prot_H-paniculata_contig1899.4749.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig1899.4749.1
Unique Name	prot_H-paniculata_contig1899.4749.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	153

Homology

[Close]

BLAST of mRNA_H-paniculata_contig1899.4749.1 vs. uniprot
Match: D7FVL6_ECTSI (Hypothetical leucine rich repeat and GCG domain-containing receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL6_ECTSI)

HSP 1 Score: 132 bits (332), Expect = 7.110e-33
Identity = 69/143 (48.25%), Postives = 88/143 (61.54%), Query Frame = 0

Query:   10 PLLYAALSYTDVEYTGLEALYNATNGHQWTASGGWRDSTLGVCNWYGVTCDDKSQNVTSLSLSNNNLAGDLSSASELSYMASLEQLDLSSNGLYGAVPVVLGLMPXXXXXXXXXXXXXXFPSTWGSGASXXXXXXXXXXKISG 152
            P  +A+    +V+  GLEALY ATNG  W  S GW D +LGVC+WYGVTCD +  NVT +SLSNN L GD+S A++L+ + SLE++DLS N L G VP+ LG+MP              FP+ WGSGAS          +ISG
Sbjct:   26 PTAFASAYTEEVQIAGLEALYYATNGQDWANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQLSGPVPLNLGMMPNMETLDLSGNELSYFPAAWGSGASMLRHLSLQNNRISG 168

[Close]

BLAST of mRNA_H-paniculata_contig1899.4749.1 vs. uniprot
Match: D7FVL7_ECTSI (Hypothetical leucine rich repeat and GCG domain-containing receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL7_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 2.500e-30
Identity = 66/136 (48.53%), Postives = 82/136 (60.29%), Query Frame = 0

Query:   17 SYTDVEYTGLEALYNATNGHQWTASGGWRDSTLGVCNWYGVTCDDKSQNVTSLSLSNNNLAGDLSSASELSYMASLEQLDLSSNGLYGAVPVVLGLMPXXXXXXXXXXXXXXFPSTWGSGASXXXXXXXXXXKISG 152
            SY + +  GLEALYNAT G QW +S GWRD+TLGVC+WYGV CD   +NVT L+L+ N LAG+LS A EL  + SL  +DLS N L G V +  GLMP              FP++WG+ AS          +ISG
Sbjct:   29 SYLETQQVGLEALYNATGGEQWASSSGWRDATLGVCDWYGVVCDSDGRNVTGLALAGNGLAGNLSEAVELFDVLSLISIDLSDNELVGPVALGFGLMPDLEVLDLSRNDLSYFPTSWGTEASSLRHLSLQQNEISG 164

[Close]

BLAST of mRNA_H-paniculata_contig1899.4749.1 vs. uniprot
Match: A0A7S4JRB2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4JRB2_9EUKA)

HSP 1 Score: 72.4 bits (176), Expect = 6.290e-12
Identity = 38/93 (40.86%), Postives = 59/93 (63.44%), Query Frame = 0

Query:   20 DVEYTGLEALYNATNGHQWTASGGWRDSTLGVCNWYGVTCDDKSQNVTSLSLSNNNLAGDLSSASELSYMASLEQLDLSSN-GLYGAVPVVLG 111
            D  Y GL   YNATNG  WT    W D+++ VC+WYG+TC + +Q ++ ++L+NNNL G + S + L  +  ++ L+L +N GL G +P  +G
Sbjct:  550 DFLYPGLIEFYNATNGDLWTFKDDWLDTSVTVCDWYGITCLNGTQKISRITLNNNNLNGTIPS-NFLVELVDVQGLNLGNNAGLVGTIPTEVG 641

[Close]

BLAST of mRNA_H-paniculata_contig1899.4749.1 vs. uniprot
Match: A0A7S2K7V6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K7V6_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 3.550e-10
Identity = 34/89 (38.20%), Postives = 54/89 (60.67%), Query Frame = 0

Query:   26 LEALYNATNGHQWT-ASGGWRDSTLGVCNWYGVTCDDKSQNVTSLSLSNNNLAGDLSSASELSYMASLEQLDLSSNGLYGAVPVVLGLM 113
            L   +++TNG  W  A  GW +  +  CNW G+TCD+ S  VT +SLSN NL G + S+  + +++ L+ L L SN +  ++P  +GL+
Sbjct:  130 LTRFFHSTNGDTWGGARFGWLNPAIPECNWNGITCDETSNRVTDISLSNQNLTGFIDSS--IGFLSDLKTLQLMSNNIASSIPSEIGLL 216

[Close]

BLAST of mRNA_H-paniculata_contig1899.4749.1 vs. uniprot
Match: UPI001F4608E0 (T9SS type A sorting domain-containing protein n=1 Tax=Portibacter sp. 10MBP4-2-1 TaxID=2898660 RepID=UPI001F4608E0)

HSP 1 Score: 67.4 bits (163), Expect = 3.810e-10
Identity = 42/86 (48.84%), Postives = 49/86 (56.98%), Query Frame = 0

Query:   22 EYTGLEALYNATNGHQWTASGGWRDSTLGVCNWYGVTCDDKSQNVTSLSLSNNNLAGDLSSASELSYMASLEQLDLSSNGLYGAVP 107
            +Y  L AL+NAT+G  WT +GGW  S   VCNWYGV C      V SLSLSNNNL G L    EL  M  LE+     N + G +P
Sbjct:   39 DYDALMALFNATDGSNWTNNGGW-GSDCDVCNWYGVGCSGNE--VWSLSLSNNNLVGIL--PDELGQMQYLERFHAWDNQITGGLP 119

[Close]

BLAST of mRNA_H-paniculata_contig1899.4749.1 vs. uniprot
Match: UPI00036B865C (T9SS type A sorting domain-containing protein n=1 Tax=Lewinella persica TaxID=70998 RepID=UPI00036B865C)

HSP 1 Score: 66.2 bits (160), Expect = 9.440e-10
Identity = 39/94 (41.49%), Postives = 53/94 (56.38%), Query Frame = 0

Query:   19 TDVEYTGLEALYNATNGHQWTASGGWRDSTLGVCNWYGVTCDDKSQNVTSLSLSNNNLAGDLSSASELSYMASLEQLDLSSNGLYGAVPVVLGL 112
            T  +Y  LEA+YNATNG  WT +  W  +    C W+GVTCD   + V  L L NNNL G L   +EL+ +  +E L  ++N   G VP ++ L
Sbjct:  246 TTPDYNALEAIYNATNGDNWTDNTNWL-TDCDYCTWFGVTCDVNGR-VRRLELPNNNLIGTL--PAELADLTEVEYLRFNNNSFTGGVPNLIAL 335

[Close]

BLAST of mRNA_H-paniculata_contig1899.4749.1 vs. uniprot
Match: A0A357KQ35_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A357KQ35_9GAMM)

HSP 1 Score: 64.3 bits (155), Expect = 4.210e-9
Identity = 39/102 (38.24%), Postives = 54/102 (52.94%), Query Frame = 0

Query:   14 AALSYTDVEYTGLEALYNATNGHQWTASGGWRDST----LGVCNWYGVTCDDKSQNVTSLSLSNNNLAGDLSSASELSYMASLEQLDLSSNGLYGAVPVVLG 111
            AA++    E T L  ++ ATNG+ W+ + GW  +     +G   W GV CD     VT L L N NL G+L      + + +L QLDL SN L GA+P  +G
Sbjct:   28 AAVADLASEKTALLEIFTATNGNTWSTNNGWGSANSICGVGTSGWVGVACDTTGDTVTGLDLGNRNLVGELPDG-VFAGLPTLNQLDLRSNHLTGALPGSIG 128

[Close]

BLAST of mRNA_H-paniculata_contig1899.4749.1 vs. uniprot
Match: A0A7S2U8K5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U8K5_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 2.290e-8
Identity = 34/92 (36.96%), Postives = 51/92 (55.43%), Query Frame = 0

Query:   19 TDVEYTGLEALYNATNGHQWTASGGWRDSTLGVCNWYGVTCDDKSQNVTSLSLSNNNLAGDLSSASELSYMASLEQLDLSSNGLYGAVPVVL 110
            T  +   L+A +  TNG QW     W  +++GVC W GV CD+    V +++LS NNLAG L    ++  ++ L  LDL  N + G +P+ L
Sbjct:   45 TSSDDCALQAFFITTNGCQWDDRTNWLSTSVGVCEWNGVNCDNS--RVNTINLSRNNLAGSL--PFQIGGLSDLGSLDLDGNSITGTLPIEL 132

[Close]

BLAST of mRNA_H-paniculata_contig1899.4749.1 vs. uniprot
Match: A0A0K0XZP5_9GAMM (Uncharacterized protein n=1 Tax=Wenzhouxiangella marina TaxID=1579979 RepID=A0A0K0XZP5_9GAMM)

HSP 1 Score: 61.2 bits (147), Expect = 4.650e-8
Identity = 38/96 (39.58%), Postives = 57/96 (59.38%), Query Frame = 0

Query:   14 AALSYTDVEYTG-LEALYNATNGHQWTASGGWRDSTLGVCNWYGVTCDDK--SQNVTSLSLSNNNLAGDLSSASELSYMASLEQLDLSSNGLYGAV 106
            +ALS    E T  L   Y AT G  W  + GW DS++ +C+WYGV C+++  S   + LSL +NNL+G ++    + +M   E+LDLS N L G++
Sbjct:   26 SALSPPPPEPTSALVQFYMATGGEDWKRNDGWLDSSVPMCDWYGVVCNNEFGSPVFSGLSLPDNNLSGSINDLDLIHFM--FERLDLSGNALTGSL 119

[Close]

BLAST of mRNA_H-paniculata_contig1899.4749.1 vs. uniprot
Match: A0A7S2PTL9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PTL9_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 5.640e-8
Identity = 23/44 (52.27%), Postives = 28/44 (63.64%), Query Frame = 0

Query:   17 SYTDVEYTGLEALYNATNGHQWTASGGWRDSTLGVCNWYGVTCD 60
            SY   E + LEALY  TNG  WT + GW + TL  C WYG++CD
Sbjct:   74 SYDKDERSSLEALYEGTNGQNWTNNAGWMNETLDYCEWYGISCD 117

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig1899.4749.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig1899.4749.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FVL6_ECTSI	7.110e-33	48.25	Hypothetical leucine rich repeat and GCG domain-co...	[more]
D7FVL7_ECTSI	2.500e-30	48.53	Hypothetical leucine rich repeat and GCG domain-co...	[more]
A0A7S4JRB2_9EUKA	6.290e-12	40.86	Hypothetical protein (Fragment) n=1 Tax=Paramoeba ...	[more]
A0A7S2K7V6_9STRA	3.550e-10	38.20	Hypothetical protein (Fragment) n=1 Tax=Leptocylin...	[more]
UPI001F4608E0	3.810e-10	48.84	T9SS type A sorting domain-containing protein n=1 ...	[more]
UPI00036B865C	9.440e-10	41.49	T9SS type A sorting domain-containing protein n=1 ...	[more]
A0A357KQ35_9GAMM	4.210e-9	38.24	Uncharacterized protein n=1 Tax=Gammaproteobacteri...	[more]
A0A7S2U8K5_9STRA	2.290e-8	36.96	Hypothetical protein n=1 Tax=Attheya septentrional...	[more]
A0A0K0XZP5_9GAMM	4.650e-8	39.58	Uncharacterized protein n=1 Tax=Wenzhouxiangella m...	[more]
A0A7S2PTL9_9STRA	5.640e-8	52.27	Hypothetical protein (Fragment) n=1 Tax=Skeletonem...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00019	LEURICHRPT	coord: 92..105 score: 52.05 coord: 113..126 score: 50.11
None	No IPR available	PANTHER	PTHR27008	FAMILY NOT NAMED	coord: 40..151
None	No IPR available	PANTHER	PTHR27008:SF300		coord: 40..151
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..12
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 13..17
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 18..152
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..17
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..19 score: 0.673
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 38..151
IPR003591	Leucine-rich repeat, typical subtype	SMART	SM00369	LRR_typ_2	coord: 89..112 e-value: 93.0 score: 5.3 coord: 113..136 e-value: 0.045 score: 22.9
IPR025875	Leucine rich repeat 4	PFAM	PF12799	LRR_4	coord: 64..100 e-value: 3.2E-6 score: 27.4
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 21..152 e-value: 3.5E-29 score: 103.5
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type	PFAM	PF08263	LRRNT_2	coord: 40..60 e-value: 2.3E-4 score: 21.4
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 113..150 e-value: 3.4E-7 score: 29.9

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig1899	contig	H-paniculata_contig1899:8937..9395 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig1899.4749.1	mRNA_H-paniculata_contig1899.4749.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig1899 8934..9395 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig1899.4749.1 ID=prot_H-paniculata_contig1899.4749.1|Name=mRNA_H-paniculata_contig1899.4749.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=153bp
MRLVLCLSFPLLYAALSYTDVEYTGLEALYNATNGHQWTASGGWRDSTLG
VCNWYGVTCDDKSQNVTSLSLSNNNLAGDLSSASELSYMASLEQLDLSSN
GLYGAVPVVLGLMPALKVLDLSGNELSSFPSTWGSGASALRYLSVQGNKI
SG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003591	Leu-rich_rpt_typical-subtyp
IPR025875	Leu-rich_rpt_4
IPR032675	LRR_dom_sf
IPR013210	LRR_N_plant-typ
IPR001611	Leu-rich_rpt