.1
Unique Name	prot_H-paniculata_contig19050.4775.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	62

Homology

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BLAST of mRNA_H-paniculata_contig19050.4775.1 vs. uniprot
Match: A0A6S4QRE4_9PHAE (Photosystem I P700 apoprotein A1 (Fragment) n=3 Tax=Ochrophyta TaxID=2696291 RepID=A0A6S4QRE4_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 1.490e-26
Identity = 55/62 (88.71%), Postives = 57/62 (91.94%), Query Frame = 0

Query:    1 HLLAPPSRAPTALTTASYVFGGDVVSIGSKIAIMPINLSTGDFMVHHIHAFTLHVTVLILLK 62
            HLLAP S AP ALTTASYVFGGD+VSIGSKIAIMPI LST DFMVHHIHAFT+HVTVLILLK
Sbjct:  434 HLLAPSSTAPNALTTASYVFGGDIVSIGSKIAIMPIKLSTADFMVHHIHAFTIHVTVLILLK 495

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BLAST of mRNA_H-paniculata_contig19050.4775.1 vs. uniprot
Match: A0ELG5_9PHAE (Photosystem I P700 Chl a apoprotein A1 (Fragment) n=5 Tax=Phaeophyceae TaxID=2870 RepID=A0ELG5_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 1.950e-26
Identity = 55/62 (88.71%), Postives = 57/62 (91.94%), Query Frame = 0

Query:    1 HLLAPPSRAPTALTTASYVFGGDVVSIGSKIAIMPINLSTGDFMVHHIHAFTLHVTVLILLK 62
            HLLAP S AP ALTTASYVFGGD+VSIGSKIAIMPI LST DFMVHHIHAFT+HVTVLILLK
Sbjct:  431 HLLAPGSTAPNALTTASYVFGGDIVSIGSKIAIMPIKLSTADFMVHHIHAFTIHVTVLILLK 492

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BLAST of mRNA_H-paniculata_contig19050.4775.1 vs. uniprot
Match: A1L0R0_9PHAE (Photosystem I P700 apoprotein A1 (Fragment) n=7 Tax=Ectocarpales TaxID=2877 RepID=A1L0R0_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 1.950e-26
Identity = 55/62 (88.71%), Postives = 57/62 (91.94%), Query Frame = 0

Query:    1 HLLAPPSRAPTALTTASYVFGGDVVSIGSKIAIMPINLSTGDFMVHHIHAFTLHVTVLILLK 62
            HLLAP S AP ALTTASYVFGGD+VSIGSKIAIMPI LST DFMVHHIHAFT+HVTVLILLK
Sbjct:  431 HLLAPGSTAPNALTTASYVFGGDIVSIGSKIAIMPIKLSTADFMVHHIHAFTIHVTVLILLK 492

[Close]

BLAST of mRNA_H-paniculata_contig19050.4775.1 vs. uniprot
Match: A0ELH4_9PHAE (Photosystem I P700 Chl a apoprotein A1 (Fragment) n=1 Tax=Petalonia zosterifolia TaxID=87241 RepID=A0ELH4_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 1.950e-26
Identity = 55/62 (88.71%), Postives = 57/62 (91.94%), Query Frame = 0

Query:    1 HLLAPPSRAPTALTTASYVFGGDVVSIGSKIAIMPINLSTGDFMVHHIHAFTLHVTVLILLK 62
            HLLAP S AP ALTTASYVFGGD+VSIGSKIAIMPI LST DFMVHHIHAFT+HVTVLILLK
Sbjct:  431 HLLAPGSTAPNALTTASYVFGGDIVSIGSKIAIMPIKLSTADFMVHHIHAFTIHVTVLILLK 492

[Close]

BLAST of mRNA_H-paniculata_contig19050.4775.1 vs. uniprot
Match: B6CWP9_9PHAE (PSI P700 chlorophyll a apoprotein A1 (Fragment) n=1 Tax=Heribaudiella fluviatilis TaxID=246117 RepID=B6CWP9_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 1.950e-26
Identity = 55/62 (88.71%), Postives = 57/62 (91.94%), Query Frame = 0

Query:    1 HLLAPPSRAPTALTTASYVFGGDVVSIGSKIAIMPINLSTGDFMVHHIHAFTLHVTVLILLK 62
            HLLAP S AP ALTTASYVFGGD+VSIGSKIAIMPI LST DFMVHHIHAFT+HVTVLILLK
Sbjct:  431 HLLAPGSTAPNALTTASYVFGGDIVSIGSKIAIMPIKLSTADFMVHHIHAFTIHVTVLILLK 492

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BLAST of mRNA_H-paniculata_contig19050.4775.1 vs. uniprot
Match: U3SYE4_9PHAE (Photosystem I P700 chlorophyll a apoprotein A1 (Fragment) n=103 Tax=Phaeophyceae TaxID=2870 RepID=U3SYE4_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 2.230e-26
Identity = 55/62 (88.71%), Postives = 57/62 (91.94%), Query Frame = 0

Query:    1 HLLAPPSRAPTALTTASYVFGGDVVSIGSKIAIMPINLSTGDFMVHHIHAFTLHVTVLILLK 62
            HLLAP S AP ALTTASYVFGGD+VSIGSKIAIMPI LST DFMVHHIHAFT+HVTVLILLK
Sbjct:  446 HLLAPSSTAPNALTTASYVFGGDIVSIGSKIAIMPIKLSTADFMVHHIHAFTIHVTVLILLK 507

[Close]

BLAST of mRNA_H-paniculata_contig19050.4775.1 vs. uniprot
Match: A0A8E4UPV3_9PHAE (Photosystem I P700 Chl a apoprotein A1 (Fragment) n=1 Tax=Colpomenia sinuosa TaxID=87236 RepID=A0A8E4UPV3_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 2.350e-26
Identity = 54/62 (87.10%), Postives = 57/62 (91.94%), Query Frame = 0

Query:    1 HLLAPPSRAPTALTTASYVFGGDVVSIGSKIAIMPINLSTGDFMVHHIHAFTLHVTVLILLK 62
            HLLAP S AP ALTTASYVFGGD+VS+GSKIAIMPI LST DFMVHHIHAFT+HVTVLILLK
Sbjct:  396 HLLAPGSTAPNALTTASYVFGGDIVSVGSKIAIMPIKLSTADFMVHHIHAFTIHVTVLILLK 457

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BLAST of mRNA_H-paniculata_contig19050.4775.1 vs. uniprot
Match: D1H064_9PHAE (Photosystem I core protein A (Fragment) n=4 Tax=Ectocarpus TaxID=2879 RepID=D1H064_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 2.690e-26
Identity = 54/62 (87.10%), Postives = 57/62 (91.94%), Query Frame = 0

Query:    1 HLLAPPSRAPTALTTASYVFGGDVVSIGSKIAIMPINLSTGDFMVHHIHAFTLHVTVLILLK 62
            HLLAP S AP ALTTASYVFGGD+VS+GSKIAIMPI LST DFMVHHIHAFT+HVTVLILLK
Sbjct:  431 HLLAPGSTAPNALTTASYVFGGDIVSVGSKIAIMPIKLSTADFMVHHIHAFTIHVTVLILLK 492

[Close]

BLAST of mRNA_H-paniculata_contig19050.4775.1 vs. uniprot
Match: Q5VK95_9PHAE (Photosystem I P700 Chl a apoprotein A1 (Fragment) n=16 Tax=Phaeophyceae TaxID=2870 RepID=Q5VK95_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 2.690e-26
Identity = 54/62 (87.10%), Postives = 57/62 (91.94%), Query Frame = 0

Query:    1 HLLAPPSRAPTALTTASYVFGGDVVSIGSKIAIMPINLSTGDFMVHHIHAFTLHVTVLILLK 62
            HLLAP S AP ALTTASYVFGGD+VS+GSKIAIMPI LST DFMVHHIHAFT+HVTVLILLK
Sbjct:  431 HLLAPGSTAPNALTTASYVFGGDIVSVGSKIAIMPIKLSTADFMVHHIHAFTIHVTVLILLK 492

[Close]

BLAST of mRNA_H-paniculata_contig19050.4775.1 vs. uniprot
Match: A0A2U9IYZ8_9PHAE (Photosystem I P700 Chl a apoprotein A1 (Fragment) n=1 Tax=Tronoella ryukyuana TaxID=2203893 RepID=A0A2U9IYZ8_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 2.690e-26
Identity = 54/62 (87.10%), Postives = 57/62 (91.94%), Query Frame = 0

Query:    1 HLLAPPSRAPTALTTASYVFGGDVVSIGSKIAIMPINLSTGDFMVHHIHAFTLHVTVLILLK 62
            HLLAP S AP ALTTASYVFGGD+VS+GSKIAIMPI LST DFMVHHIHAFT+HVTVLILLK
Sbjct:  431 HLLAPGSTAPNALTTASYVFGGDIVSVGSKIAIMPIKLSTADFMVHHIHAFTIHVTVLILLK 492

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig19050.4775.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig19050.4775.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6S4QRE4_9PHAE	1.490e-26	88.71	Photosystem I P700 apoprotein A1 (Fragment) n=3 Ta...	[more]
A0ELG5_9PHAE	1.950e-26	88.71	Photosystem I P700 Chl a apoprotein A1 (Fragment) ...	[more]
A1L0R0_9PHAE	1.950e-26	88.71	Photosystem I P700 apoprotein A1 (Fragment) n=7 Ta...	[more]
A0ELH4_9PHAE	1.950e-26	88.71	Photosystem I P700 Chl a apoprotein A1 (Fragment) ...	[more]
B6CWP9_9PHAE	1.950e-26	88.71	PSI P700 chlorophyll a apoprotein A1 (Fragment) n=...	[more]
U3SYE4_9PHAE	2.230e-26	88.71	Photosystem I P700 chlorophyll a apoprotein A1 (Fr...	[more]
A0A8E4UPV3_9PHAE	2.350e-26	87.10	Photosystem I P700 Chl a apoprotein A1 (Fragment) ...	[more]
D1H064_9PHAE	2.690e-26	87.10	Photosystem I core protein A (Fragment) n=4 Tax=Ec...	[more]
Q5VK95_9PHAE	2.690e-26	87.10	Photosystem I P700 Chl a apoprotein A1 (Fragment) ...	[more]
A0A2U9IYZ8_9PHAE	2.690e-26	87.10	Photosystem I P700 Chl a apoprotein A1 (Fragment) ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036408	Photosystem I PsaA/PsaB superfamily	GENE3D	1.20.1130.10		coord: 1..62 e-value: 2.2E-17 score: 64.1
IPR036408	Photosystem I PsaA/PsaB superfamily	SUPERFAMILY	81558	Photosystem I subunits PsaA/PsaB	coord: 12..62
IPR001280	Photosystem I PsaA/PsaB	PFAM	PF00223	PsaA_PsaB	coord: 4..62 e-value: 2.2E-16 score: 59.3
None	No IPR available	PANTHER	PTHR30128	OUTER MEMBRANE PROTEIN, OMPA-RELATED	coord: 1..62
None	No IPR available	PANTHER	PTHR30128:SF49	PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A1	coord: 1..62
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 62..62
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..42
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 43..61

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig19050	contig	H-paniculata_contig19050:4..189 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig19050.4775.1	mRNA_H-paniculata_contig19050.4775.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig19050 4..190 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig19050.4775.1 ID=prot_H-paniculata_contig19050.4775.1|Name=mRNA_H-paniculata_contig19050.4775.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=62bp
HLLAPPSRAPTALTTASYVFGGDVVSIGSKIAIMPINLSTGDFMVHHIHA
FTLHVTVLILLK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036408	PSI_PsaA/B_sf
IPR001280	PSI_PsaA/B