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Homology
BLAST of mRNA_H-paniculata_contig190.4761.1 vs. uniprot
Match: D7G5A4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5A4_ECTSI) HSP 1 Score: 1036 bits (2680), Expect = 0.000e+0 Identity = 624/1082 (57.67%), Postives = 736/1082 (68.02%), Query Frame = 2
Query: 275 IVPRRMKPSKKGRYGRTAGKNYPPQVKKQLGTANTLYVQNKVNEALDVLSEVIRTCPQIPEPYALLGLIYLDGGNLNSALMFYKLACTRDPKNIFYHEQGVRIARDLGDQQSLLQLVQTLARLQPTDLRLAIDKATCLVELDKPKQALDSYAKAAKRFPRNLGIYLELAESVENVVLSPPQHIMVYQALASCLRRAMGKRFLGPDVKDLADAFAARLREYKLEGPKPKHLPPRRRGLPSRSVYEAATKATDLLVAKLMESRKRQEPQYEVAVQVVEGLVAWLDVCRRMAARIEAAGGRKDGYGNKNKENSQEELDSDSDLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSG--EDEPMCRFVVERTTLVRYGICQLYCGEKRKASQAFAFVCNENADGEYGDMMLEIAKVYGETDNVAESVLFLRQVTQSSHPRRYLAGVQLGAAYAAQGQHELASASYSAVIKECPQHAAALAGLAEAAYWSGKRVAPKALLELNCAIEKFSGTWA-GEQPQPPVEDDDEGEEAYGFQRLQLLLQWATLNRMTGNSANFASVALPLVSVALGQMDQRAKFDMEQTVAAHASHAARERARRGTGSEREVNEPGSQQQDNVADGGLQGEEEASDKDSSTLSRSRDVQWRPSSSPSLLPRRAWQDGLPGKISTLTLQLSGTIDVIGRVGRQAVFWHVIELVRSLRELDFPEDVDVVSSAAISQTGFLRSVEREDLQVVSGKDNLVVLRSMPGGCPIAGPASRQGVLMGP-VRGAMSAPESGGD--TAFAAASEQYFTPPWRCIEERYDPTMPQRVGTGWRSSTRS--SAGPRRSRSRALMELAERKKEGDAICTIVLALSRTPGNDAMWNLMQRVASERGVDAGDGGFHGEQVEALVGRHREQAQGLIYRGHDAAMWSRAKQALKLYGQAHALRPAEPLPLLCLGTHIMRMVTVMETMVENDGVCVLQALACLHRYAELRRSHPTNASSVTGGTAGNSARSAPA-VPEAVLEQEIWYNLGRGYHQVGLDELAMEYYNRALRVEDERGRELQNWHGGG-GVTKETAHNLCTLYKSCGSTAMALGIMHKYLAV 3490
V RR K K GR GRTAGKNYPP+++ LG A LYV+ KV EA LSEV+ C IPEPYALL +IY DGG ALMFYKLAC RD KN H++ RIA LGD S L+ ++ LARL+P DL +AI++A CL+EL K KQALD YAKAAKRFPR L IYL+LAE VE V SP Q+I V+QALASCLRR +GKR+LGPDV+DLAD F+ARLRE KLE PKPK LP RR GLPS+ E A AT LLV KLMESRKRQEPQYEVAVQVVEGL +WL+ C R+A R + +G G +++ ELDS +R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EDEPM F ++ ++RYGICQLYCGEK KA A F+ +E ADG +G MMLE+AKVY ET + ES+ LR V QS HPR LA VQLGAAYA+QG+HELAS +YS V+ E P HAAALAG+AEAAYW GK P AL L+ A+E+ + W G P EDDDEGE+A FQRLQLL+QWATL+ M N A+FA VA+PLVSVALGQ+ QR +F+ ++ P + P R+ + G+ L +VGR+AVFWH++E+VRSL+ L +V + AA+ G LR +E+EDLQ V + VLR+MPGG PI GPASR+G L+GP + G SA G D TA A SEQY+ PPWRC+EE+ D +P+R G WR TRS GPRRSR RALMEL ERK +GDAICT V ALSR PGNDA+WNLMQRVA ERGV+ DGGFHGEQVEALV RHRE+ QGL++R HDAA+W+RAK AL+LY AHA RP EPLP+LCL HI R VTVMETMVENDGVCVLQALACLHRYA LR+ +A T G+++ SA A +PEAVLEQEI YNLGR YHQVGL ELAMEYY+RAL+V+DERG EL++W G GVTKETAHN+C LYK G TAMAL +++KYLAV
Sbjct: 64 FVNRRAKKPKTGRIGRTAGKNYPPEIQAALGRARMLYVKGKVVEASTELSEVVIQCSSIPEPYALLAMIYQDGGKHEEALMFYKLACARDTKNWGNHQEVARIAGILGDHTSRLEALKVLARLRPNDLNVAIERARCLLELQKSKQALDVYAKAAKRFPRKLDIYLDLAECVECV--SPQQNIFVHQALASCLRRVVGKRYLGPDVRDLADGFSARLREIKLEHPKPKRLPARRPGLPSKREGEVAMTATALLVGKLMESRKRQEPQYEVAVQVVEGLGSWLNSCHRIACRDDLEYESGEG-GEEDELEGDGELDSXXXVRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEEDEPMDTFELDPEIVLRYGICQLYCGEKEKADNALLFLKDEEADGPHGHMMLEVAKVYAETGYLVESLELLRNVAQSKHPRHRLASVQLGAAYASQGKHELASNTYSVVLAERPHHAAALAGIAEAAYWRGKGTVPAALSALSTAVERATKAWTDGGLAASPAEDDDEGEDATAFQRLQLLMQWATLSLMENNRADFACVAVPLVSVALGQLVQRQEFEQQKP------------------------------------------------------------------PPVPPVRSQETARSGRAGPTKPGLPSGSKQGEQVGRRAVFWHLVEVVRSLKALGSSAEVKKLVDAALQPNGLLRGLEKEDLQAVVANADTAVLRTMPGGSPIHGPASREGFLLGPAITGDPSANPDGDDSPTAVALMSEQYYPPPWRCVEEKDDDGLPRRAGRAWRPPTRSLHGTGPRRSRGRALMELDERKDDGDAICTTVRALSRRPGNDAVWNLMQRVAMERGVEQADGGFHGEQVEALVSRHRERPQGLLHRAHDAAIWNRAKHALRLYSHAHATRPEEPLPILCLAMHICRTVTVMETMVENDGVCVLQALACLHRYAHLRKEQAQSAGE-EDPTVGSTSGSADATIPEAVLEQEIMYNLGRAYHQVGLPELAMEYYSRALQVKDERGDELRSWQGSDDGVTKETAHNMCALYKRNGQTAMALSVLNKYLAV 1075
BLAST of mRNA_H-paniculata_contig190.4761.1 vs. uniprot
Match: A0A485LKH2_9STRA (Aste57867_22610 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKH2_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.210e-13 Identity = 68/235 (28.94%), Postives = 114/235 (48.51%), Query Frame = 2
Query: 2792 LALSRTPGNDAMWNLMQRVASERGVDAGDGGFHGEQVEALVGRHREQAQGLIYRGHDAAMWSRAKQALKLYGQAHALRPAEPLPLLCLGTHIMRMVTVMETMVENDGVCVLQALACLHRYAE--LRRSHPTNASSVTGGTAGNSARSAPAVPEAVLEQEIWYNLGRGYHQVGLDELAMEYYNRALRVEDERGRELQNWHGGGGVTKETAHNLCTLYKSCGSTAMALGIMHKYLAV 3490
L L P N WNL V ++ GV + +H + + ++ +H + ++ G ++ A+ A+ AH RP +PL L C+G + M ++ T+V+ + V +A A L Y E +++ PT G TA + + E WYN+GR YHQ+ L+ LA+ Y R LR + + + + + +ETA+NL +YK G+T +A ++H YL V
Sbjct: 723 LNLLEEPTNLGYWNLFGHVINQTGVFS----WHQKFLAKILRQHPKCYPAMVLAGLHSSASDSAQLAVGELTLAHLQRPEDPLALFCIGLSYLNM-SMFRTVVDRQ-LTVAKAFAFLQLYQEKRIKQLEPTQ----KGLTA------------EMGQVESWYNIGRAYHQLELNHLAIAMYERVLRFYEGQKESIPPEYQ---LCRETAYNLSLIYKQSGATDLASYLVHTYLTV 932
BLAST of mRNA_H-paniculata_contig190.4761.1 vs. uniprot
Match: A0A6G0XWV3_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWV3_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 2.050e-13 Identity = 67/234 (28.63%), Postives = 111/234 (47.44%), Query Frame = 2
Query: 2792 LALSRTPGNDAMWNLMQRVASERGVDAGDGGFHGEQVEALVGRHREQAQGLIYRGHDAAMWSRAKQALKLYGQAHALRPAEPLPLLCLGTHIMRMVTVMETMVENDGVCVLQALACLHRYAELR-RSHPTNASSVTGGTAGNSARSAPAVPEAVLEQEIWYNLGRGYHQVGLDELAMEYYNRALRVEDERGRELQNWHGGGGVTKETAHNLCTLYKSCGSTAMALGIMHKYLAV 3490
L + P N WNL V ++ GV + +H + + ++ +H + ++ G ++ A+ A+ AH RP +PL L C+G + M ++ T+V+ + V +A A Y E R + N S +T T + E WYN+GR YHQ+ L+ LA+ Y R LR + G+E+ + + +ETA+NL +YK G+ +A + H YL V
Sbjct: 702 LNILEEPENYGYWNLFGHVINQTGVFS----WHQKFLAKILRQHPKCYPAMVLAGLHSSASDSAQLAVGELTLAHLQRPDDPLALFCIGLSYLNM-SMFRTVVDRQ-LTVAKAFAFFQLYQEKRFKQLQDNVSGLTSETG---------------QVESWYNIGRAYHQLELNHLAIAMYERVLRFYE--GKEIPPEYQ---LCRETAYNLSLIYKQSGAVDLARYLTHTYLTV 909
BLAST of mRNA_H-paniculata_contig190.4761.1 vs. uniprot
Match: A0A024U4N5_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U4N5_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 4.620e-13 Identity = 65/233 (27.90%), Postives = 114/233 (48.93%), Query Frame = 2
Query: 2792 LALSRTPGNDAMWNLMQRVASERGVDAGDGGFHGEQVEALVGRHREQAQGLIYRGHDAAMWSRAKQALKLYGQAHALRPAEPLPLLCLGTHIMRMVTVMETMVENDGVCVLQALACLHRYAELRRSHPTNASSVTGGTAGNSARSAPAVPEAVLEQEIWYNLGRGYHQVGLDELAMEYYNRALRVEDERGRELQNWHGGGGVTKETAHNLCTLYKSCGSTAMALGIMHKYLAV 3490
L + P N WNL V ++ GV + +H + + ++ +H + ++ G ++ A+ A+ AH RP +PL L C+G + M ++ T+V+ + V +A A L Y + R A+S+ + + + E WYN+GR YHQ+ L+ LA+ Y R LR +G+++ + + +ETA+NL +YK G+T +A ++H YL V
Sbjct: 700 LNILEEPENVGYWNLFGHVINQTGVFS----WHQKFLAKVLRQHPKCYPAMVLAGLHSSASDSAQLAVGELTLAHLQRPEDPLALFCIGLSYLNM-SMFRTVVDRQ-MTVAKAFAFLQLYQQTRFKQ-LEANSI-------------GLTSELGQVESWYNIGRAYHQLELNHLAIAMYERVLRFY--QGKQVAPEYQ---LCRETAYNLSLIYKQSGATDLASYLLHTYLTV 907
BLAST of mRNA_H-paniculata_contig190.4761.1 vs. uniprot
Match: W4HAH6_9STRA (Uncharacterized protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HAH6_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 5.430e-12 Identity = 65/236 (27.54%), Postives = 110/236 (46.61%), Query Frame = 2
Query: 2792 LALSRTPGNDAMWNLMQRVASERGVDAGDGGFHGEQVEALVGRHREQAQGLIYRGHDAAMWSRAKQALKLYGQAHALRPAEPLPLLCLGTHIMRMVTVMETMVENDGVCVLQALACLHRYAELR-RSHPTNASSVTGGTAGNSARSAPAVPEAVLEQEIWYNLGRGYHQVGLDELAMEYYNRALRVEDER--GRELQNWHGGGGVTKETAHNLCTLYKSCGSTAMALGIMHKYLAV 3490
L + P N WNL V ++ GV + +H + + ++ ++ + ++ G ++ A+ A+ AH RP +PL L C+G + M ++ T+V+ + V +A A Y + R + NA +T + E WYN+GR YHQ+ L+ LA+ Y R LR + + E Q + +ETA+NL +YK G+T +A ++H YL V
Sbjct: 721 LNILEEPMNVGYWNLFGHVINQTGVFS----WHQKFLAKILRQYPKCYPAMVLAGLHSSASDSAQLAVGELTLAHLQRPEDPLALFCIGLSYLNM-SMFRTVVDRQ-MTVAKAFAFFQLYQQTRFKQLEANAVGLTSDLG---------------QVESWYNIGRAYHQLELNHLAIAMYERVLRYYEGKDVAPEFQ-------LCRETAYNLSLIYKQSGATDLASYLLHTYLTV 928
BLAST of mRNA_H-paniculata_contig190.4761.1 vs. uniprot
Match: A0A0D9XR46_9ORYZ (Uncharacterized protein n=2 Tax=Oryzinae TaxID=1648021 RepID=A0A0D9XR46_9ORYZ) HSP 1 Score: 78.6 bits (192), Expect = 8.150e-11 Identity = 58/163 (35.58%), Postives = 80/163 (49.08%), Query Frame = 2
Query: 284 RRMKPSKK-GRYGRTAGKNYPPQVKKQLGTANTLYVQNKVNEALDVLSEVIRTCPQIPEPYALLGLIYLDGGNLNSALMFYKLACTRDPKNIFYHEQGVRIARDLGDQQSLLQLVQTLARLQPTDLRLAIDKATCLVELDKPKQALDSYAKAAKRFPRNLGIY 769
RR K +KK GR T K Y P+V K+LG A L+ NK EA+ +L EV+R P + Y LLG IY + G L+ A+ F LA PK+ F ++ + +A D V R P D+ L D A +A Y KAA+ + + +GIY
Sbjct: 133 RRSKDAKKRGRRKGTRNK-YSPEVIKKLGDATLLFTDNKFEEAIPILHEVVRIAPNMSNSYHLLGSIYKERGELDKAINFLMLAAYVSPKDAFLWKKLIDMALKKEDAALARHCVLKAMRADPEDVGLKFDCANIY-------RAFCDYQKAAEIYEQIVGIY 287
BLAST of mRNA_H-paniculata_contig190.4761.1 vs. uniprot
Match: UPI0010FC7ADF (LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 3-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI0010FC7ADF) HSP 1 Score: 78.2 bits (191), Expect = 1.100e-10 Identity = 59/225 (26.22%), Postives = 99/225 (44.00%), Query Frame = 2
Query: 2801 SRTPGNDAMWNLMQRVASERGVDAGDGGFHGEQVEALVGRHREQAQGLIYRGHDAAMWSRAKQALKLYGQAHALRPAEPLPLLCLGTHIMRMVTVMETMVENDGVCVLQALACLHRYAELRRSHPTNASSVTGGTAGNSARSAPAVPEAVLEQEIWYNLGRGYHQVGLDELAMEYYNRAL-----RVEDERGRELQNWHGGGGVTKETAHNLCTLYKSCGSTAMA 3460
SR +WNLM R+ ++ G H + L+ +H ++ +++ GH+AA+ + + A+ Y +A P +PL LCLG + + + + CV+Q + + +Y LR G QE +YNLGR +HQ+GL + A+ YYN+AL G + + +ETA NL +Y++ G+ MA
Sbjct: 765 SRDRRKPIIWNLMARITAKSGDSR-----HNRYILRLLIKHPDELPLVLFSGHNAAVSASYRFAIGEYVRAFRQVPHDPLVTLCLGLQYLHLAC--QRFPRSRHTCVVQGIIFMFQYLGLR---------------GEC-------------QEAYYNLGRAFHQLGLLQFALHYYNKALAFPLYEASKSPGHTSVEFSDKHDLHRETAFNLSLIYRASGNELMA 954
BLAST of mRNA_H-paniculata_contig190.4761.1 vs. uniprot
Match: A0A397BNX3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BNX3_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.610e-10 Identity = 68/236 (28.81%), Postives = 106/236 (44.92%), Query Frame = 2
Query: 2792 LALSRTPGNDAMWNLMQRVASERGVDAGDGGF-HGEQVEALVGRHREQAQGLIYRGHDAAMWSRAKQALKLYGQAHALRPAEPLPLLCLGTHIMRMVTVMETMVENDGVCVLQALACLHRYAELRRSHPTNASSVTGGTAGNSARSAPAVPEAVLEQEIWYNLGRGYHQVGLDELAMEYYNRALRVEDER--GRELQNWHGGGGVTKETAHNLCTLYKSCGSTAMALGIMHKYLAV 3490
L + P N WNL V ++ GV + F + + A+V GL D+A + + L AH RP +PL L C+G + M ++ T+V+ + V +A A Y + R + T G + + + E WYN+GR YHQ+ L+ LA+ Y R LR + + E Q + +ETA+NL +YK G+T +A ++H YL V
Sbjct: 146 LNILEEPMNVGYWNLFGHVINQTGVFSWHQKFLYPKCYPAMV------LAGLHSSASDSAQLAVGELTL-----AHLQRPEDPLALFCIGLSYLNM-SMFRTVVDRQ-MTVAKAFAFFQLYQQTRFKQ------LEANTVG--------LTSDLGQVESWYNIGRAYHQLELNHLAIAMYERVLRYYEGKDVAPEFQ-------LCRETAYNLSLIYKQSGATDLASYLLHTYLTV 347
BLAST of mRNA_H-paniculata_contig190.4761.1 vs. uniprot
Match: UPI00148D1DCD (general transcription factor 3C polypeptide 3 n=1 Tax=Drosophila innubila TaxID=198719 RepID=UPI00148D1DCD) HSP 1 Score: 76.3 bits (186), Expect = 4.150e-10 Identity = 68/230 (29.57%), Postives = 104/230 (45.22%), Query Frame = 2
Query: 2804 RTPGNDAMWNLMQRVASERGVDAGDGGFHGEQVEALVGRHREQAQGL-IYRGHDAAMWSRAKQALKLYGQAHALRPAEPLPLLCLGTHIMRMVTVMETMVENDGVCVLQALACLHRYAELRRSHPTNASSVTGGTAGNSARSAPAVPEAVLEQEIWYNLGRGYHQVGLDELAMEYYNRALRVEDERGRELQNWHGGGGVTKETAHNLCTLYKSCGSTAMALGIMHKYLAV 3490
+ P N ++WNL+ + + GD + + L+ R Q + ++ GH S K AL +Y LR P PL+ L ++ ++ V V Q++A RYAELR +GG G S P+ +QEI+YN+GR YHQ + LA EYY RAL V+ +E G + E A+NL +Y++ G+ A + +Y V
Sbjct: 701 KQPENVSLWNLLSLI-----IQQGDDVRYFRYMRRLLQRQPSVTQEMRVFLGHYHLNCSSYKYALSVY--VPILRE-HPHPLVALSIAVVFNQLALQKKVLRKSAAVAQSVAFAQRYAELR----------SGGRKG-SDNDVPS--SCAAQQEIFYNIGRIYHQANILHLATEYYERALAVQHPLIKEHDEILG---LQHEVAYNLHLIYRNSGNKWKARQCLMRYCVV 906
BLAST of mRNA_H-paniculata_contig190.4761.1 vs. uniprot
Match: UPI0009E394F2 (general transcription factor 3C polypeptide 3-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E394F2) HSP 1 Score: 75.1 bits (183), Expect = 9.660e-10 Identity = 55/235 (23.40%), Postives = 104/235 (44.26%), Query Frame = 2
Query: 2792 LALSRTPGNDAMWNLMQRVASERGVDAGDGGFHGEQVEALVGRHREQAQGLIYRGHDAAMWSRAKQALKLYGQAHALRPAEPLPLLCLGTHIMRMVTVMETMVENDGVCVLQALACLHRYAELRRSHPTNASSVTGGTAGNSARSAPAVPEAVLEQEIWYNLGRGYHQVGLDELAMEYYNRALRV-----EDERGRELQNWHGGGGVTKETAHNLCTLYKSCGSTAMALGIMHKY 3481
+ ++R N +WN++ R+ ++ G H + L+ +H ++ ++Y GH+A + + A+ Y +A +P +P LCLG + + + CV+Q + L +Y LR G QE +YN+GR +HQ+GL + A+ YYN+AL + G + + + +E A NL +Y++ G+ +A ++ K+
Sbjct: 760 ILIARDRQNPVLWNMLSRITAKSGDSR-----HTRYILRLLIKHPDEFPLVMYSGHNALVSGSYRFAIGEYVRAFRQKPDDPFITLCLGLQYIHLAC--QRFPRKRHSCVVQGIVFLFQYLGLR---------------GEC-------------QEAFYNIGRAFHQLGLLQFAIHYYNKALELPLHEASKTGGEKTAKFSEKHDLHREAAFNLSLIYRASGNEVVAKELLLKH 959
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 1047.7 |
| Seed ortholog evalue | 3.8e-303 |
| Seed eggNOG ortholog | 2880.D7G5A4 |
| Preferred name | TFC4 |
| KEGG rclass | RC00090,RC00166,RC01100 |
| KEGG ko | ko:K11788,ko:K12261,ko:K15201 |
| KEGG Reaction | R04144,R04208 |
| KEGG Pathway | ko00230,ko01100,ko01110,ko01130,ko04146,map00230,map01100,map01110,map01130,map04146 |
| KEGG Module | M00048 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000127,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005667,GO:0005730,GO:0005737,GO:0006139,GO:0006351,GO:0006352,GO:0006383,GO:0006384,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009303,GO:0009304,GO:0009987,GO:0010467,GO:0012505,GO:0016020,GO:0016070,GO:0016072,GO:0018130,GO:0019438,GO:0031090,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032774,GO:0032991,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0042791,GO:0042797,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044798,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090576,GO:0097659,GO:0098781,GO:1901360,GO:1901362,GO:1901576 |
| EggNOG free text desc. | regulation of transcription by RNA polymerase III |
| EggNOG OGs | KOG2076@1,KOG2076@2759 |
| Ec32 ortholog description | Tetratricopeptide-like helical domain |
| Ec32 ortholog | Ec-14_006790.1 |
| EC | 6.3.3.1,6.3.4.13 |
| COG Functional cat. | EH |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko03021 |
| Exons | 5 |
| Model size | 4363 |
| Cds size | 3396 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig190.4761.1 >prot_H-paniculata_contig190.4761.1 ID=prot_H-paniculata_contig190.4761.1|Name=mRNA_H-paniculata_contig190.4761.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1132bp
MARNRETNIGESSRKDGGSKRASKTRKGESSKPRSRKRKHRSEHRGEDGG
DVDDDEIDIVPRRMKPSKKGRYGRTAGKNYPPQVKKQLGTANTLYVQNKV
NEALDVLSEVIRTCPQIPEPYALLGLIYLDGGNLNSALMFYKLACTRDPK
NIFYHEQGVRIARDLGDQQSLLQLVQTLARLQPTDLRLAIDKATCLVELD
KPKQALDSYAKAAKRFPRNLGIYLELAESVENVVLSPPQHIMVYQALASC
LRRAMGKRFLGPDVKDLADAFAARLREYKLEGPKPKHLPPRRRGLPSRSV
YEAATKATDLLVAKLMESRKRQEPQYEVAVQVVEGLVAWLDVCRRMAARI
EAAGGRKDGYGNKNKENSQEELDSDSDLRDSDEESADEERSESDGADPSD
DDGDDDDHDNSGEDEPMCRFVVERTTLVRYGICQLYCGEKRKASQAFAFV
CNENADGEYGDMMLEIAKVYGETDNVAESVLFLRQVTQSSHPRRYLAGVQ
LGAAYAAQGQHELASASYSAVIKECPQHAAALAGLAEAAYWSGKRVAPKA
LLELNCAIEKFSGTWAGEQPQPPVEDDDEGEEAYGFQRLQLLLQWATLNR
MTGNSANFASVALPLVSVALGQMDQRAKFDMEQTVAAHASHAARERARRG
TGSEREVNEPGSQQQDNVADGGLQGEEEASDKDSSTLSRSRDVQWRPSSS
PSLLPRRAWQDGLPGKISTLTLQLSGTIDVIGRVGRQAVFWHVIELVRSL
RELDFPEDVDVVSSAAISQTGFLRSVEREDLQVVSGKDNLVVLRSMPGGC
PIAGPASRQGVLMGPVRGAMSAPESGGDTAFAAASEQYFTPPWRCIEERY
DPTMPQRVGTGWRSSTRSSAGPRRSRSRALMELAERKKEGDAICTIVLAL
SRTPGNDAMWNLMQRVASERGVDAGDGGFHGEQVEALVGRHREQAQGLIY
RGHDAAMWSRAKQALKLYGQAHALRPAEPLPLLCLGTHIMRMVTVMETMV
ENDGVCVLQALACLHRYAELRRSHPTNASSVTGGTAGNSARSAPAVPEAV
LEQEIWYNLGRGYHQVGLDELAMEYYNRALRVEDERGRELQNWHGGGGVT
KETAHNLCTLYKSCGSTAMALGIMHKYLAVP* back to topmRNA from alignment at H-paniculata_contig190:34501..45119+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig190.4761.1 ID=mRNA_H-paniculata_contig190.4761.1|Name=mRNA_H-paniculata_contig190.4761.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10619bp|location=Sequence derived from alignment at H-paniculata_contig190:34501..45119+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAATGAGACACCCAAACGGATGCTCACATTCCTTGCTATCGTGATGTTGA
CTACACCGTCGGTACTCTAGTTCTAATGCGTGGCGTGCGACTTTAGCCAA
ATGGCGAGAAATCGTGAGACGAACATTGGGGAGTCCTCGAGGAAAGACGG
TGGGTCCAAACGCGCGTCGAAGACAAGAAAGGGTGAAAGCAGCAAACCCA
GAAGCAGGAAGAGGAAGCATCGGTCCGAGCATCGAGGAGAGGATGGCGGC
GACGTTGACGACGACGAGATCGATATCGTTCCGCGAAGAATGAAGCCATC
AAAGAAGGGTCGTTATGGGAGGTGCGGGAACTACGTCCACTGTTGAGTGG
ATAGGTGATGCCTGCTGTTTTTTCACCATTCGTATCGCAGAGACGGTCCA
TTCTTGTTGCACCTCAACAGGCAGTCATCAACTGCAGCAGTATTATTTTG
TACATCTACGGCATCTACATGGGGGGGGAGGAGAGCAGAAAGGGTGTCCG
CACCTTTTGGCGTTAATACTGGTTTGAATTTTTCCTGTGTGTGTGCGTGT
GTGCGTGAGTGCGTGTGTGCCCATCTGAAATTTTGCGGACGATATCCCGC
ACATGAACGTCGCGAGGTAAATAATGTAATAAGCCAACCTGGGTGATCGT
TTCGGAACAGTTTTCAGTACTGTGCTCGAGTAACTGCTCGAAATGAGTCT
TGATGGACACGGTCCTTACGAACCCGTGTAACGAATCACTGCGGGCGCAG
TTGCCCTTCGGCGCGGGTCATGGGTTTAGAATGAAGGAGTGCAAGACAAA
CATGGGCTGCATGAGCCAAGCCGTTGGTGCACTCTACCGTACAAGCGAAC
TAGAATGTCTTATATCCTGCTCTACTGCGGAGGGTCCGAGGCTAAGGCGC
CATGAGTGACGTTGAAATATATGCCAAGCTCTGCGTTCTTTTGCTGTGTT
CTAGGGCAAAAGGGAAATGGCCAAAAGACGGTGCTTCATGGTTGCCCCAT
GTCCTGTTCAACTAACCGTGCTGGTCAATTCAGCGGGTGGGGCTACCAGG
AGGACAAATGACGTACTTCCTCTGGCAGATCATCTCATGCTCTGCGGAGA
CCCTCTGAATGTTGCTGATATCGACAAAAATGCCTCTGCGAACGTATTCG
ACTATACTTATTATGGGACAGAGGAAGTATGCCTTAGGATTACGCGTGAT
TCGGGTTCCTGACGTAGCCTCGCTGAGTCCGAGCAGAAGTGCCCATTGCG
AGTTATTACCGTAACACCCTCTAGAGTAGTTGGCACCGGGTGGGAAGGCC
CTAAAAAACTCGGCTGTGCAGATCGCACCCCGGTTCGGACCAAAGCGGGG
GTGCGATACGGACCAGGTGCGGACAGGGGGAAAAATCGCGCCATGTGCGT
GCAGGTACACCGCCATATCATGTACCGTACCCCGTTATACTATGGTACAC
ATGTTCCGTCAATGAAGAAGTACTTGTACTGTACGTACAGTACAATAAGC
TGGCATACAGTAGTCATGGAGTACAATCACTAAACAAAGAGATAATAGCG
GCATGTACTCGTCGTTGTATCCTTTCATACGGTAACGGTAATACTGTAAA
TTGTAATACGCGTGCGAAGTAGGTATTCGTCATTTGCTGTGCCGTGTAGT
CTCTCCTGTGTGTAGTACAACGATCGCGGGGCTGAGCGAAGACCTTCAGA
AAAAAAAACTGCAGCTCCATAGCTACACAATGAGCTAAAGGGCGCACATG
ACCTAATGTATGACAACACCGCAAAGGGCGCGAGCAGCACGGTCGGCGGC
CCGTCCAACGATGCGAATGGGAACAGAGCGTTAGCACCATCAAACGCTGT
GCATGATTCCAGCGCTGGGACTGGTGGCACGCCGCAGGGACCTAATGATT
CTGCAGCTCCAGGTTCTGCACCTGTTGCTGACCCCAAGGCAGCAGGAGAG
GCGATTGACGAGATGGAAGCAGAGTCGACGGATAGATGAAGAACAAGAGG
CGCGAGTACCCCCGAACCTGGCTTAAAGATCGAGAGGATGGGGGGAACGC
GAGAGAGAGCCACCCGGTACTCAGAAAGCTGAAGGCTGTCGAGTATTCCT
GAACAATATGCCCTGATGGACTCGCCGTGGGCAACACAGGCACGGCAAGA
TTCCTTGGCGTGCATAGTAAGACAACCATGGAGTGATGCAAGAGCGAAGA
GCAGCTGAAGGCGCAAGTCAAAAGCGAGAAAGGCGCCAGAAGCCTTGGGA
GCAATAATAGAAGGTGCGCGGCCAGCAGCGCTGAGGTGGAGGAGGAGATG
TGTGACTGGATCAACCACAATCATCGGTTGTCCCACGGCGTTGGTAGGCG
GGAGGTCTCCAACAAGCTCTCACAGCTTAAGCCCGACGCCTTTGGCGGGC
TTCCGAGCAGTGATGATGCTGCCAAGATGGAACAGTTCAACAAAATGACA
AATGGTACGCCCGGTTTCGCACGAGGAACTGGGCTTTCCATTCGTCGCCA
CACCGGCATTGGCCAAAACCTCCCACAGGGCTATGAGGGGAGGTCATGGG
CGTGGGTGCTGAAAGTTCGCACCGCCAACAAGCAGGCCACCGAGATCTAC
GCCGCCAAGCGTTCAGCAGCTACGCTGAGCGCACAGGGTTAGAGCGCGAA
TACGGCTGTGAATGTGGAAGCGATGGAGCTATCTCCTGAGTAGCTGTTCG
GAGATGTTCCGTGAGTTGGGGAACGTGGATCAAACCCCAATCCAGCACGA
GATGCCGGTGAAGACCACGCTAGATACGACAGGGTGAAGGACGCGCGTAT
TTCTACCGCAGGTAAGGCCGCCGAATATTCGTACTGTACAGTACCTGTGG
TAGAATTGTGAGTTCAGTTGCAGAAAACGTTCATGTCTCTAATTTGGCGG
TTTGTGCTTTGTTTTATTGTGTTTGATATACGGTGCTGTGCTCCACCGTA
CTGTACTAACCGTACTGACTCATTACAGTAGTAGAGTCAGTGCTCTGTGC
ACTATCTAATGTACTGCACTGTTCTGTACTCACTGTACACTCCTGACTGC
ACTGTCTGTTTTTGTTTTGTGCTGCACTGACTGTATTTGTGTCGTATTTC
AGATCCCAAACTACCGACCATACTCGATCACAATAAAGTTAGTTGTCTCG
CTGTGATGGGAGATGAACGAAAGGTGACTCCGCGCATCACTTTCAACGGC
ACGCCGTTCATCCCCCCACGCAGTCTCACACGGGGAGGTCGCCTGCACAG
TGGAAGAGTTTCGTTGTGTGGGAGATCAGTACGGTCGGTCGCAGCCCGTA
TGGGCACCCCCGCACGCCATGTCGTACAGATTGCATGAAAACAGCTTGTG
TGACAATCGGGATTGCAAGCTGTAGCTGCAGGAAAAGTGGAACGGCTGCC
CGGGGACAAGCTTGTTTAGCCGGCAATCTAGCGTGTTGATGTTCGACGTC
TACAAGTGCCACCGTGACCAGAAGTTCCAGGAGAGCTTGCAGGGGGCCAA
CATGGACACTATCCTCATTCCTTGCGGCCTAACAGCGATTGACCAGCCTT
GCAACCGCATGCTCAACAAGGAGATCTAGCGCGGAGTGCGGGGGAATACA
TTTCCTGGAACGCCACTACTGTGGAGACCCGAAAACAGCTAAACTCAAGC
CCCTCGGGAGGAGCGTGATGTCAACGTGGGTCAACGAGGTCTGGGATAAA
ATATAGGCCAACCTGGCGAGGAAGTGCTTCAAGATCTGCAGACTCACGCT
CAACCTTGACGGGAGCGAGGGCCACGAGTGGTGTGAATACACGTTCGGTA
AGGACTATCACACAGTCCTGACGGAGCAGCGGGCCGAGTAGGAGGATGTA
CATTTGTAGCATCACCCTGGAGTCGCTACAGCTACCCGTTGTACAGGGTA
ACGGGCTCACCCCCAACTCTATCACCAATGCGTCGAAGGATGTTTCAGAG
AAGTTAGTCAATAGCCCAGAGGGCGGGGACAAAGCACGGACAATGAGAAC
GATGGGAGCGACATCGAGGCGTCGATGTTATTGAATTGGGAGATGGCTCC
GATTCCAACGTCGAACTGCTGTGTTTCGGTTCCTGTCGTGTGCTCATTCA
GCACGCAGCCGTTTCAATAGGCTTAAGGAATAGGACCGCGTCAAGTAGGT
ATTGCTGGTCGCGTGTGTTTTCGGTTTCTTGTTCTTGGCGTTGTTTCTGT
TTGTTTCTGCTTTTGTTACATGTTTCTGGAGCCGTAGTCTATGTCAGAGT
TTTGGTTTTTGTAATCCCAGGTCTACAACCATCGCACTAAATGTTTCCTG
AATGTTTGATGTATGGCTTGAGTTACCAAATGGTAAAGAGCGAACGCGCA
TTAATGTGTTGTAAGCTCTTGTGCTGTGCAGTACTGACCATAATCCATCA
GATGCCCTCATGCAAATACTGATACCTTCTAGACTGTACTTCAATATCCA
TAAAAAAGTGCTTTTTGAAGACCCTTATGCTCGTTCTCCGGGCACCCCCC
CGGCATAGAAACCCGTGCACCACCCTTGAAAATCGCACCCCCGTGCGCTT
CTCAGGGGGGGGTGCCGAAGCAAAAGAACAGGCGTGTGCAGATCGCACCG
GGGTACGGATCAAAGGGGGGTGCAAACTTGGAGGGTATTATGGTATTAAC
TTTTGCCTATATCACCCATCATCTGTCGATTCCGAACAGGACCGCGGGCA
AGAATTACCCGCCACAGGTGAAGAAACAGCTCGGTACCGCTAATACACTG
TACGTGCAGAACAAGGTTAACGAAGCTTTGGATGTGCTCTCGGAAGTGAT
CAGAACCTGCCCTCAGGTGAGTCCCTGCATCTGACAGCCTGACGAGGGAG
CACATCTTTTTAACATGCATTCTGAGTAGGGTAACGATAGTTAGCTAGCA
ATGACTGCTCGTTTTCTTCGTCTGGGATGCTACATGAATCGGTAGCTGAT
ATCCTTAACCCGTTGCACATCCTGGGTGTTGATTCGAGCTCGGCTCGTGC
TCTAGCGTTTCGACCAGCATACCACAGTATTCCATCCCTCCGCCGAGCAT
GGTCACATGACCTTGCACCGGTCATAAGTCCTACAGACAGCACACGTAGT
GTATTACGTACTCCTGCGTATCACATGGGTCACTATATCGATGGCCGACT
TCCGTCTTCCTTAACTAAAATGAAACAGATCCCTGAGCCGTATGCCCTGC
TTGGGCTTATCTACCTGGATGGAGGAAATCTCAACAGTGCCCTCATGTTC
TACAAGCTGGCATGCACGCGCGACCCGAAAAACATATTCTATCATGAACA
AGGAGTGCGAATCGCCCGGGATCTCGGGGATCAACAATCGCTTTTACAAC
TCGTCCAAACGCTGGCTCGCCTTCAGCCTACCGACCTCAGGTTGGCGATC
GACAAGGCAACTTGTCTTGTTGAGCTCGACAAGCCAAAGCAGGTGAGCAC
ATGGTCACCGCTTTCCTGTGCTATGCAACGCCAACATAGACGAAACGTGA
AGCAAACCACTACCAACGCTTCAAAAATGAAATTGAGCGCCCCCCCCGAT
GCGTTATGTTTCTAGGTACTGTTCACTTGACTCCATTTTAGCGTTCTAAT
ATATTCTAGCGACTTCAACACTATTGTCCTCCGTTTGTTGTTGACTGTTA
TGTGTCAAGACGGAGCCCGTCTGTAGATGAAACACTCTCATCTCTCTGTC
GTCACCTTGTATCCCTCGATTTCTACGCCCAGGCGCTGGATTCTTACGCG
AAGGCCGCGAAGCGCTTCCCGAGGAATCTTGGCATCTACCTAGAGCTCGC
GGAAAGCGTTGAAAACGTTGTTCTATCCCCACCGCAGCACATAATGGTTT
ACCAGGCTTTGGCGTCGTGCCTTCGACGTGCCATGGGGAAGCGATTCCTG
GGGCCAGATGTGAAGGATCTCGCTGACGCATTCGCAGCGAGACTGCGCGA
GTACAAGCTGGAAGGACCAAAGCCGAAACACCTGCCACCAAGACGCCGCG
GACTGCCCTCCAGAAGCGTGTACGAGGCAGCGACGAAGGCCACCGATCTC
CTCGTTGCCAAGCTGATGGAAAGCCGCAAGAGACAAGAGCCACAGTATGA
AGTTGCCGTCCAGGTCGTAGAGGGACTCGTAGCCTGGCTGGACGTCTGCC
GACGCATGGCGGCGCGTATCGAGGCGGCCGGCGGACGCAAGGATGGGTAC
GGCAATAAGAATAAGGAAAACAGTCAGGAAGAGCTCGATAGCGACAGTGA
CTTGCGCGACAGCGATGAAGAGAGTGCAGACGAGGAAAGGAGCGAGTCGG
ATGGAGCCGATCCCAGCGACGACGATGGCGACGATGATGACCACGACAAC
AGCGGGGAGGACGAGCCGATGTGTAGGTTCGTTGTGGAGCGCACCACTCT
TGTACGCTACGGCATCTGCCAGCTGTACTGTGGCGAAAAGAGGAAAGCTT
CCCAGGCTTTTGCCTTCGTCTGCAATGAAAATGCCGATGGCGAGTACGGT
GACATGATGCTGGAGATTGCAAAGGTGAGAATGGCCTCCCCCTTGTCCTG
CAGTCGTTTTTCCTTCTGTGCAGAATTATAGTCGAGCTGTCGAGTACCTT
TCCAACGAGCGATGGAAATGAAGCGGAGTGGTCGGCGTTAGATCTGCGAG
TGCTTCTAGTCGTACTACTTTGTACCCTCCTCATGGCAATCCTTCGTTCT
TGACCACGTGTAAGACCCTATGAAGAGGTGCAGTAAGTTTGGCTTGAAGA
AGCCGTTGAATGTCGATTTGCTGCATCAATAACCCCGAGGTAGTCGCGAT
CAGCTTTGACGTCGTCAAAAGTGGATCAAGGTACAAGACTAAAGAAACGT
GTTCGATCATAACGTTTCATCAAAGAGGAGCACTACAAGAAAATTATGAA
GACATTTTCGCAGTCCTCGCTTGAAAAGTTTGTCCTAAAAGTTTCATCCA
GAATTCGTTATTGGACTTGTTTCATTTTCGTCGCTTTTCGTGTTTTTTTT
ATTGAAGTGATAATCAGCACTGGGTGGACCAGCGGGTCAGTGGCCTCAGA
CCCCCCTCGCTACATGTAGGCAGGCCAGTGGCGTACCCAATTTTTCTACC
GCTGGTAGTATCACGCTAGCATATTCAGTAATAACAAATAAACTCCTTGT
AGAGCTGCGTTCTACCCGGGAGTTTCCTGTATTAGTCCTCCAAACCTGTT
TGACCCGATTCCCCCTTCATGAACATAAATGGTTTCAGTGTGTTTGGACG
GCTCTGAACTTGTATGCCAATTTGGTGCAGAAATTTTGACGGTGGACAAT
GAATAAATGTCAAAATGGTCTGTTCTATAAAAGGAAATGTAGACGTACTT
CGGTATGGAAGCATCGGATAGAGGTTTTTGCCTTAGCCTTCGGAGAAGAA
AAAAAAAAAGTCAAAATCGTCACTCCATATTTATTTTCGTATAGCTTTTC
CGATTACGAATCAGCGACTGTACCAGATATCGTGGGAAGGTGAAAGCTGA
GACCTGTTATAAGCTTCTCAGATTGGTTCTTGATGCTTCCGCCCTTTTTG
TTCGTGGCGAGAACGAAGCATAAAACTGCAGTTTTTTCATCGGCACTAGT
TGAAATCGGCAGTCACAAGTGAAAAGGCCCAAAGGCCCAAGTAAAAATAT
CGATTCCGAAAGCTGCTTTCGAGAGCTATATGAAATAGAAAAAACATATA
TACATTTTCCCCAGTCTTTTAACTTGGTTCATATTACTGTCTCATGTACC
CCAATTGCAGGTGTACGGTGAGACAGATAATGTGGCGGAGTCAGTGCTGT
TTCTTCGACAGGTGACCCAGTCATCGCACCCCCGTCGTTATCTAGCGGGT
GTGCAACTGGGCGCGGCGTATGCAGCGCAAGGCCAGCACGAGCTGGCGTC
GGCATCTTATAGTGCTGTAATAAAGGAATGCCCTCAGCACGCGGCGGCTC
TAGCTGGCTTGGCAGAGGCTGCCTACTGGAGTGGAAAGCGAGTAGCTCCG
AAGGCGTTGTTGGAGTTGAACTGCGCTATCGAGAAGTTTTCTGGGACTTG
GGCGGGGGAACAACCGCAGCCACCGGTGGAGGACGATGATGAAGGGGAGG
AAGCCTACGGATTTCAGCGATTGCAGCTTCTTTTACAATGGGCCACGCTC
AACCGGATGACCGGAAACTCCGCAAATTTCGCCAGCGTTGCGCTTCCCCT
CGTCAGCGTCGCTCTCGGTCAGATGGACCAACGCGCCAAATTCGACATGG
AGCAGACCGTCGCCGCCCACGCGTCACATGCAGCAAGAGAACGAGCACGG
CGTGGCACGGGATCAGAGAGGGAAGTAAATGAGCCTGGGAGCCAGCAGCA
AGATAACGTGGCGGACGGGGGGCTTCAGGGAGAAGAGGAAGCAAGCGATA
AGGATTCCAGTACGTTGTCGCGATCGCGGGATGTTCAATGGAGGCCGAGC
TCCTCGCCCTCGTTGTTGCCTCGGCGGGCGTGGCAGGATGGCCTTCCGGG
CAAGATTTCGACGTTAACACTGCAGCTTTCAGGTACCATAGACGTCATCG
GGCGGGTGGGACGGCAAGCTGTATTCTGGCATGTCATCGAACTCGTTCGT
TCGCTGCGTGAGCTGGACTTCCCAGAAGATGTAGACGTCGTATCGTCTGC
TGCCATCAGTCAAACGGGCTTCCTCAGGAGTGTAGAACGAGAAGATCTGC
AGGTCGTCTCTGGAAAAGACAATTTAGTGGTCCTTCGCAGCATGCCCGGT
GGCTGTCCAATCGCTGGTCCCGCGTCCCGCCAAGGCGTCTTGATGGGTCC
TGTTCGTGGTGCCATGTCTGCACCAGAATCCGGCGGAGACACGGCTTTCG
CGGCCGCGTCGGAACAATACTTCACCCCGCCGTGGCGATGCATAGAGGAA
AGGTACGACCCCACTATGCCACAGCGAGTCGGGACCGGTTGGCGGTCGAG
TACTCGCTCAAGTGCGGGCCCTCGCCGCAGCCGCTCCCGCGCGCTGATGG
AGCTGGCAGAAAGGAAGAAGGAGGGGGATGCCATATGCACTATCGTGCTG
GCATTATCCAGGACTCCGGGAAACGATGCAATGTGGAACCTTATGCAGCG
AGTAGCGTCAGAGCGGGGAGTGGACGCCGGCGACGGCGGTTTCCATGGGG
AGCAGGTAGAGGCGCTTGTCGGAAGGCACCGAGAACAGGCGCAGGGCTTG
ATCTACCGTGGGCACGATGCGGCCATGTGGAGTCGCGCGAAACAAGCTCT
AAAGTTGTATGGCCAGGCGCATGCCCTTCGCCCCGCGGAGCCCCTGCCGC
TCCTGTGCCTAGGCACACATATCATGCGTATGGTAACGGTCATGGAGACT
ATGGTGGAGAATGATGGAGTGTGCGTCCTCCAGGCACTTGCTTGTCTTCA
CCGCTATGCTGAGCTGCGCAGATCTCATCCCACCAACGCGAGCAGCGTCA
CGGGTGGTACCGCAGGCAACAGTGCCCGTTCAGCGCCCGCGGTGCCAGAG
GCAGTGCTGGAACAAGAGATTTGGTACAATCTGGGCCGGGGATACCACCA
GGTGGGGCTGGATGAGCTGGCCATGGAGTATTACAATAGAGCTTTGCGAG
TGGAGGATGAGCGCGGGAGGGAGTTGCAGAACTGGCACGGGGGTGGTGGA
GTAACGAAGGAAACCGCCCATAACTTGTGCACTTTGTATAAGAGTTGCGG
ATCCACGGCGATGGCTCTCGGTATCATGCACAAGTATCTTGCCGTGCCAT
GATGCAAAACGACACATGCTGATCTGGGCAGTGTCTAGGCAGTTCAAGAA
CTAATATCAGACGATTGGCATAAAATCGATTCAAGCCGCCCAGGACCTGG
AGTGTCCTTGCGGAAGCACTGTATATTACATGCAAGATAAAGAGAAGAGG
CGAATAGGTGTCAGTGGGCCAAAAAAAAACGGCGAAAAGCTAAATGTTGG
GTATAGAGTTGTGCGTGCTTCATGTTGTGTTGGTATTGTGATGGTAATAG
TGGAACAGCACCGACAATAACACCACTGGTGTATGTGTGCAGAAAGTGTG
ACAAGTGGTGGTGGGATTGAATCTTGTGCTTGGCTTGCTGTGCATGATGC
TTGGTGAATATAATACCACGGGTATGTTGGTTTTATGTTGTTACCACGAG
TTCGCCCAGCCTACACATTTCGACAAGTGACGGGGCGCATCTCAGTAGTG
CATACAACACTGTTGTTGTTTTTACCCAGATAGCTACATACGTGCGTGGT
TTGTGGGTGGGCATGGTGTGAATGATTACTAGTACACTATACCCTGCAGC
TCGAACAGCAGGGTGGTGATTCAGCAGTGGCAGGGAGTAAATACTGGTAC
ATGTAGGAAATTACCGATACTTGCTTCAAAATCATTCCAGGCGGAGCGTG
TCCGAACGTCCCGGTTGATAAGACTGTATTGGTCGTTGAACGCACATATA
AATATATTGGGAGGTTGAAGCAATCAAAATATTAGTACATTTATCAATAT
ATCGGTGGAGTACTGGTGCGAGTGAACCGAGCCCAAAAGCTCCCCCCTGG
CCTCGTGAAGGGTCTCGCCATAGGCACAAACAATACGCGTTTTGGCTCCA
TCTCTCTCCAAAATCGAGA back to topCoding sequence (CDS) from alignment at H-paniculata_contig190:34501..45119+ >mRNA_H-paniculata_contig190.4761.1 ID=mRNA_H-paniculata_contig190.4761.1|Name=mRNA_H-paniculata_contig190.4761.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=6792bp|location=Sequence derived from alignment at H-paniculata_contig190:34501..45119+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGAGAAATCGTGAGACGAACATTGGGGAGTCCTCGAGGAAAGACGG
TGGGTCCAAACGCGCGTCGAAGACAAGAAAGGGTGAAAGCAGCAAACCCA
GAAGCAGGAAGAGGAAGCATCGGTCCGAGCATCGAGGAGAGGATGGCGGC
GACGTTGACGACGACGAGATCGATATCGTTCCGCGAAGAATGAAGCCATC
AAAGAAGGGTCGTTATGGGAGATGGCGAGAAATCGTGAGACGAACATTGG
GGAGTCCTCGAGGAAAGACGGTGGGTCCAAACGCGCGTCGAAGACAAGAA
AGGGTGAAAGCAGCAAACCCAGAAGCAGGAAGAGGAAGCATCGGTCCGAG
CATCGAGGAGAGGATGGCGGCGACGTTGACGACGACGAGATCGATATCGT
TCCGCGAAGAATGAAGCCATCAAAGAAGGGTCGTTATGGGAGGACCGCGG
GCAAGAATTACCCGCCACAGGTGAAGAAACAGCTCGGTACCGCTAATACA
CTGTACGTGCAGAACAAGGTTAACGAAGCTTTGGATGTGCTCTCGGAAGT
GATCAGAACCTGCCCTCAGGACCGCGGGCAAGAATTACCCGCCACAGGTG
AAGAAACAGCTCGGTACCGCTAATACACTGTACGTGCAGAACAAGGTTAA
CGAAGCTTTGGATGTGCTCTCGGAAGTGATCAGAACCTGCCCTCAGATCC
CTGAGCCGTATGCCCTGCTTGGGCTTATCTACCTGGATGGAGGAAATCTC
AACAGTGCCCTCATGTTCTACAAGCTGGCATGCACGCGCGACCCGAAAAA
CATATTCTATCATGAACAAGGAGTGCGAATCGCCCGGGATCTCGGGGATC
AACAATCGCTTTTACAACTCGTCCAAACGCTGGCTCGCCTTCAGCCTACC
GACCTCAGGTTGGCGATCGACAAGGCAACTTGTCTTGTTGAGCTCGACAA
GCCAAAGCAGATCCCTGAGCCGTATGCCCTGCTTGGGCTTATCTACCTGG
ATGGAGGAAATCTCAACAGTGCCCTCATGTTCTACAAGCTGGCATGCACG
CGCGACCCGAAAAACATATTCTATCATGAACAAGGAGTGCGAATCGCCCG
GGATCTCGGGGATCAACAATCGCTTTTACAACTCGTCCAAACGCTGGCTC
GCCTTCAGCCTACCGACCTCAGGTTGGCGATCGACAAGGCAACTTGTCTT
GTTGAGCTCGACAAGCCAAAGCAGGCGCTGGATTCTTACGCGAAGGCCGC
GAAGCGCTTCCCGAGGAATCTTGGCATCTACCTAGAGCTCGCGGAAAGCG
TTGAAAACGTTGTTCTATCCCCACCGCAGCACATAATGGTTTACCAGGCT
TTGGCGTCGTGCCTTCGACGTGCCATGGGGAAGCGATTCCTGGGGCCAGA
TGTGAAGGATCTCGCTGACGCATTCGCAGCGAGACTGCGCGAGTACAAGC
TGGAAGGACCAAAGCCGAAACACCTGCCACCAAGACGCCGCGGACTGCCC
TCCAGAAGCGTGTACGAGGCAGCGACGAAGGCCACCGATCTCCTCGTTGC
CAAGCTGATGGAAAGCCGCAAGAGACAAGAGCCACAGTATGAAGTTGCCG
TCCAGGTCGTAGAGGGACTCGTAGCCTGGCTGGACGTCTGCCGACGCATG
GCGGCGCGTATCGAGGCGGCCGGCGGACGCAAGGATGGGTACGGCAATAA
GAATAAGGAAAACAGTCAGGAAGAGCTCGATAGCGACAGTGACTTGCGCG
ACAGCGATGAAGAGAGTGCAGACGAGGAAAGGAGCGAGTCGGATGGAGCC
GATCCCAGCGACGACGATGGCGACGATGATGACCACGACAACAGCGGGGA
GGACGAGCCGATGTGTAGGTTCGTTGTGGAGCGCACCACTCTTGTACGCT
ACGGCATCTGCCAGCTGTACTGTGGCGAAAAGAGGAAAGCTTCCCAGGCT
TTTGCCTTCGTCTGCAATGAAAATGCCGATGGCGAGTACGGTGACATGAT
GCTGGAGATTGCAAAGGCGCTGGATTCTTACGCGAAGGCCGCGAAGCGCT
TCCCGAGGAATCTTGGCATCTACCTAGAGCTCGCGGAAAGCGTTGAAAAC
GTTGTTCTATCCCCACCGCAGCACATAATGGTTTACCAGGCTTTGGCGTC
GTGCCTTCGACGTGCCATGGGGAAGCGATTCCTGGGGCCAGATGTGAAGG
ATCTCGCTGACGCATTCGCAGCGAGACTGCGCGAGTACAAGCTGGAAGGA
CCAAAGCCGAAACACCTGCCACCAAGACGCCGCGGACTGCCCTCCAGAAG
CGTGTACGAGGCAGCGACGAAGGCCACCGATCTCCTCGTTGCCAAGCTGA
TGGAAAGCCGCAAGAGACAAGAGCCACAGTATGAAGTTGCCGTCCAGGTC
GTAGAGGGACTCGTAGCCTGGCTGGACGTCTGCCGACGCATGGCGGCGCG
TATCGAGGCGGCCGGCGGACGCAAGGATGGGTACGGCAATAAGAATAAGG
AAAACAGTCAGGAAGAGCTCGATAGCGACAGTGACTTGCGCGACAGCGAT
GAAGAGAGTGCAGACGAGGAAAGGAGCGAGTCGGATGGAGCCGATCCCAG
CGACGACGATGGCGACGATGATGACCACGACAACAGCGGGGAGGACGAGC
CGATGTGTAGGTTCGTTGTGGAGCGCACCACTCTTGTACGCTACGGCATC
TGCCAGCTGTACTGTGGCGAAAAGAGGAAAGCTTCCCAGGCTTTTGCCTT
CGTCTGCAATGAAAATGCCGATGGCGAGTACGGTGACATGATGCTGGAGA
TTGCAAAGGTGTACGGTGAGACAGATAATGTGGCGGAGTCAGTGCTGTTT
CTTCGACAGGTGACCCAGTCATCGCACCCCCGTCGTTATCTAGCGGGTGT
GCAACTGGGCGCGGCGTATGCAGCGCAAGGCCAGCACGAGCTGGCGTCGG
CATCTTATAGTGCTGTAATAAAGGAATGCCCTCAGCACGCGGCGGCTCTA
GCTGGCTTGGCAGAGGCTGCCTACTGGAGTGGAAAGCGAGTAGCTCCGAA
GGCGTTGTTGGAGTTGAACTGCGCTATCGAGAAGTTTTCTGGGACTTGGG
CGGGGGAACAACCGCAGCCACCGGTGGAGGACGATGATGAAGGGGAGGAA
GCCTACGGATTTCAGCGATTGCAGCTTCTTTTACAATGGGCCACGCTCAA
CCGGATGACCGGAAACTCCGCAAATTTCGCCAGCGTTGCGCTTCCCCTCG
TCAGCGTCGCTCTCGGTCAGATGGACCAACGCGCCAAATTCGACATGGAG
CAGACCGTCGCCGCCCACGCGTCACATGCAGCAAGAGAACGAGCACGGCG
TGGCACGGGATCAGAGAGGGAAGTAAATGAGCCTGGGAGCCAGCAGCAAG
ATAACGTGGCGGACGGGGGGCTTCAGGGAGAAGAGGAAGCAAGCGATAAG
GATTCCAGTACGTTGTCGCGATCGCGGGATGTTCAATGGAGGCCGAGCTC
CTCGCCCTCGTTGTTGCCTCGGCGGGCGTGGCAGGATGGCCTTCCGGGCA
AGATTTCGACGTTAACACTGCAGCTTTCAGGTACCATAGACGTCATCGGG
CGGGTGGGACGGCAAGCTGTATTCTGGCATGTCATCGAACTCGTTCGTTC
GCTGCGTGAGCTGGACTTCCCAGAAGATGTAGACGTCGTATCGTCTGCTG
CCATCAGTCAAACGGGCTTCCTCAGGAGTGTAGAACGAGAAGATCTGCAG
GTCGTCTCTGGAAAAGACAATTTAGTGGTCCTTCGCAGCATGCCCGGTGG
CTGTCCAATCGCTGGTCCCGCGTCCCGCCAAGGCGTCTTGATGGGTCCTG
TTCGTGGTGCCATGTCTGCACCAGAATCCGGCGGAGACACGGCTTTCGCG
GCCGCGTCGGAACAATACTTCACCCCGCCGTGGCGATGCATAGAGGAAAG
GTACGACCCCACTATGCCACAGCGAGTCGGGACCGGTTGGCGGTCGAGTA
CTCGCTCAAGTGCGGGCCCTCGCCGCAGCCGCTCCCGCGCGCTGATGGAG
CTGGCAGAAAGGAAGAAGGAGGGGGATGCCATATGCACTATCGTGCTGGC
ATTATCCAGGACTCCGGGAAACGATGCAATGTGGAACCTTATGCAGCGAG
TAGCGTCAGAGCGGGGAGTGGACGCCGGCGACGGCGGTTTCCATGGGGAG
CAGGTAGAGGCGCTTGTCGGAAGGCACCGAGAACAGGCGCAGGGCTTGAT
CTACCGTGGGCACGATGCGGCCATGTGGAGTCGCGCGAAACAAGCTCTAA
AGTTGTATGGCCAGGCGCATGCCCTTCGCCCCGCGGAGCCCCTGCCGCTC
CTGTGCCTAGGCACACATATCATGCGTATGGTAACGGTCATGGAGACTAT
GGTGGAGAATGATGGAGTGTGCGTCCTCCAGGCACTTGCTTGTCTTCACC
GCTATGCTGAGCTGCGCAGATCTCATCCCACCAACGCGAGCAGCGTCACG
GGTGGTACCGCAGGCAACAGTGCCCGTTCAGCGCCCGCGGTGCCAGAGGC
AGTGCTGGAACAAGAGATTTGGTACAATCTGGGCCGGGGATACCACCAGG
TGGGGCTGGATGAGCTGGCCATGGAGTATTACAATAGAGCTTTGCGAGTG
GAGGATGAGCGCGGGAGGGAGTTGCAGAACTGGCACGGGGGTGGTGGAGT
AACGAAGGAAACCGCCCATAACTTGTGCACTTTGTATAAGAGTTGCGGAT
CCACGGCGATGGCTCTCGGTATCATGCACAAGTATCTTGCCGTGCCATGA
GTGTACGGTGAGACAGATAATGTGGCGGAGTCAGTGCTGTTTCTTCGACA
GGTGACCCAGTCATCGCACCCCCGTCGTTATCTAGCGGGTGTGCAACTGG
GCGCGGCGTATGCAGCGCAAGGCCAGCACGAGCTGGCGTCGGCATCTTAT
AGTGCTGTAATAAAGGAATGCCCTCAGCACGCGGCGGCTCTAGCTGGCTT
GGCAGAGGCTGCCTACTGGAGTGGAAAGCGAGTAGCTCCGAAGGCGTTGT
TGGAGTTGAACTGCGCTATCGAGAAGTTTTCTGGGACTTGGGCGGGGGAA
CAACCGCAGCCACCGGTGGAGGACGATGATGAAGGGGAGGAAGCCTACGG
ATTTCAGCGATTGCAGCTTCTTTTACAATGGGCCACGCTCAACCGGATGA
CCGGAAACTCCGCAAATTTCGCCAGCGTTGCGCTTCCCCTCGTCAGCGTC
GCTCTCGGTCAGATGGACCAACGCGCCAAATTCGACATGGAGCAGACCGT
CGCCGCCCACGCGTCACATGCAGCAAGAGAACGAGCACGGCGTGGCACGG
GATCAGAGAGGGAAGTAAATGAGCCTGGGAGCCAGCAGCAAGATAACGTG
GCGGACGGGGGGCTTCAGGGAGAAGAGGAAGCAAGCGATAAGGATTCCAG
TACGTTGTCGCGATCGCGGGATGTTCAATGGAGGCCGAGCTCCTCGCCCT
CGTTGTTGCCTCGGCGGGCGTGGCAGGATGGCCTTCCGGGCAAGATTTCG
ACGTTAACACTGCAGCTTTCAGGTACCATAGACGTCATCGGGCGGGTGGG
ACGGCAAGCTGTATTCTGGCATGTCATCGAACTCGTTCGTTCGCTGCGTG
AGCTGGACTTCCCAGAAGATGTAGACGTCGTATCGTCTGCTGCCATCAGT
CAAACGGGCTTCCTCAGGAGTGTAGAACGAGAAGATCTGCAGGTCGTCTC
TGGAAAAGACAATTTAGTGGTCCTTCGCAGCATGCCCGGTGGCTGTCCAA
TCGCTGGTCCCGCGTCCCGCCAAGGCGTCTTGATGGGTCCTGTTCGTGGT
GCCATGTCTGCACCAGAATCCGGCGGAGACACGGCTTTCGCGGCCGCGTC
GGAACAATACTTCACCCCGCCGTGGCGATGCATAGAGGAAAGGTACGACC
CCACTATGCCACAGCGAGTCGGGACCGGTTGGCGGTCGAGTACTCGCTCA
AGTGCGGGCCCTCGCCGCAGCCGCTCCCGCGCGCTGATGGAGCTGGCAGA
AAGGAAGAAGGAGGGGGATGCCATATGCACTATCGTGCTGGCATTATCCA
GGACTCCGGGAAACGATGCAATGTGGAACCTTATGCAGCGAGTAGCGTCA
GAGCGGGGAGTGGACGCCGGCGACGGCGGTTTCCATGGGGAGCAGGTAGA
GGCGCTTGTCGGAAGGCACCGAGAACAGGCGCAGGGCTTGATCTACCGTG
GGCACGATGCGGCCATGTGGAGTCGCGCGAAACAAGCTCTAAAGTTGTAT
GGCCAGGCGCATGCCCTTCGCCCCGCGGAGCCCCTGCCGCTCCTGTGCCT
AGGCACACATATCATGCGTATGGTAACGGTCATGGAGACTATGGTGGAGA
ATGATGGAGTGTGCGTCCTCCAGGCACTTGCTTGTCTTCACCGCTATGCT
GAGCTGCGCAGATCTCATCCCACCAACGCGAGCAGCGTCACGGGTGGTAC
CGCAGGCAACAGTGCCCGTTCAGCGCCCGCGGTGCCAGAGGCAGTGCTGG
AACAAGAGATTTGGTACAATCTGGGCCGGGGATACCACCAGGTGGGGCTG
GATGAGCTGGCCATGGAGTATTACAATAGAGCTTTGCGAGTGGAGGATGA
GCGCGGGAGGGAGTTGCAGAACTGGCACGGGGGTGGTGGAGTAACGAAGG
AAACCGCCCATAACTTGTGCACTTTGTATAAGAGTTGCGGATCCACGGCG
ATGGCTCTCGGTATCATGCACAAGTATCTTGCCGTGCCATGA back to top
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