mRNA_H-paniculata_contig18919.4727.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig18919.4727.1
Unique NamemRNA_H-paniculata_contig18919.4727.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig18919.4727.1 vs. uniprot
Match: D8LLG8_ECTSI (Short-chain dehydrogenase/reductase SDR n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLG8_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 1.080e-80
Identity = 172/389 (44.22%), Postives = 211/389 (54.24%), Query Frame = 1
Query:  358 GGGDGDFTVDNKEVLHAVVTGANRGLGFAIADEMVSLG-HRTVLACRDKNEGDAALERIRSHWPRQLAE---------LASVHQLDVASADSIRTFQKNCVEGQLGGRVDILFNNAAVCFEGRD-----------SAVVDHTLAVNVFGAVDVMKACLPAMCG-----------------------------HEATVVWVSSGDGELCFLGSKWQGILREASTVEEVISYLTDLQDVA------------------KTEKWQHQQEEIAFGPTPIYSLSKAAANAVVRTLAPSLQDSS----------------GGGVRLVAVCPGDVLTRMFSMTEATTAAFGTGADEEHSRPLLPEEAARVVTDVALRSF-DFPCGRFYRNGKEIGW 1269
            GGGD     D   + + +VTGANRGLGFAIAD M+ LG +R VLACR++ EG  ALER+R    ++            LAS   LDV    S+  F+++CV G LGGRVDILFNNA VCF  +D           + ++  TLAVN FGA++V++AC+PA+                                  TVVW+SSGDGELCFLGSKW+G+L EA ++E+V S L+DL   A                  + E  Q Q EE+AFGPTP YSLSKAA NA VRT AP +Q  +                GGGVRLVAVCPGDVLTRM S  E                 + PEEAA  V D+AL S  D P GRFYR+G+EIGW
Sbjct:   45 GGGD-----DGGILRNVIVTGANRGLGFAIADRMLKLGSYRVVLACRNEQEGRDALERLRGKQQQRRQRQYGTIATNFLASFFPLDVTCPRSVEVFREDCVNGHLGGRVDILFNNAGVCFPEQDGNGPQNNRAAAAGILRETLAVNFFGALEVVEACVPALQAAAPMVARKEKKKAALMLEDNGATSTMTSLKPPTVVWISSGDGELCFLGSKWRGLLAEAQSLEDVKSPLSDLLATATDTITTTSKQNSTAPAGSQQEGEQGQVEEMAFGPTPAYSLSKAAVNAAVRTWAPCIQAPTVPAEAPENTKSRTGVRGGGVRLVAVCPGDVLTRMTSKEEMA-----------RGDAVSPEEAAVEVVDLALSSANDIPAGRFYRHGEEIGW 417          
BLAST of mRNA_H-paniculata_contig18919.4727.1 vs. uniprot
Match: A0A835YS44_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS44_9STRA)

HSP 1 Score: 157 bits (398), Expect = 1.420e-40
Identity = 116/312 (37.18%), Postives = 152/312 (48.72%), Query Frame = 1
Query:  391 KEVLHAVVTGANRGLGFAIADEMVSLGHRTVLACRDKNEGDAALERIRSHWPRQLAELASVHQLDVASADSIRTFQKNCVEGQLGGRVDILFNNAAVCFEGRDSAVVDHTLAVNVFGAVDVMKACLPAMCGHEATVVWVSSGDGELCFLGSKWQGILREASTVEEVISYLTDLQDVAKTEKWQHQQEEIAFGPTPIYSLSKAAANAVVR--------------TLAPSLQDSSGGGVR-----LVAVCPGDVLTRMFSMTEATTAAFGTGADEEHSRPLLPEEAARVVTDVALRSFDFPCGRFYRNGKEIGW 1269
            +E   A+VTGA+RGLG A+A  +V   +  +L  R + +G  A   + +H   Q     +  QLDV+S DSI+ F   C+     G +  +FNNA VC  G D A + ++L VN +G + VM+ACLP M   E  VV VSSGDGEL +L S     LR+A TV++V +   D+   A  +       E+AFG TP YS+SKA  NA VR               L      S GGG       ++AVCPGDV T M S  EA           +    L   EAA  V  +A        G FYR G  I W
Sbjct:   44 RECKTALVTGASRGLGLAVATLLVQQDYHVILTARSEADGLKAASDLSAHC--QGTGEITFRQLDVSSPDSIKHFATQCLPTLPSGSLTAVFNNAGVCLPGADIATLQYSLGVNFYGPLRVMEACLPFM-DEEGVVVNVSSGDGELLWLNSDIAEALRQAQTVQDVRAAADDILQRAALDPGA----ELAFGATPAYSVSKALLNAAVRCRHGIPYAPDPAEGALNAGRASSRGGGSTAQRPAVIAVCPGDVRTLMASEEEA-----------QREGVLSALEAAAHVVGLATWRERTAGGLFYRYGAVIPW 337          
BLAST of mRNA_H-paniculata_contig18919.4727.1 vs. uniprot
Match: A0A7S1GWA1_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GWA1_HEMAN)

HSP 1 Score: 141 bits (355), Expect = 3.290e-35
Identity = 106/288 (36.81%), Postives = 148/288 (51.39%), Query Frame = 1
Query:  415 TGANRGLGFAIADEMVSLGHRTVLACRDKNEGDAALERIRSHWPRQLAELASVHQLDVASADSIRTFQKNCVEGQLGGRVDILFNNAAVCFEGRDSAVVDHTLAVNVFGAVDVMKACLPAMCGHEATVVWVSSGDGELCFLGSKWQGILREASTVEEVISYLTDLQDVAKTEKWQHQQEEIAFGPTPIYSLSKAAANAVVRTLAPSLQDSSGG---GVRLVAVCPGDVLTRMFSMTEATTAAFGTGADEEHSRPLLPEEAARVVTDVALRSFDFPCGRFYRNGKEIGW 1269
            TG NRGLG A+A E+   G +  +A R+                    ++ SV QLDV    S+    + C++G+L    D+L +NA VC EG D ++ DH + VN FGA+ +++A  PAM      VV +SSG+GEL +L S+ Q +L    +V+E+   +    D A+        EE+AFGPTP YS+SKA  NA+ R LA S + S      GVR  AVCPGDV T M ++             +E    L PE+AA  V  VAL   +   G F+R+   I W
Sbjct:    1 TGGNRGLGRALAWELAREGLQVWVAARNXXXXXXXXXXXXXXXX----DVESV-QLDVGCDASVGGVAEQCLDGRLPVP-DLLISNAGVCLEGSDRSIFDHAMQVNFFGALRMIRALAPAMRRKGGCVVNISSGEGELVYLCSRLQELLPSIESVDELCRVMEACIDDAEG------GEELAFGPTPSYSVSKAGLNALTRILACSTRGSPHDHTLGVR--AVCPGDVDTAMCTL-------------DEKDGVLSPEQAAIDVVWVALHPEECANGGFFRHRDSIPW 261          
BLAST of mRNA_H-paniculata_contig18919.4727.1 vs. uniprot
Match: A0A7S2XFG2_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XFG2_9EUKA)

HSP 1 Score: 135 bits (339), Expect = 1.840e-32
Identity = 101/304 (33.22%), Postives = 152/304 (50.00%), Query Frame = 1
Query:  409 VVTGANRGLGFAIADEMVSLGHRTVLACRDKNEGDAALERIRSHWPRQLAELASVHQLDVASADSIRTFQKNCVEGQLGGRVDILFNNAAVCFEGRDSAVVDHTLAVNVFGAVDVMKACLPAMC---------GHEATVVWVSSGDGELCFLGSKWQGILREASTVEEVISYLTDLQDVAKTEKWQHQQE---EIAFGPTPIYSLSKAAANAVVRTLAPSLQDSSGGGVRLVAVCPGDVLTRMFSMTEATTAAFGTGADEEHSRPLLPEEAARVVTDVAL---RSFD--FPCGRFYRNGKEIGW 1269
            +VTG  RGLG+AIA+ M   G+  V+A RD+N G+ A   I+     +     S  +LD+ +A+SI  F++ C     GG VD+LFNNAAVC EG +  V   +  +NV G + +++  +               +  V+ VSS +GEL +L S     L  AS  ++  + +  L+ +      Q+  +   E AFGPTP YS+SKAA  A+ + LA   +D  G    + AVCPGDV T M +              E+ S  + P EA+  V  +AL   R  D     G+F+R  +++ W
Sbjct:   24 IVTGGTRGLGYAIAERMARRGYDVVIAGRDENIGNEAATNIQRSISTRGVGTVSYRKLDLENAESINNFRQWCRRNVEGG-VDVLFNNAAVCLEGSNVEVARSSFQINVIGPLALVEGLMEQQKMDDRRERRKSTQRCVINVSSSEGELGYLHSSLAEALLTASASDDPQAVIRVLESI------QNDFDPLLEYAFGPTPFYSVSKAALIALTQVLA--RRDPDGRSFAVHAVCPGDVSTSMMT-------------PEQESHAVSPAEASEDVVWLALAHPRRADGKLDHGKFWRYREQVEW 305          
BLAST of mRNA_H-paniculata_contig18919.4727.1 vs. uniprot
Match: A0A7S0BP00_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BP00_9RHOD)

HSP 1 Score: 122 bits (305), Expect = 4.540e-28
Identity = 93/290 (32.07%), Postives = 142/290 (48.97%), Query Frame = 1
Query:  406 AVVTGANRGLGFAIADEMVSLGHRTVLACRDKNEGDAALERI-RSHWPRQLAELASVHQLDVASADSIRTFQKNCVEGQLGGRVDILFNNAAVCFEGRDSAVVDHTLAVNVFGAVDVMKACLPAMCGHEATVVWVSSGDGELCFLGSKWQGILREASTVEEVISYLTDLQDVAKTEKWQHQQEEIAFGPTPIYSLSKAAANAVVRTLAPSLQDSSGGGVRLVAVCPGDVLTRMFSMTEATTAAFGTGADEEHSRPLLPEEAARVVTDVALRS-FDFPCGRFYRNGKEIGW 1269
            A+VTGA RGLG AI + +  L H  +L  RD  +G A      R  +  +  EL   H+    SA+++       V  Q G  +D++ NNAAVC E   S+ +   L VN+FGAV  +  CL  + G +A +V VSSGDGE  +L +  +    +  + + ++  L +L + A +       +E+  G  P Y +SK A N   R L   L +S   G+R++AVCPGDV T               G +   SR   P +AA+ + ++ +     +  G FYR+ + I W
Sbjct:    8 ALVTGATRGLGLAIVEVLAGLDHHVLLTGRDVEKGCAEAGSFQRKGFDVRFLELDVCHE---RSAENLALV----VRDQYGA-LDVIVNNAAVCLEDWSSSALMDCLEVNLFGAVRTVS-CLGQLLGEDACIVNVSSGDGESVWLSTAVRERFEKVQSTKVLLDVLRELAEKADS----LPSQEVVHGEQPTYKVSKFALNCYTRLLHNDLNES---GIRVLAVCPGDVRT---------------GMNPSASR--CPSDAAKAIVELVVGGPSTYQSGGFYRDCEIISW 264          
BLAST of mRNA_H-paniculata_contig18919.4727.1 vs. uniprot
Match: A0A7S2ZT12_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZT12_9RHOD)

HSP 1 Score: 117 bits (293), Expect = 2.180e-26
Identity = 90/290 (31.03%), Postives = 135/290 (46.55%), Query Frame = 1
Query:  406 AVVTGANRGLGFAIADEMVSLGHRTVLACRDKNEGDAALERI-RSHWPRQLAELASVHQLDVASADSIRTFQKNCVEGQLGGRVDILFNNAAVCFEGRDSAVVDHTLAVNVFGAVDVMKACLPAMCGHEATVVWVSSGDGELCFLGSKWQGILREASTVEEVISYLTDLQDVAKTEKWQHQQEEIAFGPTPIYSLSKAAANAVVRTLAPSLQDSSGGGVRLVAVCPGDVLTRMFSMTEATTAAFGTGADEEHSRPLLPEEAARVVTDVALRS-FDFPCGRFYRNGKEIGW 1269
            A+VTGA RGLG AI +E+  L H  +L  RD  +G        R  +  +  EL      D  SA+++       V  Q G  +D++ NNAAVC E   S+ + + L VN FGAV  + ACL  +   +A ++ VSSGDGE  +  +  +       +   ++  L D  + A         EE+  G  P Y +SK A N   R L   L +S   G+R+++VCPGDV TRM                   S    P +AA+ + ++ +     +  G F+R+ + I W
Sbjct:    8 ALVTGATRGLGLAIVEELAGLNHHVLLTGRDVEKGYVEAGSFQRKGFDVRFLEL---DVCDERSAENLALV----VRDQYGA-LDVIVNNAAVCLEEWSSSALTNCLEVNFFGAVRTV-ACLGQLLAKDACILNVSSGDGESVWFSTAVRERFEGVQSTNALLDALRDFAEKADAVP----PEEVVHGEQPTYKVSKFALNCYTRLLHNDLNES---GIRVLSVCPGDVRTRM-----------------NPSASRSPSDAAKAIAELVVGGPSTYQSGSFFRDREVISW 264          
BLAST of mRNA_H-paniculata_contig18919.4727.1 vs. uniprot
Match: R1DJ38_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DJ38_EMIHU)

HSP 1 Score: 122 bits (305), Expect = 3.450e-26
Identity = 101/287 (35.19%), Postives = 130/287 (45.30%), Query Frame = 1
Query:  406 AVVTGANRGLGFAIADEMVSLGHRTVLACRDKNEGDAALERIRSHWPRQLAELASVHQLDVASADSIRTFQKNCVEGQLGGRVDILFNNAAVCFEGRDSAVVDHTLAVNVFGAVDVMKACLPAMCGHE-ATVVWVSSGDGELCFLGSKWQGILREASTVEEVISYLTDLQDVAKTEKWQHQQEEIAFGPTPIYSLSKAAANAVVRTLAPSLQDSSGGGVRLVAVCPGDVLTRMFSMTEATTAAFGTGADEEHSRPLLPEEAARVVTDVALRSFDFPCGRFYRNGKEI 1263
            A+VTGANRG+G A A  +  LG   VLACRD++   A  E   +   R LA        D     S       C       RVD+L NNAAVC  G    V   +   NV     + +A LP M       V+ VSSGDGEL FL S     L  A++  E++  L  L      + ++      A GPTP YS+SKAA N   R +  +L     GGV + A CPGDV TRM S       A    A ++ +R L          + A R  +   GRF+R G+ I
Sbjct:  296 ALVTGANRGIGLATAGRLAELGASVVLACRDES---ACREAAAALSVRGLAAEPYAASFDAECPRSTSALAAACASL----RVDLLVNNAAVCEPGWGRDVALRSFRTNVLAPATLTRAVLPGMLRRRRGAVLHVSSGDGELVFLSSDLAPRLAGAASERELLRLLARLS--RGRDGFRFPDRPPAHGPTPAYSVSKAALNRHTRLVGDALPRD--GGVWVGAACPGDVRTRMCSCERHEGVASPESAADDLAR-LAAGALGGXXXEAAARRLE--SGRFWRAGRTI 568          
BLAST of mRNA_H-paniculata_contig18919.4727.1 vs. uniprot
Match: A0A1C6W2U0_9ACTN (Short-chain dehydrogenase n=1 Tax=Micromonospora citrea TaxID=47855 RepID=A0A1C6W2U0_9ACTN)

HSP 1 Score: 115 bits (289), Expect = 4.120e-26
Identity = 104/296 (35.14%), Postives = 133/296 (44.93%), Query Frame = 1
Query:  406 AVVTGANRGLGFAIADEMVSLGHRTVLACRDKNEGDAALERIRSHWPRQLAELASVHQLDVASADSIRTFQKNCVEGQLGGRVDILFNNAAVCFE------GRDSAVVDHTLAVNVFGAVDVMKACLPAMCGHEA--TVVWVSSGDGELCFLGSKWQGILREASTVEEVISYLTDLQDVAKTEKWQHQQEEIAFGPTPIYSLSKAAANAVVRTLAPSLQDSSGGGVRLVAVCPGDVLTRMFSMTEATTAAFGTGADEEHSRPLLPEEAARVVTDVALRSFDFPCGRFYRNGKEIGW 1269
            AVVTGANRG+G A+A ++   G+RTVLA RD   G AA         R+L   A+V QLDVA ADS+  F +   +    GRVD+L NNAAV ++      G D  +V  TL VN  GA  V +A  P M  H     +V VSS  G L                        TD+                    TP Y++SKAA NA+ R LA  L      G+ + +VCPG V T M   T   T A G               AA V+  V +   D P G F+R+G+ + W
Sbjct:   11 AVVTGANRGIGKAVAAQLARDGYRTVLAVRDPARGRAAA--------RELPAQATVEQLDVADADSVARFARRLRDRY--GRVDVLVNNAAVNYDTWQDPLGADLDLVRDTLDVNAIGAWRVSQALAPLMRRHSPGRRIVNVSSESGSL------------------------TDM-----------------HAATPAYAMSKAALNALTRLLAAQLAPD---GILVNSVCPGWVATDMGGPTAPRTPAQG---------------AASVLWAVRIPD-DGPTGGFFRDGQPLPW 236          
BLAST of mRNA_H-paniculata_contig18919.4727.1 vs. uniprot
Match: A0A561WXG8_9ACTN (Short-subunit dehydrogenase n=2 Tax=Micromonospora TaxID=1873 RepID=A0A561WXG8_9ACTN)

HSP 1 Score: 114 bits (285), Expect = 1.430e-25
Identity = 99/296 (33.45%), Postives = 130/296 (43.92%), Query Frame = 1
Query:  406 AVVTGANRGLGFAIADEMVSLGHRTVLACRDKNEGDAALERIRSHWPRQLAELASVHQLDVASADSIRTFQKNCVEGQLGGRVDILFNNAAVCFE------GRDSAVVDHTLAVNVFGAVDVMKACLPAMC--GHEATVVWVSSGDGELCFLGSKWQGILREASTVEEVISYLTDLQDVAKTEKWQHQQEEIAFGPTPIYSLSKAAANAVVRTLAPSLQDSSGGGVRLVAVCPGDVLTRMFSMTEATTAAFGTGADEEHSRPLLPEEAARVVTDVALRSFDFPCGRFYRNGKEIGW 1269
            AVVTGANRG+G A+  +++  G  TVLACRD   G+AA   +     R L     V +LDV   DS+R F     +    GRVD+L NNA + ++      G D  VV     VN  GA+ V +A LP +   G    +V VSSG G L  +G+                                          TP Y++SKAA NAV R  A  L      G+ + +VCPG V T M           G G      RP+  E AA V+  V L   D P G F+R+G+ + W
Sbjct:    7 AVVTGANRGIGLAVVQQLLDRGFVTVLACRDTGRGEAAAATLTPAPGRVL-----VRRLDVGDDDSVRAFAAGLADAP--GRVDVLVNNAGIHYDTDQDPAGADVGVVREAFEVNALGALKVSQAVLPLLRRQGPGRRIVNVSSGAGSLSSMGAG-----------------------------------------TPAYAISKAALNAVTRLFAAQLAPD---GILVNSVCPGWVATDM----------GGRGG-----RPVA-EGAASVLWAVDLPD-DGPTGGFFRDGRPVPW 234          
BLAST of mRNA_H-paniculata_contig18919.4727.1 vs. uniprot
Match: A0A7S0NQP3_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NQP3_9EUKA)

HSP 1 Score: 114 bits (286), Expect = 2.690e-25
Identity = 100/297 (33.67%), Postives = 132/297 (44.44%), Query Frame = 1
Query:  406 AVVTGANRGLGFAIADEMVSLGHRTVLACRDKNEGDAALERIRSHWPRQLAELASVHQLDVASADSIRTFQKNCVEGQLGGRVDILFNNAAVCFEGRDSAVVDHTLAVNVFGAVDVMK-----ACLPAMCGHEATVVWVSSGDGELCFLGSKWQGILREASTVEEVISYLTDLQDVAKTEKWQHQQEEIAFGPTPIYSLSKAAANAVVRTLAPSLQDSSGG------GVRLVAVCPGDVLTRMFSMTEATTAAFGTGADEEHSRPLLPEEAARVVTDVALRSFDFPCGRFYRNGKEI 1263
            AVVTGANRGLG A+A  +   G   +L  RD          + S     L   A    LDV+   S+R F ++C   Q     ++L NNAAVC  G    VV  +L  NV G + + +      C          V+ VSSGDGEL +L S  Q   R AS+V  ++  L  +     T   Q      A  PTP YS+SKAA NA+ R LA    + +GG       V   AVCPGDV TRM S+              E    L  + AA  +  +   +   P G+F+R  + I
Sbjct:    5 AVVTGANRGLGAALARCLAMSGCSVLLTGRDAPAVGRLAATLASTG---LPAFAYPAALDVSDMRSVRNFAEHCARSQ--AVPEVLINNAAVCERGWTRQVVRRSLKTNVIGPLALCRELGAVGCAAPRRARRLRVLNVSSGDGELVYLNSALQDEFRRASSVRTLLQLLARV-----TPPRQTIGGAPAHSPTPAYSVSKAALNALTRILA---GEHAGGTSELCASVWFAAVCPGDVSTRMCSI--------------EPREALSADAAAHDLVWLLRHAEALPSGKFWRQCEAI 274          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18919.4727.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLG8_ECTSI1.080e-8044.22Short-chain dehydrogenase/reductase SDR n=2 Tax=Ec... [more]
A0A835YS44_9STRA1.420e-4037.18Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
A0A7S1GWA1_HEMAN3.290e-3536.81Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A7S2XFG2_9EUKA1.840e-3233.22Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S0BP00_9RHOD4.540e-2832.07Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S2ZT12_9RHOD2.180e-2631.03Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
R1DJ38_EMIHU3.450e-2635.19Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A1C6W2U0_9ACTN4.120e-2635.14Short-chain dehydrogenase n=1 Tax=Micromonospora c... [more]
A0A561WXG8_9ACTN1.430e-2533.45Short-subunit dehydrogenase n=2 Tax=Micromonospora... [more]
A0A7S0NQP3_9EUKA2.690e-2533.67Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18919contigH-paniculata_contig18919:2004..4276 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score266.5
Seed ortholog evalue1.9e-68
Seed eggNOG ortholog2880.D8LLG8
KEGG rclassRC00005,RC00049,RC00397,RC00709
KEGG koko:K07192,ko:K13646
KEGG ReactionR03376,R03380,R04491
KEGG Pathwayko00310,ko00514,ko04910,map00310,map00514,map04910
Hectar predicted targeting categoryother localisation
EggNOG free text desc.oxidation-reduction process
EggNOG OGsCOG1028@1,KOG1208@2759
EC1.14.11.4,2.4.1.50,2.4.1.66
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003,ko03036,ko04131,ko04147
Exons3
Model size1395
Cds size1158
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18919.4727.1prot_H-paniculata_contig18919.4727.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig18919 2118..4153 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929453.5164194-UTR-H-paniculata_contig18919:2003..21171622929453.5164194-UTR-H-paniculata_contig18919:2003..2117Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig18919 2004..2117 +
1691480868.0168018-UTR-H-paniculata_contig18919:2003..21171691480868.0168018-UTR-H-paniculata_contig18919:2003..2117Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig18919 2004..2117 +
1622929453.595894-UTR-H-paniculata_contig18919:4153..42761622929453.595894-UTR-H-paniculata_contig18919:4153..4276Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig18919 4154..4276 +
1691480868.0647752-UTR-H-paniculata_contig18919:4153..42761691480868.0647752-UTR-H-paniculata_contig18919:4153..4276Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig18919 4154..4276 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929453.5328403-CDS-H-paniculata_contig18919:2117..25101622929453.5328403-CDS-H-paniculata_contig18919:2117..2510Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18919 2118..2510 +
1691480868.0287669-CDS-H-paniculata_contig18919:2117..25101691480868.0287669-CDS-H-paniculata_contig18919:2117..2510Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18919 2118..2510 +
1622929453.5592518-CDS-H-paniculata_contig18919:2786..31611622929453.5592518-CDS-H-paniculata_contig18919:2786..3161Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18919 2787..3161 +
1691480868.038346-CDS-H-paniculata_contig18919:2786..31611691480868.038346-CDS-H-paniculata_contig18919:2786..3161Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18919 2787..3161 +
1622929453.5842204-CDS-H-paniculata_contig18919:3763..41531622929453.5842204-CDS-H-paniculata_contig18919:3763..4153Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18919 3764..4153 +
1691480868.0551767-CDS-H-paniculata_contig18919:3763..41531691480868.0551767-CDS-H-paniculata_contig18919:3763..4153Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18919 3764..4153 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig18919.4727.1

>prot_H-paniculata_contig18919.4727.1 ID=prot_H-paniculata_contig18919.4727.1|Name=mRNA_H-paniculata_contig18919.4727.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=386bp
MIFGLHKSWVVMVSLGASPLPPSWKTGGNSWRARTPSSRQQRGCDGNGCH
TATGDRRRGKHRAMVSMCRLMKDYRNAISDYGGGDGDFTVDNKEVLHAVV
TGANRGLGFAIADEMVSLGHRTVLACRDKNEGDAALERIRSHWPRQLAEL
ASVHQLDVASADSIRTFQKNCVEGQLGGRVDILFNNAAVCFEGRDSAVVD
HTLAVNVFGAVDVMKACLPAMCGHEATVVWVSSGDGELCFLGSKWQGILR
EASTVEEVISYLTDLQDVAKTEKWQHQQEEIAFGPTPIYSLSKAAANAVV
RTLAPSLQDSSGGGVRLVAVCPGDVLTRMFSMTEATTAAFGTGADEEHSR
PLLPEEAARVVTDVALRSFDFPCGRFYRNGKEIGW*
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mRNA from alignment at H-paniculata_contig18919:2004..4276+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig18919.4727.1 ID=mRNA_H-paniculata_contig18919.4727.1|Name=mRNA_H-paniculata_contig18919.4727.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2273bp|location=Sequence derived from alignment at H-paniculata_contig18919:2004..4276+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACCGTCGCCTAGACTCCACACAGCCGAAGCTCTCTTGTGCCCTCCCGCGA TCCATGAATATATGAGCAATTTTTTTGAGAAGTCTTTCTGTTGTACTTTG GTAATCTTCTTGGTATGATCTTTGGCTTGCACAAGAGCTGGGTAGTTATG GTATCACTTGGAGCCTCCCCGTTACCACCATCCTGGAAAACAGGCGGTAA CAGTTGGCGTGCCCGCACGCCATCGTCACGACAACAACGTGGCTGTGATG GGAATGGGTGCCACACGGCTACTGGCGATCGAAGACGAGGGAAACATAGG GCAATGGTATCGATGTGTCGCCTGATGAAGGACTATCGCAATGCTATTAG TGATTATGGCGGCGGTGATGGTGACTTTACGGTAGACAATAAAGAAGTCC TGCACGCGGTCGTGACCGGCGCAAACCGGGGGCTAGGATTTGCCATTGCA GATGAGATGGTTTCGCTCGGGCACAGGACTGTGCTCGCCTGTAGGGACAA GAACGAGGTCAGTCCCCTGATTTTGCCTTGTAGCCTTAGCTGAAAACACT TCGGACCTAGTTCTAACCAGCATTGCTTTGTTTCCAGGGGAAGAGAAGGG GCTATATTCTCCCCTGACAGGAACATTACTTCAGGGCCAAACGGTCGCTC AAGTCGTGTCGCCGTGTCACCCCGTTTGCAAAAAAGTTCAAGAAGCGAAA CTAGGGGTAAAAATTGATGGTAACTCGCTGCCGCAAATCCTTACACCTTC CACCTAATATATGACCGCCCCCCACGCATATAGGGCGATGCAGCGTTGGA AAGAATACGATCACATTGGCCGCGGCAGCTCGCGGAGCTTGCATCCGTCC ACCAGCTTGACGTTGCAAGCGCGGACAGCATACGCACGTTCCAAAAGAAC TGCGTCGAAGGGCAACTGGGTGGGAGGGTCGACATCTTGTTCAACAATGC AGCCGTTTGTTTCGAGGGAAGAGATAGTGCTGTCGTCGACCACACCCTTG CCGTTAACGTTTTCGGTGCGGTGGACGTCATGAAGGCCTGTTTGCCGGCA ATGTGTGGGCATGAGGCTACCGTCGTGTGGGTTTCTAGCGGGGACGGAGA GCTTTGCTTTCTGGGGAGCAAGTGGCAGGGGATACTCCGCGAAGCCTCTA CTGTTGAGGTGGGTACCTGCATTTTAAACGTGCGTTTTGTTGCGGAAACA TGGCAATGAAGGAAGTCGTGCCCGCCATCTTGTGAACAGGTAGGTACATC CACGGCGCATTCCCGTGTCCATTGATCGTCGAGAGGAAAATATTGAAGTT CGGTATGTATGGCTGAGGAGAAAAAGGGAAAAGGTGCTAGTAAAAACAGA TTTCCTTTTGGTCCGCAATTTTAAACGATGATTATGATCGATGGAAAAAT CTGGTTGATGAGTGCCATGGATCCTGTGTTCAGTTGCTGGGTTCTCGCGC TTCGAGCATCCGAACGCTGTGATGTTGATTTGGTGCGTAGGATTCGTGAA TAGCCAAGGTGAACCCAGGCCCCCTTTCGCGGTGCCCTGCCTGCGAGAAT GAATGTCTCAGTTTTGTTTTGCAGACCCATGTAACCTGAGTGCCACGATG GCTTCAAGAATTGAACAAAGATCCAAAGAATCAAAGCGCGACCAAACCCA GTGCCTGTTTACTCCGCAGTACTACTGAGTGTTGAAATAAGTTATGCCAT GGCGCACACTTCCCCCCTCCCTCCTCCCCGCCCCACCCGCCCACCCCCCC ATCACATCAGGAGGTCATAAGTTATCTAACGGATCTTCAGGACGTCGCCA AAACCGAGAAATGGCAACACCAACAAGAGGAAATTGCGTTCGGGCCCACA CCGATTTACAGTCTATCCAAGGCCGCTGCCAATGCGGTGGTTCGCACTCT AGCGCCTTCTCTCCAAGATTCCAGCGGGGGGGGAGTGAGGTTAGTTGCCG TGTGTCCCGGTGATGTGCTAACGCGTATGTTCTCGATGACGGAGGCGACG ACTGCGGCTTTCGGGACGGGGGCTGATGAAGAGCACAGCCGACCTCTTCT GCCGGAAGAGGCTGCACGCGTGGTTACAGATGTCGCGCTGCGCTCGTTCG ATTTCCCCTGCGGCCGCTTCTATAGAAATGGGAAAGAGATAGGTTGGTGA TTAGTGAGATGGAGCGAACCCCGGACTGAATTAGCACAGGAAACCTCGGG CAAAATGTGATGGGACACTCGACTCCGCATATTGAGAGTGACGCCTCAGG CATAACGGTGGTCGCCGAGCCGC
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Coding sequence (CDS) from alignment at H-paniculata_contig18919:2004..4276+

>mRNA_H-paniculata_contig18919.4727.1 ID=mRNA_H-paniculata_contig18919.4727.1|Name=mRNA_H-paniculata_contig18919.4727.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2316bp|location=Sequence derived from alignment at H-paniculata_contig18919:2004..4276+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATCTTTGGCTTGCACAAGAGCTGGGTAGTTATGGTATCACTTGGAGC
CTCCCCGTTACCACCATCCTGGAAAACAGGCGGTAACAGTTGGCGTGCCC
GCACGCCATCGTCACGACAACAACGTGGCTGTGATGGGAATGGGTGCCAC
ACGGCTACTGGCGATCGAAGACGAGGGAAACATAGGGCAATGGTATCGAT
GTGTCGCCTGATGAAGGACTATCGCAATGCTATTAGTGATTATGGCGGCG
GTGATGGTGACTTTACGGTAGACAATAAAGAAGTCCTGCACGCGGTCGTG
ACCGGCGCAAACCGGGGGCTAGGATTTGCCATTGCAGATGAGATGGTTTC
GCTCGGGCACAGGACTGTGCTCGCCTGTAGGGACAAGAACGAGATGATCT
TTGGCTTGCACAAGAGCTGGGTAGTTATGGTATCACTTGGAGCCTCCCCG
TTACCACCATCCTGGAAAACAGGCGGTAACAGTTGGCGTGCCCGCACGCC
ATCGTCACGACAACAACGTGGCTGTGATGGGAATGGGTGCCACACGGCTA
CTGGCGATCGAAGACGAGGGAAACATAGGGCAATGGTATCGATGTGTCGC
CTGATGAAGGACTATCGCAATGCTATTAGTGATTATGGCGGCGGTGATGG
TGACTTTACGGTAGACAATAAAGAAGTCCTGCACGCGGTCGTGACCGGCG
CAAACCGGGGGCTAGGATTTGCCATTGCAGATGAGATGGTTTCGCTCGGG
CACAGGACTGTGCTCGCCTGTAGGGACAAGAACGAGGGCGATGCAGCGTT
GGAAAGAATACGATCACATTGGCCGCGGCAGCTCGCGGAGCTTGCATCCG
TCCACCAGCTTGACGTTGCAAGCGCGGACAGCATACGCACGTTCCAAAAG
AACTGCGTCGAAGGGCAACTGGGTGGGAGGGTCGACATCTTGTTCAACAA
TGCAGCCGTTTGTTTCGAGGGAAGAGATAGTGCTGTCGTCGACCACACCC
TTGCCGTTAACGTTTTCGGTGCGGTGGACGTCATGAAGGCCTGTTTGCCG
GCAATGTGTGGGCATGAGGCTACCGTCGTGTGGGTTTCTAGCGGGGACGG
AGAGCTTTGCTTTCTGGGGAGCAAGTGGCAGGGGATACTCCGCGAAGCCT
CTACTGTTGAGGGCGATGCAGCGTTGGAAAGAATACGATCACATTGGCCG
CGGCAGCTCGCGGAGCTTGCATCCGTCCACCAGCTTGACGTTGCAAGCGC
GGACAGCATACGCACGTTCCAAAAGAACTGCGTCGAAGGGCAACTGGGTG
GGAGGGTCGACATCTTGTTCAACAATGCAGCCGTTTGTTTCGAGGGAAGA
GATAGTGCTGTCGTCGACCACACCCTTGCCGTTAACGTTTTCGGTGCGGT
GGACGTCATGAAGGCCTGTTTGCCGGCAATGTGTGGGCATGAGGCTACCG
TCGTGTGGGTTTCTAGCGGGGACGGAGAGCTTTGCTTTCTGGGGAGCAAG
TGGCAGGGGATACTCCGCGAAGCCTCTACTGTTGAGGAGGTCATAAGTTA
TCTAACGGATCTTCAGGACGTCGCCAAAACCGAGAAATGGCAACACCAAC
AAGAGGAAATTGCGTTCGGGCCCACACCGATTTACAGTCTATCCAAGGCC
GCTGCCAATGCGGTGGTTCGCACTCTAGCGCCTTCTCTCCAAGATTCCAG
CGGGGGGGGAGTGAGGTTAGTTGCCGTGTGTCCCGGTGATGTGCTAACGC
GTATGTTCTCGATGACGGAGGCGACGACTGCGGCTTTCGGGACGGGGGCT
GATGAAGAGCACAGCCGACCTCTTCTGCCGGAAGAGGCTGCACGCGTGGT
TACAGATGTCGCGCTGCGCTCGTTCGATTTCCCCTGCGGCCGCTTCTATA
GAAATGGGAAAGAGATAGGTTGGTGAGAGGTCATAAGTTATCTAACGGAT
CTTCAGGACGTCGCCAAAACCGAGAAATGGCAACACCAACAAGAGGAAAT
TGCGTTCGGGCCCACACCGATTTACAGTCTATCCAAGGCCGCTGCCAATG
CGGTGGTTCGCACTCTAGCGCCTTCTCTCCAAGATTCCAGCGGGGGGGGA
GTGAGGTTAGTTGCCGTGTGTCCCGGTGATGTGCTAACGCGTATGTTCTC
GATGACGGAGGCGACGACTGCGGCTTTCGGGACGGGGGCTGATGAAGAGC
ACAGCCGACCTCTTCTGCCGGAAGAGGCTGCACGCGTGGTTACAGATGTC
GCGCTGCGCTCGTTCGATTTCCCCTGCGGCCGCTTCTATAGAAATGGGAA
AGAGATAGGTTGGTGA
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