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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Ankyrin repeat-containing domain |
| Ec32 ortholog | Ec-08_005370.1 |
| Exons | 3 |
| Model size | 1151 |
| Cds size | 699 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1896.4737.1 >prot_H-paniculata_contig1896.4737.1 ID=prot_H-paniculata_contig1896.4737.1|Name=mRNA_H-paniculata_contig1896.4737.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=233bp
MFAADTGQAEIVSFLLGVGASTLPPNGSTHTALAAATESGHPKVARELVR
AGADPVFSNGVTALHIAASQVHVDVVRVLLEEGCLEVCVADNGFDICDPA
CHIGVMIANGTEYPLREQRVRQLLARGPAFCARSWLWPVQTAKEDCDIAG
RSASEKVARAGSGRKLVPVPWRMFRHRHKRERNVDIIKILCRYVDLKSGE
PRCENYVKCRESSLSDPSFLDSLPSWSRCSTS* back to topmRNA from alignment at H-paniculata_contig1896:2530..6695+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1896.4737.1 ID=mRNA_H-paniculata_contig1896.4737.1|Name=mRNA_H-paniculata_contig1896.4737.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4166bp|location=Sequence derived from alignment at H-paniculata_contig1896:2530..6695+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTTGATGTTTGCAGCTGATACAGGGCAGGCAGAGATCGTGAGCTTTCTTC
TCGGTGTGGGAGCGAGCACACTGCCACCAAACGGTAGCACGCATACCGCT
TTGGCTGCCGCCACCGAGAGCGGGCACCCGAAGGTCGCGAGAGAGCTGGT
GCGCGCGGGAGCAGACCCGGTGTTCAGTAACGGGGTGACCGCTCTCCACA
TCGCTGCGAGTCAGGTTCATGTGGATGTAGTACGGGTGTTACTGGAAGAG
GGGTGCCTCGAAGTGTGTGTCGCTGATAACGGGTTCGATATTTGCGACCC
TGCTTGTCATATCGGGGTGATGATCGCGAATGGGACTGAATATCCTTTGA
GGGAACAACGTGTGCGACAATTGCTTGCTCGGGGACCCGCGTTCTGCGCC
CGTTCGTGGCTGTGGCCTGTACAAACGGCAAAGGAAGATTGCGATATTGC
TGGCAGGAGCGCGAGCGAGAAGGTCGCGAGGGCTGGTTCGGGACGGAAAT
TAGTGCCCGTTCCCTGGAGGATGTTCCGCCACCGGCATAAGAGGGAACGG
AACGTGGACATTATCAAGATCTTGTGCAGGCGAGTCAGCGTTATTTCAAG
TCTAGCGGGCTACAAAAGTGCGATATTCAACGTATTTAGGCATATACGCG
GGAGTCTCGCTTTGTGAGCTGCACTGCCTATTCGGCATCCTCCGCCACCT
AGCGTTATTGCGTCTGGATAGGCTCGGAGCTCGTGCGTTGTATTCGGTTG
CACATCACCTCGTGTATCCGTGTTTTCTCAGCGACAGGCCTTCAGAGCAG
CTCTGGTAGTCGCTGCGTATTGTGGATTTGTGTTAATCGAGTATATCTCA
AGCTAAGATTTTGACCAAAAGTTCTAGCCGATGCACCATTGCGTTGTATT
TTTGTAATTATGGCGTCGTATGTGAAGGAGCAAACCATCAGAACCAGCGT
TTCTTGACATTATTGACATGATTTATAATATGTTATTTTTATGCTGTTTT
CATTCAAGGACTGGTTACGTTCGATGCGTTTTGTACTTGTGATACTGTAT
GACGTGTACATGCCATTTTTGTTGCGCAACTAGAGCTCTACACAGCCCCG
ACTGAATTTTACCTATCTGACCCGATCATTTATGCGGTTTTTGTGGGTTA
GAAGCCGCCGATCGAATACTCGGAGTACACGCTGATCCTTTGTTCTTCTA
CCAGGAGAGGGTTCTGCTTTGGTGCCTGTAGCGGTGCCGCAGGGTGTGTC
CTACCCATTTAGAGTCAGCCTGTACTTGTGTTCACGTATGCCAACGGTCA
GAAATAGAACAAGATGACACAAGATATGGCACGTTGAGGCGTAAAAAATC
GACTTGTCCTGAATATCGACTAGACACGCAAGAGTGAACAGGTGTCAGAT
CTTTTTCCATTCTTGGAAAATGCCTAAACATTTATACCATCAGTAGAAAG
GCTCTCGACCTGGCGCTCACACCTTTTAAAGGTGCAACCCAAACAGATGA
CGCCAGCGTAAGAGGACGGCGTCTCAAGAGAGGCCATTATTGGTCTTGGT
TGTCTTTTTCCGCCCTTGTTGTTTTGAGTCAGCTTTTCGCCGAGCGATAT
CAACCCTAACATCGGATAACTTCAACGCGCCGTCGTCACTAACGCTCAAA
CTTCGGGTGGTTCATTCTTGATTAATCCGTACCAACTTCCCAGAGATTGA
GCATGCTCTCGTGCTTAAGGTCGCCATTTCGATAGGTTTAACGCATTCGC
GATGGAGGCTTGTATTGGGAAAACGGCCGTGGTGCTCCTGCAAACAGGTG
ATTCTCTTGGCTTCAAAAACTGCTCTCAAGATGACCCGAAAACCGTTACC
GTTCATAATGTAGATCGGACGCATGCCCACGTCATGGTCAATCGATTCCC
CGTGTATCTGTAACGTGTCGCTCTTTGATTGCTACGATTTTTGTATTCAA
GAGGCAAAAGAATAACAGATCCGTTGAGGCGATCGCCTTTTGTGTGTTTC
GCGACTTGTACTTTTCAATCCGTCCAAACCGTCCGTATCGTATCTGGGCG
TGAAAAAGCCGTTCCTTTTCTGTCCCTCGTGCATGTTTGGGTATATGGTT
CCATGCGGGGCAGATACGTTGATCTGAAGAGCGGCGAACCCCGGTGTGAG
AATTACGTGAAGTGCCGCGAGTCATCACTCTCGGATCCATCATTTCTTGA
CTCGCTGCCATCATGGAGTAGGTGTAGCACGTCGTAGCCGCACCGTGCCT
GTTTTGGATTGTCAAGGTAAGACTTCGGCTAACAGCTGGGGATGCCCTCG
GGGCGGATATCCTGGTCTGGAATACAAGTCGCCGTTGTTTTTTTGTTCTG
GAAAACTTGTCGTGATCGGGCTTTTTGTCCGTATTATACGTGTACAATCA
GTCTTGATGCATGCTATCTATAGAGTTTATTGTGGTGTAGGAGCAAGGGA
AAGTAGAAATGGCGCGTACCGAGAAGAGGTACGGTAATCGCCACACGGGT
GAAATGGCGGAGAGATAAAACCGTTTTCGTTTGCCTGCCGAACGATGGCT
CTCAACGAGCTAGATCAGCACGTTGCTGCTTAGTAGCCGCGGCACTCTGC
AATTCGCGACGGCAACACAACTGGGGGAGACAGTATATCCGTTCGGACTG
TGCCAAGTTCTGGATCTCTCGGTGGTTGCTCGTGCTGTGCTTGGATAACA
TCATGTTCTTCAAACTTATTCCGTTGTTATTTGTTATCTGAGATGATCTT
TCGGTGGTTGTCATTTGTATTTAATCGGCGGACAGCGCGTGACTCCCATG
CCACGGCGTTTGTATTTGTGTGTATTTGTGTGTGTGGGAATTGGATAAGG
AATAAGACTACAGCAGGTCAATACGGGTCTGATAAATTAAGATTGCAAGG
TAACCTTCAAGTATTTTCCATCCCATGTTACAATCGTGGAAAAAAATATT
GCCACAGGGGTAAGGCACCCGATGTCGCTGAAGATATCCTTCGTCTATGT
CGTGTGGATGTAGGATTAATTTTGACATCTGAATCCTATCTGTGGTCGGG
GTAAACCTCAATTTTTTTGGTGAAACGGTTGTCTTTCGATTCCAAAACAC
ACGCCGGTAATTCAACCCCTAAAATAAGCAGGATGATTCTACAAAAGCAA
AAAACGGAACAGACGAAATTATTTTCTCGCGGAAAATTACACACATCCAA
CGACTAATTACTCGTCTGAAACTCCTGATCATGCGATGGTACCCCGTAAC
ACCAAAACCCAGACCCCCGACAGGTGTCGAGCTGAAGGAATTGTCTGTGA
CGACTAACATTCATGTATGCACACGGTCTGAGAGCATACAATATAAGCAG
GATCGCAGAGAGAGCAAGCTTCGTTTTGATGAGCGTCAAGGGGTCTCAAT
TGATCGTTTCAGACGATGAATTAGTCCGAGTACGTTTGGATATTACTCGG
CAATACCTATGGCACAGACAGGTATTTTTTCTTCACCTCTCTTACGAATC
TCGCGGGTGTATGATGTTGCTGTAGAAGCCTTTAGGTTTTGGATCAGTGT
ATCACACGCGCGACACGCTGGTGCCTGCCTTTTTATGATGCATTGATTGA
AATATGCCGCTGTGACTCCTCTAGGTTTTCTCTAGGTTCCAGTCATGATT
TAGTTGTGCCGCTGCTGTAATGCTTTTCTTGCCTTGCATTTCCTCTAACA
TTTCCGCCGTTTTATAATACTTGCTCGTTTTCTGGAAAATATTTCAGGTA
TAGTCATCAGCTGGACGGTGCTCTTTCGATCCAGTCCGTAGACTTTCTTC
AGAAAATAGAGTCGCAGCCGGTGGCCGTTGCGTTTGCAGTCGATAATCGT
GTGAAGATTCCGCTGCCAAGTGTCGATTGTGTATTTGTTTTTTTCTAGTA
CCCCTGTATCAAGTGCTTGTAGTGGGGTAGCGAGTTGCGTTTGTTGCTCC
TTGGGTTTTGTTTCGTGGTTCCTACCATAGTGTACTCTTTCTGCGTCCTC
TTCGTCCGTGCGTCTAGCCGGGTCTATCACGAGTACGATACCTATGTACT
CCGCTCTCTGTCCGACATATAGGGCGCACTACGCGAATGATTGATTCCCA
TAGTTACGGTTTGTATGATAGTAGAATATTGAAGTTGTCCACCAGGAAGG
TTCTTGTGGTTAGTGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig1896:2530..6695+ >mRNA_H-paniculata_contig1896.4737.1 ID=mRNA_H-paniculata_contig1896.4737.1|Name=mRNA_H-paniculata_contig1896.4737.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1398bp|location=Sequence derived from alignment at H-paniculata_contig1896:2530..6695+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTTGCAGCTGATACAGGGCAGGCAGAGATCGTGAGCTTTCTTCTCGG
TGTGGGAGCGAGCACACTGCCACCAAACGGTAGCACGCATACCGCTTTGG
CTGCCGCCACCGAGAGCGGGCACCCGAAGGTCGCGAGAGAGCTGGTGCGC
GCGGGAGCAGACCCGGTGTTCAGTAACGGGGTGACCGCTCTCCACATCGC
TGCGAGTCAGGTTCATGTGGATGTAGTACGGGTGTTACTGGAAGAGGGGT
GCCTCGAAGTGTGTGTCGCTGATAACGGGTTCGATATTTGCGACCCTGCT
TGTCATATCGGGGTGATGATCGCGAATGGGACTGAATATCCTTTGAGGGA
ACAACGTGTGCGACAATTGCTTGCTCGGGGACCCGCGTTCTGCGCCCGTT
CGTGGCTGTGGCCTGTACAAACGGCAAAGGAAGATTGCGATATTGCTGGC
AGGAGCGCGAGCGAGAAGGTCGCGAGGGCTGGTTCGGGACGGAAATTAGT
GCCCGTTCCCTGGAGGATGTTCCGCCACCGGCATAAGAGGGAACGGAACG
TGGACATTATCAAGATCTTGTGCAGATGTTTGCAGCTGATACAGGGCAGG
CAGAGATCGTGAGCTTTCTTCTCGGTGTGGGAGCGAGCACACTGCCACCA
AACGGTAGCACGCATACCGCTTTGGCTGCCGCCACCGAGAGCGGGCACCC
GAAGGTCGCGAGAGAGCTGGTGCGCGCGGGAGCAGACCCGGTGTTCAGTA
ACGGGGTGACCGCTCTCCACATCGCTGCGAGTCAGGTTCATGTGGATGTA
GTACGGGTGTTACTGGAAGAGGGGTGCCTCGAAGTGTGTGTCGCTGATAA
CGGGTTCGATATTTGCGACCCTGCTTGTCATATCGGGGTGATGATCGCGA
ATGGGACTGAATATCCTTTGAGGGAACAACGTGTGCGACAATTGCTTGCT
CGGGGACCCGCGTTCTGCGCCCGTTCGTGGCTGTGGCCTGTACAAACGGC
AAAGGAAGATTGCGATATTGCTGGCAGGAGCGCGAGCGAGAAGGTCGCGA
GGGCTGGTTCGGGACGGAAATTAGTGCCCGTTCCCTGGAGGATGTTCCGC
CACCGGCATAAGAGGGAACGGAACGTGGACATTATCAAGATCTTGTGCAG
ATACGTTGATCTGAAGAGCGGCGAACCCCGGTGTGAGAATTACGTGAAGT
GCCGCGAGTCATCACTCTCGGATCCATCATTTCTTGACTCGCTGCCATCA
TGGAGTAGGTGTAGCACGTCGTAGATACGTTGATCTGAAGAGCGGCGAAC
CCCGGTGTGAGAATTACGTGAAGTGCCGCGAGTCATCACTCTCGGATCCA
TCATTTCTTGACTCGCTGCCATCATGGAGTAGGTGTAGCACGTCGTAG back to top
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