mRNA_H-paniculata_contig18991.4750.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig18991.4750.1 vs. uniprot
Match: A0A6H5JZF2_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZF2_9PHAE) HSP 1 Score: 167 bits (424), Expect = 2.630e-44 Identity = 81/106 (76.42%), Postives = 90/106 (84.91%), Query Frame = 2
Query: 506 VRWDELTDVEFMVNGSRCTIYTAFYGNIPVVAKVMRKDVQEKE---QELXXXMSLLMRLRHPNIVKLIGVGVHPEKFLLIERLDGGTLAQRCGNALNIRDRRRRFR 814
VRW++LT VEFMVNGSRCTIYTAFYG PVV KVMRKDVQ+++ QEL M LLMRLRHPNIV+L+G G PE FLLIERLDGGTLAQRCGNA+ +RDRRRRFR
Sbjct: 279 VRWEQLTTVEFMVNGSRCTIYTAFYGTTPVVVKVMRKDVQDRDTVRQELELEMGLLMRLRHPNIVRLLGAGTRPEPFLLIERLDGGTLAQRCGNAVKVRDRRRRFR 384
BLAST of mRNA_H-paniculata_contig18991.4750.1 vs. uniprot
Match: A0A836C8Q0_9STRA (Serine/threonine-protein kinase CTR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Q0_9STRA) HSP 1 Score: 158 bits (399), Expect = 5.570e-41 Identity = 76/113 (67.26%), Postives = 91/113 (80.53%), Query Frame = 2
Query: 506 VRWDELTDVEFMVNGSRCTIYTAFYGNIPVVAKVMRKDVQEKEQ---ELXXXMSLLMRLRHPNIVKLIGVGVHPEKFLLIERLDGGTLAQRCGNALNIRDRRRRFRQKQSPFS 835
+RWD L D EF+VNGSRCTIYTAFY N+PV K++RKD+ +K+ EL +LMRL HPNIVKLIG G PE+F++IERLDGGTLAQRCG+ALNIRDRRRRFR K +PF+
Sbjct: 192 MRWDSLQDAEFLVNGSRCTIYTAFYKNLPVAVKLVRKDIPDKKTVYGELNMETDILMRLHHPNIVKLIGAGTQPERFMVIERLDGGTLAQRCGSALNIRDRRRRFRTK-TPFT 303
BLAST of mRNA_H-paniculata_contig18991.4750.1 vs. uniprot
Match: A0A835Z8J1_9STRA (Serine/threonine-protein kinase CTR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J1_9STRA) HSP 1 Score: 134 bits (338), Expect = 2.090e-32 Identity = 66/113 (58.41%), Postives = 87/113 (76.99%), Query Frame = 2
Query: 506 VRWDELTDVEFMVNGSRCTIYTAFYGNIPVVAKVMRKDVQEK---EQELXXXMSLLMRLRHPNIVKLIGVGVHPEKFLLIERLDGGTLAQRCGNALNIRDRRRRFRQKQSPFS 835
V+W EL++VEF+VNGSRCTIYTA Y + V K++RKD + +EL M LLMRL + NIV+L+G G+ PE+FL+IERLDGGTL+QRCG+ +RDRRRRF++KQ PF+
Sbjct: 234 VQWSELSEVEFLVNGSRCTIYTATYNHQACVVKLLRKDAVDAAIVRRELELEMELLMRLNNENIVRLLGAGIEPERFLIIERLDGGTLSQRCGSGGAVRDRRRRFKRKQ-PFN 345
BLAST of mRNA_H-paniculata_contig18991.4750.1 vs. uniprot
Match: A0A6H5JUQ3_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUQ3_9PHAE) HSP 1 Score: 127 bits (319), Expect = 1.030e-29 Identity = 65/113 (57.52%), Postives = 82/113 (72.57%), Query Frame = 2
Query: 506 VRWDELTDVEFMVNGSRCTIYTAFYGNIPVVAKVMRKDVQEK---EQELXXXMSLLMRLRHPNIVKLIGVGVHPEKFLLIERLDGGTLAQRCGNALNIRDRRRRFRQKQSPFS 835
V W EL DV+F+VNGSRCTIYTA Y + VV K+MRKDVQ+ EL ++LL R+RH NIV+L+G G PE+FL+I RLDGGTL+QRC + +RDRR RF+ + PFS
Sbjct: 253 VAWAELEDVDFLVNGSRCTIYTAVYKDQQVVVKLMRKDVQDAALVRDELELELALLRRVRHENIVRLLGAGKEPERFLIIARLDGGTLSQRCDHGSRLRDRRGRFKTGK-PFS 364
BLAST of mRNA_H-paniculata_contig18991.4750.1 vs. uniprot
Match: A0A835Z8G5_9STRA (Serine/threonine-protein kinase CTR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G5_9STRA) HSP 1 Score: 127 bits (319), Expect = 1.360e-29 Identity = 70/132 (53.03%), Postives = 87/132 (65.91%), Query Frame = 2
Query: 506 VRWDELTDVEFMVNGSRCTIYTAFYGNIPVVAKVMRKDVQEK---EQELXXXMSLLMR-------------------LRHPNIVKLIGVGVHPEKFLLIERLDGGTLAQRCGNALNIRDRRRRFRQKQSPFS 835
V+W EL+DVEF+VNGSRCTIYTA Y V K++RKDV + +EL M LLMR L+H NIV+L+G G PE+FL+IERLDGGTL+QRCG+ +RDRRRRF++KQ PFS
Sbjct: 277 VKWAELSDVEFLVNGSRCTIYTATYREAACVVKLLRKDVPDAALVRRELELEMELLMRVLVTLXXXXXXXXXXXXXXLKHDNIVRLLGAGDDPERFLVIERLDGGTLSQRCGSGGAVRDRRRRFKRKQ-PFS 407
BLAST of mRNA_H-paniculata_contig18991.4750.1 vs. uniprot
Match: A0A6V1S4W8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S4W8_HETAK) HSP 1 Score: 94.0 bits (232), Expect = 5.850e-18 Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = 2
Query: 512 WDELTDVEFMVNGSRCTIYTAFYGNIPVVAKVM---RKDVQEKEQELXXXMSLLMRLRHPNIVKLIGVGVHPEKFLLIERLDGGTLAQRCGNA 781
W L D F+ NG CTIYTA + ++PVV K++ R D++ +L M L+RLRHPN+V++ G G +PE+F+++ERLDGGTL + G A
Sbjct: 224 WALLDDARFLANGGFCTIYTAQFKHLPVVVKMLKDDRLDMEAARADLEAEMHFLLRLRHPNVVEIYGAGFNPERFIVLERLDGGTLTEVGGGA 316
BLAST of mRNA_H-paniculata_contig18991.4750.1 vs. uniprot
Match: A0A1Z5KHW2_FISSO (Protein kinase domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KHW2_FISSO) HSP 1 Score: 91.3 bits (225), Expect = 4.110e-17 Identity = 49/115 (42.61%), Postives = 73/115 (63.48%), Query Frame = 2
Query: 506 VRWDELTDVEFMVNGSRCTIYTAFYGNIPVVAKVMRKDVQEKE---QELXXXMSLLMRLRHPNIVKLIGVGVHPE--KFLLIERLDGGTLAQRCGNALNIRDRRRRF-RQKQSPF 832
++W +L +VE++ +G I+TA + + PVV K ++ + Q+ E+ + + RL+HPNIV L+G G +F+++ERLDGGTLAQ G IRDRRRRF R+KQ PF
Sbjct: 361 LQWRQLQNVEYLTDGGNSWIHTAVFRDKPVVVKTLKPECQDVVVAINEMEGELDIHSRLQHPNIVDLLGAGTTTRGVRFIVLERLDGGTLAQMLGYDTRIRDRRRRFWRKKQFPF 475
BLAST of mRNA_H-paniculata_contig18991.4750.1 vs. uniprot
Match: A0A1E7FU65_9STRA (Kinase-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FU65_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 4.320e-16 Identity = 46/112 (41.07%), Postives = 70/112 (62.50%), Query Frame = 2
Query: 506 VRWDELTDVEFMVNGSRCTIYTAFYGNIPVVAKVMRKDVQEKE---QELXXXMSLLMRLRHPNIVKLIGVGVHPEK--FLLIERLDGGTLAQRCGNALNIRDRRRRFRQKQS 826
++W +L +VE++ +G I+TA + PVV K +R + Q+ E+ +++ RL HPN+V +IG G +K F+++ERLDGGTL Q G IRDRRRRF +K+S
Sbjct: 492 LQWRQLLNVEYLTDGGNSWIHTAIFDGKPVVVKTLRPECQDTALAINEIEAEVAIHARLNHPNVVSVIGAGWTSKKVRFIVLERLDGGTLTQMLGYDTRIRDRRRRFWRKKS 603
BLAST of mRNA_H-paniculata_contig18991.4750.1 vs. uniprot
Match: A0A7S3DX07_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DX07_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 3.270e-15 Identity = 47/115 (40.87%), Postives = 70/115 (60.87%), Query Frame = 2
Query: 506 VRWDELTDVEFMVNGSRCTIYTAFYGNIPVVAKVMRKDVQEKE---QELXXXMSLLMRLRHPNIVKLIGVGVHPEK--FLLIERLDGGTLAQRCGNALNIRDRRRRF-RQKQSPF 832
++W +L +VE++ +G I+TA + PVV K ++ + Q+ E+ + + +L HPNIV LIG G +K F+++ERLDGGTL Q G IRDRRRRF ++KQ F
Sbjct: 410 LQWRQLQNVEYLTDGGNSWIHTAVFQGRPVVVKTLKPECQDVALAINEIEAELEVHSKLNHPNIVGLIGAGTTSKKVRFIILERLDGGTLTQMLGYDTRIRDRRRRFWKRKQFSF 524
BLAST of mRNA_H-paniculata_contig18991.4750.1 vs. uniprot
Match: A0A7S4EJ08_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EJ08_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 3.650e-15 Identity = 46/115 (40.00%), Postives = 71/115 (61.74%), Query Frame = 2
Query: 506 VRWDELTDVEFMVNGSRCTIYTAFYGNIPVVAKVMRKDVQEKE---QELXXXMSLLMRLRHPNIVKLIGVGVHPEK--FLLIERLDGGTLAQRCGNALNIRDRRRRF-RQKQSPF 832
++W +L +VE++ +G I+TA + PVV K +R + Q+ E+ + + RL HPN+V LIG G +K F+++ERLDGGTL Q+ G IRDRR+RF + K+ P+
Sbjct: 504 LQWCQLHNVEYLTDGGTSWIHTAIFDGKPVVVKTLRPECQDTSIAINEIEAEVGVHSRLNHPNVVTLIGAGWTSKKVRFIVLERLDGGTLTQKLGYNNRIRDRRKRFFKDKRIPY 618 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18991.4750.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig18991.4750.1 >prot_H-paniculata_contig18991.4750.1 ID=prot_H-paniculata_contig18991.4750.1|Name=mRNA_H-paniculata_contig18991.4750.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=100bp MVNGSRCTIYTAFYGNIPVVAKVMRKDVQEKEQELELEMSLLMRLRHPNIback to top mRNA from alignment at H-paniculata_contig18991:2471..4676+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig18991.4750.1 ID=mRNA_H-paniculata_contig18991.4750.1|Name=mRNA_H-paniculata_contig18991.4750.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2206bp|location=Sequence derived from alignment at H-paniculata_contig18991:2471..4676+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig18991:2471..4676+ >mRNA_H-paniculata_contig18991.4750.1 ID=mRNA_H-paniculata_contig18991.4750.1|Name=mRNA_H-paniculata_contig18991.4750.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=600bp|location=Sequence derived from alignment at H-paniculata_contig18991:2471..4676+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |