prot_H-paniculata_contig19014.4765.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19014.4765.1
Unique Nameprot_H-paniculata_contig19014.4765.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length156
Homology
BLAST of mRNA_H-paniculata_contig19014.4765.1 vs. uniprot
Match: A0A6H5JH84_9PHAE (Mre11_DNA_bind domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JH84_9PHAE)

HSP 1 Score: 274 bits (701), Expect = 1.700e-84
Identity = 130/154 (84.42%), Postives = 144/154 (93.51%), Query Frame = 0
Query:    1 VDDVEVNPILIQKGRTKLALYGMGSMRDERLNRMWQQKKVKFLRPLEDDGGKDFFNIFILHQNRDLGRGKKSCIHESMIPEWMDLVIWGHEHECQASQAIDPIESLVGTFRIAQPGSSVATSLCEGESVAKHVGILEVRRNDFRLIKQPLSQVR 154
            VDDVEVNPILIQKG TK+ALYGMGSMRDERLNRMWQQKKV+FLRPLEDDGGKDFFN+F+LHQNRDLGRGKK+CIHESMIPEW+DLVIWGHEHECQ    ++P+ESLVGTFRI+QPGSSVATSLCEGE+V K+VG+LE+R NDFRL   PLSQVR
Sbjct:  119 VDDVEVNPILIQKGLTKVALYGMGSMRDERLNRMWQQKKVRFLRPLEDDGGKDFFNVFVLHQNRDLGRGKKNCIHESMIPEWIDLVIWGHEHECQ----VEPMESLVGTFRISQPGSSVATSLCEGEAVPKNVGLLEIRGNDFRLQAVPLSQVR 268          
BLAST of mRNA_H-paniculata_contig19014.4765.1 vs. uniprot
Match: B8C3H0_THAPS (Mre11_DNA_bind domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3H0_THAPS)

HSP 1 Score: 227 bits (578), Expect = 7.290e-70
Identity = 112/154 (72.73%), Postives = 126/154 (81.82%), Query Frame = 0
Query:    1 VDDVEVNPILIQKGRTKLALYGMGSMRDERLNRMWQQKKVKFLRPLEDDGGKDFFNIFILHQNRDLGRGKKSCIHESMIPEWMDLVIWGHEHECQASQAIDPIESLVGTFRIAQPGSSVATSLCEGESVAKHVGILEVRRNDFRLIKQPLSQVR 154
            VD+V+V+P+L+QKG TK+ALYGMGSMRDERLNRMWQ KKVKFLRP EDD    +FNIF LHQNRDLGRG K+C+HESMIPEWMDLV+WGHEHEC     I P ESLVGTFRI+QPGSSVATSL +GE   KHVGIL++R   FRL   PL  VR
Sbjct:  154 VDNVQVSPVLLQKGGTKVALYGMGSMRDERLNRMWQGKKVKFLRPEEDDNR--WFNIFTLHQNRDLGRGSKNCVHESMIPEWMDLVVWGHEHEC----LITPQESLVGTFRISQPGSSVATSLTQGEGRQKHVGILDIRGQQFRLKSIPLGSVR 301          
BLAST of mRNA_H-paniculata_contig19014.4765.1 vs. uniprot
Match: A0A7S2UFV9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UFV9_9STRA)

HSP 1 Score: 229 bits (585), Expect = 5.770e-69
Identity = 116/159 (72.96%), Postives = 131/159 (82.39%), Query Frame = 0
Query:    1 VDDVEVNPILIQKGRTKLALYGMGSMRDERLNRMWQQKKVKFLRP---LEDDGGKD--FFNIFILHQNRDLGRGKKSCIHESMIPEWMDLVIWGHEHECQASQAIDPIESLVGTFRIAQPGSSVATSLCEGESVAKHVGILEVRRNDFRLIKQPLSQVR 154
            VD VEV+PILI+KG T++ALYGMGSMRDERLNRMWQ KKV+FLRP    EDD  ++  FFNIF LHQNRDLGRG K+C+HESMIPEWMDLV+WGHEHEC     I+ +ES VGT+RI QPGSSVATSL  GESV KHVGIL+VR N FR+ K PLSQVR
Sbjct:  226 VDKVEVSPILIRKGSTRVALYGMGSMRDERLNRMWQGKKVRFLRPEVDAEDDDEEENAFFNIFALHQNRDLGRGSKNCVHESMIPEWMDLVVWGHEHEC----LIEAMESAVGTYRITQPGSSVATSLSAGESVRKHVGILDVRGNQFRIKKLPLSQVR 380          
BLAST of mRNA_H-paniculata_contig19014.4765.1 vs. uniprot
Match: B7G2N6_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G2N6_PHATC)

HSP 1 Score: 218 bits (556), Expect = 8.230e-66
Identity = 107/158 (67.72%), Postives = 127/158 (80.38%), Query Frame = 0
Query:    1 VDDVEVNPILIQKGRTKLALYGMGSMRDERLNRMWQQKKVKFLRPLEDDGGKD----FFNIFILHQNRDLGRGKKSCIHESMIPEWMDLVIWGHEHECQASQAIDPIESLVGTFRIAQPGSSVATSLCEGESVAKHVGILEVRRNDFRLIKQPLSQVR 154
            VD VE++P+LIQKG T+LALYGMGSMRDERLNRMWQ KKV+FLRP EDD   +    FFN+F LHQNRDLGRG K+C+ ESMIPEWMDLV+WGHEHEC     I+  ES+VGTFRI QPGSSVATSL  GE+V K VG+++V+  +FR+   PL+QVR
Sbjct:  180 VDQVEISPVLIQKGATQLALYGMGSMRDERLNRMWQGKKVRFLRPAEDDEDNEHDTGFFNLFTLHQNRDLGRGSKNCVQESMIPEWMDLVVWGHEHEC----LIEFSESVVGTFRITQPGSSVATSLVAGEAVRKKVGVVDVQGKNFRMHTVPLTQVR 333          
BLAST of mRNA_H-paniculata_contig19014.4765.1 vs. uniprot
Match: B7G2N5_PHATC (Double-strand break repair protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G2N5_PHATC)

HSP 1 Score: 218 bits (556), Expect = 5.380e-64
Identity = 107/158 (67.72%), Postives = 127/158 (80.38%), Query Frame = 0
Query:    1 VDDVEVNPILIQKGRTKLALYGMGSMRDERLNRMWQQKKVKFLRPLEDDGGKD----FFNIFILHQNRDLGRGKKSCIHESMIPEWMDLVIWGHEHECQASQAIDPIESLVGTFRIAQPGSSVATSLCEGESVAKHVGILEVRRNDFRLIKQPLSQVR 154
            VD VE++P+LIQKG T+LALYGMGSMRDERLNRMWQ KKV+FLRP EDD   +    FFN+F LHQNRDLGRG K+C+ ESMIPEWMDLV+WGHEHEC     I+  ES+VGTFRI QPGSSVATSL  GE+V K VG+++V+  +FR+   PL+QVR
Sbjct:  180 VDQVEISPVLIQKGATQLALYGMGSMRDERLNRMWQGKKVRFLRPAEDDEDNEHDTGFFNLFTLHQNRDLGRGSKNCVQESMIPEWMDLVVWGHEHEC----LIEFSESVVGTFRITQPGSSVATSLVAGEAVRKKVGVVDVQGKNFRMHTVPLTQVR 333          
BLAST of mRNA_H-paniculata_contig19014.4765.1 vs. uniprot
Match: A0A7S1Z5E1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z5E1_9STRA)

HSP 1 Score: 212 bits (540), Expect = 7.360e-64
Identity = 109/169 (64.50%), Postives = 128/169 (75.74%), Query Frame = 0
Query:    1 VDDVEVNPILIQKGRTKLALYGMGSMRDERLNRMWQQKKVKFLRPL-------------EDDGGKD--FFNIFILHQNRDLGRGKKSCIHESMIPEWMDLVIWGHEHECQASQAIDPIESLVGTFRIAQPGSSVATSLCEGESVAKHVGILEVRRNDFRLIKQPLSQVR 154
            VD VEV+PIL++KG T +ALYGMGSMRDERLNRMWQ KKV+FLRP              E + G++  +FNIF LHQNRD GRG K+C+HESMIPEWMDLV+WGHEHEC+    I P ESLVGTFRI QPGSSVATSL +GE+V KH+G+L++R   FRL   PLS VR
Sbjct:   91 VDKVEVSPILLRKGSTNVALYGMGSMRDERLNRMWQGKKVRFLRPENVNSPLDGTNDEDEANNGQENTWFNIFALHQNRDTGRGAKNCVHESMIPEWMDLVVWGHEHECR----IVPDESLVGTFRITQPGSSVATSLVQGEAVRKHIGLLDIRGCQFRLKPIPLSMVR 255          
BLAST of mRNA_H-paniculata_contig19014.4765.1 vs. uniprot
Match: W7UA87_9STRA (Meiotic recombination 11 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UA87_9STRA)

HSP 1 Score: 208 bits (530), Expect = 7.030e-63
Identity = 101/155 (65.16%), Postives = 120/155 (77.42%), Query Frame = 0
Query:    2 DDVEVNPILIQKGRTKLALYGMGSMRDERLNRMWQQKKVKFLR--PLEDDGGKDFFNIFILHQNRDLGRGKKSCIHESMIPEWMDLVIWGHEHECQASQAIDPIESLVGTFRIAQPGSSVATSLCEGESVAKHVGILEVRRNDFRLIKQPLSQVR 154
            D VEV P+L+QKGRT +ALYG+G+MRDERLNRMWQ+KK+KFLR  P E     DFF++F LHQNRD GRG+K+C+ ESMIPEWMDLV+WGHEHEC     + P  SL G F I+QPGSSVATSL EGE+  K VG+L+VR  +FRL   PL QVR
Sbjct:  168 DAVEVAPLLLQKGRTCMALYGLGNMRDERLNRMWQKKKIKFLRHAPRERGAAPDFFSLFALHQNRDTGRGQKNCVQESMIPEWMDLVVWGHEHEC----LVRPTRSLAGGFYISQPGSSVATSLVEGEATPKQVGVLDVREGNFRLFPVPLRQVR 318          
BLAST of mRNA_H-paniculata_contig19014.4765.1 vs. uniprot
Match: A0A7S4MXX5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MXX5_9STRA)

HSP 1 Score: 208 bits (529), Expect = 8.260e-60
Identity = 107/168 (63.69%), Postives = 124/168 (73.81%), Query Frame = 0
Query:    1 VDDVEVNPILIQKGRTKLALYGMGSMRDERLNRMWQQKKVKFLRPLEDDGGKD--------------FFNIFILHQNRDLGRGKKSCIHESMIPEWMDLVIWGHEHECQASQAIDPIESLVGTFRIAQPGSSVATSLCEGESVAKHVGILEVRRNDFRLIKQPLSQVR 154
            VD VEV P+LI+KG TK+A+YGMGSMRDERLNRMWQ KKV+FL P+   G                 +FNIF LHQNRDLGRG K+C+HESMIPE+MDLV+WGHEHEC+    I+P ES VGTFRI+QPGSSVATSL  GE+  K VGIL++R   FRL   PLSQVR
Sbjct:  183 VDKVEVAPVLIKKGSTKVAIYGMGSMRDERLNRMWQGKKVRFLEPVVAAGXXXXXXXXXXXXGVNGGWFNIFALHQNRDLGRGSKNCVHESMIPEYMDLVVWGHEHECK----IEPDESAVGTFRISQPGSSVATSLTAGEAEKKQVGILDIRGQSFRLRPVPLSQVR 346          
BLAST of mRNA_H-paniculata_contig19014.4765.1 vs. uniprot
Match: A0A7S3ZYR3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZYR3_9STRA)

HSP 1 Score: 203 bits (517), Expect = 1.150e-59
Identity = 97/153 (63.40%), Postives = 122/153 (79.74%), Query Frame = 0
Query:    2 DDVEVNPILIQKGRTKLALYGMGSMRDERLNRMWQQKKVKFLRPLEDDGGKDFFNIFILHQNRDLGRGKKSCIHESMIPEWMDLVIWGHEHECQASQAIDPIESLVGTFRIAQPGSSVATSLCEGESVAKHVGILEVRRNDFRLIKQPLSQVR 154
            D VEV+P+L++KG T++ALYG+G+MRDERLNRMWQQK+V+FLRP +      +F+IF+LHQNRD+GRG+ +C+HESMIP W+DLVIWGHEHECQ    I P ES VGTFR+ QPGSSVA SL EGE+  KH G+L+VR  +FRL    L+ VR
Sbjct:  224 DRVEVSPVLLRKGNTRVALYGLGNMRDERLNRMWQQKRVRFLRPRDGT----YFSIFVLHQNRDVGRGRNTCVHESMIPAWIDLVIWGHEHECQ----IKPRESAVGTFRVCQPGSSVACSLVEGEAKPKHCGLLQVRGAEFRLTPLRLTCVR 368          
BLAST of mRNA_H-paniculata_contig19014.4765.1 vs. uniprot
Match: A0A8J2X2L8_9STRA (Double-strand break repair protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X2L8_9STRA)

HSP 1 Score: 203 bits (517), Expect = 2.770e-59
Identity = 97/153 (63.40%), Postives = 122/153 (79.74%), Query Frame = 0
Query:    2 DDVEVNPILIQKGRTKLALYGMGSMRDERLNRMWQQKKVKFLRPLEDDGGKDFFNIFILHQNRDLGRGKKSCIHESMIPEWMDLVIWGHEHECQASQAIDPIESLVGTFRIAQPGSSVATSLCEGESVAKHVGILEVRRNDFRLIKQPLSQVR 154
            D VEV+P+L++KG T++ALYG+G+MRDERLNRMWQQK+V+FLRP +      +F+IF+LHQNRD+GRG+ +C+HESMIP W+DLVIWGHEHECQ    I P ES VGTFR+ QPGSSVA SL EGE+  KH G+L+VR  +FRL    L+ VR
Sbjct:  157 DRVEVSPVLLRKGNTRVALYGLGNMRDERLNRMWQQKRVRFLRPRDGT----YFSIFVLHQNRDVGRGRNTCVHESMIPAWIDLVIWGHEHECQ----IKPRESAVGTFRVCQPGSSVACSLVEGEAKPKHCGLLQVRGAEFRLTPLRLTCVR 301          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19014.4765.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JH84_9PHAE1.700e-8484.42Mre11_DNA_bind domain-containing protein n=2 Tax=E... [more]
B8C3H0_THAPS7.290e-7072.73Mre11_DNA_bind domain-containing protein (Fragment... [more]
A0A7S2UFV9_9STRA5.770e-6972.96Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
B7G2N6_PHATC8.230e-6667.72Predicted protein (Fragment) n=1 Tax=Phaeodactylum... [more]
B7G2N5_PHATC5.380e-6467.72Double-strand break repair protein n=2 Tax=Phaeoda... [more]
A0A7S1Z5E1_9STRA7.360e-6464.50Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
W7UA87_9STRA7.030e-6365.16Meiotic recombination 11 n=1 Tax=Nannochloropsis g... [more]
A0A7S4MXX5_9STRA8.260e-6063.69Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S3ZYR3_9STRA1.150e-5963.40Hypothetical protein (Fragment) n=1 Tax=Pelagomona... [more]
A0A8J2X2L8_9STRA2.770e-5963.40Double-strand break repair protein n=1 Tax=Pelagom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029052Metallo-dependent phosphatase-likeGENE3D3.60.21.10coord: 1..154
e-value: 2.0E-59
score: 203.0
NoneNo IPR availablePANTHERPTHR10139:SF1DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11coord: 1..154
NoneNo IPR availablePANTHERPTHR10139DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11coord: 1..154
NoneNo IPR availableSUPERFAMILY56300Metallo-dependent phosphatasescoord: 4..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19014contigH-paniculata_contig19014:300..4260 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19014.4765.1mRNA_H-paniculata_contig19014.4765.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19014 300..4260 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19014.4765.1 ID=prot_H-paniculata_contig19014.4765.1|Name=mRNA_H-paniculata_contig19014.4765.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=156bp
VDDVEVNPILIQKGRTKLALYGMGSMRDERLNRMWQQKKVKFLRPLEDDG
GKDFFNIFILHQNRDLGRGKKSCIHESMIPEWMDLVIWGHEHECQASQAI
DPIESLVGTFRIAQPGSSVATSLCEGESVAKHVGILEVRRNDFRLIKQPL
SQVRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029052Metallo-depent_PP-like