mRNA_H-paniculata_contig1896.4736.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1896.4736.1
Unique NamemRNA_H-paniculata_contig1896.4736.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1896.4736.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1896contigH-paniculata_contig1896:1733..2491 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score61.6
Seed ortholog evalue5.8e-07
Seed eggNOG ortholog28377.ENSACAP00000021732
Preferred nameZDHHC13
KEGG koko:K20032
KEGG TC9.B.37.1,9.B.37.3
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000139,GO:0001505,GO:0002791,GO:0002793,GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005794,GO:0005798,GO:0006464,GO:0006497,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006836,GO:0006887,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0007276,GO:0007283,GO:0008021,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009059,GO:0009987,GO:0012505,GO:0015075,GO:0015095,GO:0015318,GO:0015693,GO:0016020,GO:0016079,GO:0016192,GO:0016409,GO:0016417,GO:0016740,GO:0016746,GO:0016747,GO:0017156,GO:0018345,GO:0019538,GO:0019706,GO:0019707,GO:0019953,GO:0022414,GO:0022857,GO:0022890,GO:0023052,GO:0023061,GO:0030001,GO:0030133,GO:0030660,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032504,GO:0032879,GO:0032880,GO:0032940,GO:0034220,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044431,GO:0044433,GO:0044444,GO:0044446,GO:0044456,GO:0044464,GO:0044703,GO:0045055,GO:0045202,GO:0046873,GO:0046903,GO:0046907,GO:0048232,GO:0048489,GO:0048518,GO:0048522,GO:0048609,GO:0050708,GO:0050714,GO:0050789,GO:0050794,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051704,GO:0055085,GO:0065007,GO:0065008,GO:0070201,GO:0070382,GO:0070838,GO:0071704,GO:0072511,GO:0090087,GO:0097458,GO:0097479,GO:0097480,GO:0097708,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098791,GO:0098793,GO:0098805,GO:0098916,GO:0099003,GO:0099503,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:0140096,GO:1901564,GO:1901566,GO:1901576,GO:1903530,GO:1903532,GO:1903830,GO:1904951
EggNOG free text desc.magnesium ion transmembrane transporter activity
EggNOG OGs38DBC@33154,3B9BG@33208,3CW8W@33213,481AQ@7711,48XKG@7742,COG5273@1,KOG0509@2759
EC2.3.1.225
COG Functional cat.S
Best tax levelVertebrata
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko04131
Exons1
Model size761
Cds size729
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929454.7017667-UTR-H-paniculata_contig1896:1732..17621622929454.7017667-UTR-H-paniculata_contig1896:1732..1762Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1896 1733..1762 +
1691480868.5296164-UTR-H-paniculata_contig1896:1732..17621691480868.5296164-UTR-H-paniculata_contig1896:1732..1762Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1896 1733..1762 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929454.7175877-CDS-H-paniculata_contig1896:1762..24911622929454.7175877-CDS-H-paniculata_contig1896:1762..2491Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1896 1763..2491 +
1691480868.5408807-CDS-H-paniculata_contig1896:1762..24911691480868.5408807-CDS-H-paniculata_contig1896:1762..2491Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1896 1763..2491 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1896.4736.1prot_H-paniculata_contig1896.4736.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1896 1763..2491 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1896.4736.1

>prot_H-paniculata_contig1896.4736.1 ID=prot_H-paniculata_contig1896.4736.1|Name=mRNA_H-paniculata_contig1896.4736.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=243bp
MATIYEAIQAVYEGNTRFVTKWLDDNPSIHPDAPELRAQGLTLLYVACLR
GKSGVAKALLRAGADINYGSGIADHLRTPLYAAFCGKHYDLMRQLVDMGV
DISARYDDGSTILHCALFDDSLKVFQKIVGMLGNLDATDRDGDTTLMVYS
MILHPNSSVKHQLEKTKVLLKAGASLSVVGRDGYSPLHGASQVGNHVIVR
MLLDAGASVSARSHHDLTALMHAVKYGQLAVVRLLVQAGADIE
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mRNA from alignment at H-paniculata_contig1896:1733..2491+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1896.4736.1 ID=mRNA_H-paniculata_contig1896.4736.1|Name=mRNA_H-paniculata_contig1896.4736.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=759bp|location=Sequence derived from alignment at H-paniculata_contig1896:1733..2491+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCGACACTGGAGTCCATAACCGGCTAAACGATGGCCACAATTTACGAGGC
AATCCAAGCGGTTTACGAGGGCAATACTAGATTCGTTACCAAATGGCTGG
ATGACAACCCCTCCATCCATCCAGACGCGCCTGAACTTCGAGCACAAGGA
TTGACTCTTCTCTACGTCGCCTGCCTCAGGGGCAAGTCCGGTGTCGCGAA
GGCACTGCTTCGGGCTGGAGCCGATATCAACTACGGGAGTGGGATAGCGG
ATCATCTGAGGACACCTCTCTATGCTGCATTCTGTGGCAAACACTATGAC
TTGATGAGGCAGCTGGTCGACATGGGTGTTGATATCTCGGCCAGGTACGA
CGATGGCTCCACCATTCTGCACTGTGCATTGTTCGACGACTCTCTAAAGG
TCTTTCAGAAGATAGTGGGCATGTTGGGCAACTTGGACGCTACCGATAGA
GATGGGGACACAACTCTAATGGTCTATTCGATGATTTTGCACCCCAATTC
GTCTGTAAAGCACCAATTGGAGAAGACTAAAGTGTTACTCAAGGCGGGTG
CAAGTCTCTCCGTAGTCGGCAGAGATGGTTACAGTCCCCTACATGGCGCC
TCACAAGTTGGTAACCACGTGATCGTTCGGATGCTCCTGGATGCTGGAGC
AAGTGTTTCTGCCCGCTCACATCACGATTTGACGGCATTGATGCACGCCG
TAAAATACGGACAACTGGCAGTGGTGCGGCTTTTAGTTCAAGCGGGAGCG
GATATTGAG
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Coding sequence (CDS) from alignment at H-paniculata_contig1896:1733..2491+

>mRNA_H-paniculata_contig1896.4736.1 ID=mRNA_H-paniculata_contig1896.4736.1|Name=mRNA_H-paniculata_contig1896.4736.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1458bp|location=Sequence derived from alignment at H-paniculata_contig1896:1733..2491+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCCACAATTTACGAGGCAATCCAAGCGGTTTACGAGGGCAATACTAG
ATTCGTTACCAAATGGCTGGATGACAACCCCTCCATCCATCCAGACGCGC
CTGAACTTCGAGCACAAGGATTGACTCTTCTCTACGTCGCCTGCCTCAGG
GGCAAGTCCGGTGTCGCGAAGGCACTGCTTCGGGCTGGAGCCGATATCAA
CTACGGGAGTGGGATAGCGGATCATCTGAGGACACCTCTCTATGCTGCAT
TCTGTGGCAAACACTATGACTTGATGAGGCAGCTGGTCGACATGGGTGTT
GATATCTCGGCCAGGTACGACGATGGCTCCACCATTCTGCACTGTGCATT
GTTCGACGACTCTCTAAAGGTCTTTCAGAAGATAGTGGGCATGTTGGGCA
ACTTGGACGCTACCGATAGAGATGGGGACACAACTCTAATGGTCTATTCG
ATGATTTTGCACCCCAATTCGTCTGTAAAGCACCAATTGGAGAAGACTAA
AGTGTTACTCAAGGCGGGTGCAAGTCTCTCCGTAGTCGGCAGAGATGGTT
ACAGTCCCCTACATGGCGCCTCACAAGTTGGTAACCACGTGATCGTTCGG
ATGCTCCTGGATGCTGGAGCAAGTGTTTCTGCCCGCTCACATCACGATTT
GACGGCATTGATGCACGCCGTAAAATACGGACAACTGGCAGTGGTGCGGC
TTTTAGTTCAAGCGGGAGCGGATATTGAGATGGCCACAATTTACGAGGCA
ATCCAAGCGGTTTACGAGGGCAATACTAGATTCGTTACCAAATGGCTGGA
TGACAACCCCTCCATCCATCCAGACGCGCCTGAACTTCGAGCACAAGGAT
TGACTCTTCTCTACGTCGCCTGCCTCAGGGGCAAGTCCGGTGTCGCGAAG
GCACTGCTTCGGGCTGGAGCCGATATCAACTACGGGAGTGGGATAGCGGA
TCATCTGAGGACACCTCTCTATGCTGCATTCTGTGGCAAACACTATGACT
TGATGAGGCAGCTGGTCGACATGGGTGTTGATATCTCGGCCAGGTACGAC
GATGGCTCCACCATTCTGCACTGTGCATTGTTCGACGACTCTCTAAAGGT
CTTTCAGAAGATAGTGGGCATGTTGGGCAACTTGGACGCTACCGATAGAG
ATGGGGACACAACTCTAATGGTCTATTCGATGATTTTGCACCCCAATTCG
TCTGTAAAGCACCAATTGGAGAAGACTAAAGTGTTACTCAAGGCGGGTGC
AAGTCTCTCCGTAGTCGGCAGAGATGGTTACAGTCCCCTACATGGCGCCT
CACAAGTTGGTAACCACGTGATCGTTCGGATGCTCCTGGATGCTGGAGCA
AGTGTTTCTGCCCGCTCACATCACGATTTGACGGCATTGATGCACGCCGT
AAAATACGGACAACTGGCAGTGGTGCGGCTTTTAGTTCAAGCGGGAGCGG
ATATTGAG
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