prot_H-paniculata_contig19.4755.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19.4755.1
Unique Nameprot_H-paniculata_contig19.4755.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length517
Homology
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BLAST of mRNA_H-paniculata_contig19.4755.1 vs. uniprot
Match: A0A6H5JBU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBU0_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 2.930e-20
Identity = 118/448 (26.34%), Postives = 181/448 (40.40%), Query Frame = 0 
Query:   17 TLASTLVGLENQYSGVAAL-----DKVPPEEGTNLRETDDKAATTGISWASFSGRPQSEDRDFAIAAAAACHCIDVDETGEFPSDESLGVFELGPSEVPPGGFKITAGQISL-LFRQPQLRGGIGEDLRLPGDDDMGDLSHVVNVSLSLGVPREAISARLAAAAGAFAAMTMAVRADPGD----LSAAPEESEVRSPGFANDADGSYILHEFALATEWAAGTPTVLLGLTMAYGNDGDWVKVNISVPLMHSESTADAIQIPYGANADGSVRVRGSSSATMMVVKGSFNWVSEAELWTLLDGPAVVADARVFDAHAVDSNTEP----LLHATLCKRATGSETAAPRTRPQPPASRMDELRATLTPFETQQPCSRRTSTDIDEFTQALQEKSGCGVEGHLNTNPSTDSVVVVEIGDPEWTR-----ETGRGMDVVLSLPRLLNWQPGQWK 445
            T+A   V +  ++S VA +     D + P++ T+       AAT G +      R    D       AAA HC+ VDE G FP++ +LG+FE  P  +  G  ++T   +      Q Q  GG   D   P    +  +  VV    + G  RE          G  +          G+     +AA   +   +P  A  A  +          E  A  P + + +  A+G  GDW   + ++PL     T+D                 G+  ++ ++   +F+W    ++W+ LD P + AD RV+   +  +  +     LL  TLCKRA+G    + R       +    ++A LTP+  + P     +  I                     +PS  SVVV EI D EW R     E+GRGMD V +LPRL  W+PG WK
Sbjct:    5 TIAILFVQVLARFSCVATILEARRDALSPDDATST-----VAATAGGTGRVIQLRATESD-----VKAAARHCVAVDEVGRFPANHALGLFETEPGRLVLGTPRVTDASVEFSALPQRQNAGGSNSD-ETPATGTI--VFKVVLEVDNTGRWREG-------GGGTTSGRRTGEPVPTGEGMEMTAAAATAATAENPAEAQMAISALAAWNLMTTRETPAMLPMIRVEVGAAFGYHGDWYTASKTIPL-----TSD-----------------GTGHSSALLSSATFDWQPAPDVWSKLDEP-MAADVRVYGTASTPTEEQEAGLLLLRGTLCKRASGFGGRSTRDE-----TTQGTMKAALTPYAERLPAVAAEAVAI---------------------SPSRPSVVVSEIRDEEWWRAREEEESGRGMDAVDALPRLPRWKPGDWK 383
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19.4755.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JBU0_9PHAE2.930e-2026.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 446..466
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..516
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.749

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19contigH-paniculata_contig19:42576..44438 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19.4755.1mRNA_H-paniculata_contig19.4755.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19 42552..45217 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19.4755.1 ID=prot_H-paniculata_contig19.4755.1|Name=mRNA_H-paniculata_contig19.4755.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=517bp
MRARWLASFSVAPLFFTLASTLVGLENQYSGVAALDKVPPEEGTNLRETD
DKAATTGISWASFSGRPQSEDRDFAIAAAAACHCIDVDETGEFPSDESLG
VFELGPSEVPPGGFKITAGQISLLFRQPQLRGGIGEDLRLPGDDDMGDLS
HVVNVSLSLGVPREAISARLAAAAGAFAAMTMAVRADPGDLSAAPEESEV
RSPGFANDADGSYILHEFALATEWAAGTPTVLLGLTMAYGNDGDWVKVNI
SVPLMHSESTADAIQIPYGANADGSVRVRGSSSATMMVVKGSFNWVSEAE
LWTLLDGPAVVADARVFDAHAVDSNTEPLLHATLCKRATGSETAAPRTRP
QPPASRMDELRATLTPFETQQPCSRRTSTDIDEFTQALQEKSGCGVEGHL
NTNPSTDSVVVVEIGDPEWTRETGRGMDVVLSLPRLLNWQPGQWKERRLK
IRRQEEEQERRQAYRRDKSRAEVGSTGSGGRGGGDGGDNVVSRFVKRVMS
AVRGRWRNFRKQKNNY*
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