prot_H-paniculata_contig19.4756.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig19.4756.1
Unique Name	prot_H-paniculata_contig19.4756.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	313

Homology

[Close]

BLAST of mRNA_H-paniculata_contig19.4756.1 vs. uniprot
Match: A0A6H5JDM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDM8_9PHAE)

HSP 1 Score: 217 bits (552), Expect = 2.300e-64
Identity = 141/340 (41.47%), Postives = 174/340 (51.18%), Query Frame = 0

Query:    1 MISASPYPPFSRNFDDEHEYVDAAAKTMSSTADAALAFNSNNTNMFDSHRLPPTLRWKRSLAQHHRNNQPDQDMVPFTVK--TLIVGFQGGGASFAHTLLGLGNNNSEENANDDWVGTLVLP---------AGCVGGGGNSLEATDPYNATCNIFRK-------------KGG-----------------------------------------------------EGGKEDIAVALCSYRVPPAAAHAWARVLLDNVASDVVVGLTSVVVEPGRSNGWEGATLLATSQAEERPDCVEMSRGFQPLPTPSMVTGPAAALVSHCQRHGRAAMCFAVAKRPG 263
            MI+A+ YP FSRNF+DE +Y DAA         AA   NS  + +    +L P LRWKR             +     VK  TL+VGF+GGGASFA    GL    +EE    DW+GT+VLP         A   GG G+SL+ TDP N+ CNIFRK             KG                                                      EG   D+ V LC YRVPP  A +WA+ LL  + ++VVV LT+V  EPGRS GW GA LLAT++AEER DC++MS GFQPL TP+M++G  AALVS+CQRHG+AAMCFA A+ PG
Sbjct:    1 MIAATRYPAFSRNFEDEQDYADAAVS-------AARKANSLPSGV----KLAPILRWKRRQXXXXXXXXXXGEASSHKVKCKTLVVGFEGGGASFAQKCFGL---TAEE---ADWIGTVVLPGAPCSGADAASTTGGIGDSLDPTDPLNSACNIFRKTWAGKDNRGWNCDKGEGCGEAEPLSNGSNANGNPPGXXXXXXXXXXXXXXXXXXXXXXXXXXVASKDFHEGSGSDVLVVLCGYRVPPRQADSWAKALLGGIEAEVVVALTTVEAEPGRSEGWRGARLLATAEAEEREDCLKMSVGFQPLRTPTMLSGAPAALVSYCQRHGQAAMCFAAAESPG 323

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig19.4756.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig19.4756.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5JDM8_9PHAE	2.300e-64	41.47	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37227	FAMILY NOT NAMED	coord: 112..260

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig19	contig	H-paniculata_contig19:46317..50837 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig19.4756.1	mRNA_H-paniculata_contig19.4756.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig19 45878..50886 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig19.4756.1 ID=prot_H-paniculata_contig19.4756.1|Name=mRNA_H-paniculata_contig19.4756.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=313bp
MISASPYPPFSRNFDDEHEYVDAAAKTMSSTADAALAFNSNNTNMFDSHR
LPPTLRWKRSLAQHHRNNQPDQDMVPFTVKTLIVGFQGGGASFAHTLLGL
GNNNSEENANDDWVGTLVLPAGCVGGGGNSLEATDPYNATCNIFRKKGGE
GGKEDIAVALCSYRVPPAAAHAWARVLLDNVASDVVVGLTSVVVEPGRSN
GWEGATLLATSQAEERPDCVEMSRGFQPLPTPSMVTGPAAALVSHCQRHG
RAAMCFAVAKRPGVSQEVSGAAFGCTVKALRLVAGDALANPADNSGVNVG
DEMAGIRGNLYV*