prot_H-paniculata_contig1891.4723.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1891.4723.1
Unique Nameprot_H-paniculata_contig1891.4723.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length975
Homology
BLAST of mRNA_H-paniculata_contig1891.4723.1 vs. uniprot
Match: D8LEG7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEG7_ECTSI)

HSP 1 Score: 249 bits (636), Expect = 8.670e-66
Identity = 266/801 (33.21%), Postives = 346/801 (43.20%), Query Frame = 0
Query:  237 SERQKANSQRSLGELTRDWRNDPCSTPARRRRLINDVCKVIVRSYEHASVIRVVDFRQQTAVATKLQAIARMRAARTRYAAKISARRARAALCLQLAWLSHIARNRLWVLRDERDRVRRAKQLTRAREDILRWKEESAKAEREKNETAGRRHRLELATL----LQRRFRSLQERRRRQRELDVAKAAIILQTALRIRRESIRFGKCARR----------------------YRQAQQQKDRA----MASSRLIQVAWRQQKAKYKLSGNGRAALSVLYPNLSSL------------KITSAPSTRDDGDQRSSEQSISDPSEKQLSVRDLNDSISQDKEDTTAAPWEKWAERSPLVKAEGLDM-----THYLNERDVRPRTAAAAVESKPLPIQMPISSATRHPAGMMTVKVKIGKEETSLVTPIVVTENDDTEVSVSESAERRGPRENSHGFAKQNDTDSRVMHGESIPALGEITGATTAGRCQTPVVPASTTQESF-----LHFD------ETPAVQGIADVLPMVFPLTGTA-PEHAETLNPVGVPGTLNPGGVASDKSMTHNNHPDAQPILPVPPV--ATMARRNPLRATTKINERIYPVEGSEVDVHPRQVVTSVDSFMEDSQVYLGCSFCGVKFLVEAVDARLPESVQGQPTPEVLYLCTTCGGTLRQ-GEDGRWRRRXXXXXXXAATRRRNFFLNMPSH------------APNVPDSGGRGHAAVNGDDCEERRENQRGVGAHHIDTGERM------LKFRYACCASQIQHTYQNFRHRQYLRDWALALVSER 957
            ++  +ANSQRSL ++TRDWRNDP STPARRRRLINDVCKVIVR+Y HASV+RVV  R++   AT++QA  RM  AR  + AK+ ARR  AAL LQL WLS  AR R+ VLR+ RD  RR +                                          LQRRFR+ QE       + + +A   L  A R+R E  R      +                          ++ +D+A    +AS+RL Q AWR+ KA  +L+   R  L       S+               TS  S     D +  + +IS  S +Q    D+N+          A+ W+ W+    +  +   ++     T      +VRP T+  A ES   P                 V V+ G EETSLVTPIV+TE      S  E  +    R++  G A     D  V+   S   LG      T  R  T    A    E+       H D      E P    ++        +T  A P   +  +   V G ++     +   + +        ++PV PV   T A        T       P E +  DV    V  +   FMED+QVYLGC  CGVK+LVEAVD  + +S QGQPTPEVLYLCTTCG TLR  GE+GRW+RR       AA RRR    ++                P    +G R  A V      E  +      A H   G R        + RYA CA  IQH YQNFRHRQYLRDWA +LV  R
Sbjct:   16 AQHHRANSQRSLQDMTRDWRNDPFSTPARRRRLINDVCKVIVRTYTHASVLRVVGLRREERYATRIQAAFRMSWARRLFCAKLEARRVNAALVLQLGWLSCAARRRVRVLREARDHDRRVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQRRFRARQE-----LLVALTQARRRLTQAQRLRDEQHREATAMMQATXXXXXXXXXXXXXXXXXXXXXXXQRRARDKAAVERLASARL-QQAWRRYKAANELNRRRRRELETSGLRSSTTDEDATEHRTEGASSTSLCSNEGHPDPKDEDPNISKKSVRQEMSGDVNEG---------ASGWDNWSSAFGVNSSLAAEIAREGETDNAAAENVRPWTSTGAAESPAPPRSRXXXXXXXXXXXXXXVTVRRGSEETSLVTPIVLTE------SGGEEMDAETTRKSEVGTALAT-ADVTVVTAFSS-TLGSDESGGTRPRAATVADKAVRVAEAKGAAPPAHADAPKARREQPERTKLSASATAASEITKPANPAPNQDADDAAVAGKISQILSTTAPQIANEEATAVPAMVPVAPVMKGTAASEGDPPMMTVSTPMTEPAEEAARDV---VVKPTEQLFMEDTQVYLGCGMCGVKYLVEAVDPGVSKSTQGQPTPEVLYLCTTCGATLRNNGENGRWKRRRRPSSAPAAGRRRGSAFSVGGRDGGARANNEYGPPPGNGWNGDRAAALVESPSVVESLQQ-----ALHTGGGRRQGENDSATRLRYAHCAKAIQHAYQNFRHRQYLRDWAFSLVQSR 785          
BLAST of mRNA_H-paniculata_contig1891.4723.1 vs. uniprot
Match: A0A6H5JBQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBQ7_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 5.140e-51
Identity = 244/779 (31.32%), Postives = 333/779 (42.75%), Query Frame = 0
Query:  251 LTRDWRNDPCSTPARRRRLINDVCKVIVRSYEHASVIRVVDFRQQTAVATKLQAIARMRAARTRYAAKISARRARAALCLQLAWLSHIARNRLWVLRDERDRVRRAKQLTRARED----ILRWKEESAKAEREKNETAGRRHRLELATLLQRRFRSLQERRRRQRELDVAKAAIILQTALRIRRESIRFGKCARRYRQAQQQKDRAMASSRLIQVAWRQQKAKYKLSGNGRAALSVLYPNLS---SLKITSAPSTRDDGD------QRSSEQSIS------DPSEKQ--LSVRDLNDSISQDKEDTTAAPWEKWAERSPLVKAEGLDMTHYLNERD-----VRPRTAAAAVESKPLPIQMPISSATRH-------PAGMMTVKVKIGKEETSLVTPIVVTENDDTEVSVSESAERRGPRENSHGFAKQNDTDSRVM----HGESIP---ALGEITGATTAGRCQTPVVPASTTQESFLHFDETPAVQGIADVLPMVFPLTGTAPEHAETLNPVG----VPGTLNPGGVASDKSMTHNNHPDAQPILPVPPVATMARRN-------PLRATTKINERIYPVEGSEVDVHPRQVVTSVDSFMEDSQVYLGCSFCGVKFLVEAVDARLPESVQGQPTPEVLYLCTTCGGTLRQ-GEDGRWRRRXXXXXXX----------------AATRRRNFFLNMPSHAPNVPDSGGRGHAAVNGDDCEERREN--QRGVGAHHIDTGERMLKFRYACCASQIQHTYQNFRHRQYLRDWALALVSERTL 959
            ++RDWRNDP STPARRRRLINDVCKVIVR+Y HASV+RVV  R++   AT++QA  RM + R  + AK+ AR   AA  LQL WLS  A+ R+ VLR+ RD  RR ++  R R +                            LE A +LQRRFR+                                                                                          L+ +  PS+  D D      + +S +S+       DP ++   +S + +   +S D  +  A+ W+ W+    +  +   ++     E D     VRP T+  A ES       P  S +RH       PAGMMTV V+ G EETSLVTPIV+TE+   ++    + E      ++         DS ++     G + P   A+ + T      +   P   A T +      + T           +  P      + A+     G    +P T  P  +A++         +A+ +  + PVA + +         P+  +T + E   P E +  DV    V  +   FMED+QVYLGC  CGVK+LVEAVD  + +S QGQPTPEVLYLCTTCG TLR  GEDGRW+R XXXXXXX                   R  N +   P +  N    G R  A V      E  +   Q G G    +  +   + RYA CA  IQH YQNFRHRQYLRDWA +L S+  L
Sbjct:    1 MSRDWRNDPFSTPARRRRLINDVCKVIVRTYTHASVLRVVGLRREERYATRIQAAFRMISTRRLFCAKLEAR-VSAASVLQLGWLSWAAQRRVRVLRETRDHDRRVEEGRRKRREDXXXXXXXXXXXXXXXXXXXXXXXXXXXLESAVVLQRRFRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRELETSGLPSSTTDEDAMEHRTEGASSRSLCSNEGHPDPKDEDPDISKKGVRQDMSGDV-NKGASGWDNWSSAFGVNSSLAAEIARE-GETDNAAENVRPWTSTGAAES-------PAPSRSRHHHPKDPPPAGMMTVTVRRGSEETSLVTPIVLTESGGEDMDAETTRESEIGTASATAGVSVVTADSSILGSDESGGTRPRAVAVADKTVRVAEAKGAAPPAHADTPKSRRKQAERTKTPASAIAASEVAKPANPAPKQDADDAAVAGKISQIPSTTAPQ-IANE---------EAKGVSAMVPVALLRKGTAASEGDPPMTVSTPMTE---PAEEAARDV----VEPTEQLFMEDTQVYLGCGMCGVKYLVEAVDPGVSKSAQGQPTPEVLYLCTTCGATLRNNGEDGRWKRXXXXXXXXXXXXXXXSAFSVGGRDGGARANNEYGPPPGNGWN----GDRATALVESPSVVESLQQALQTGGGKRQGEN-DSATRLRYAHCAKAIQHAYQNFRHRQYLRDWAFSLASKPPL 747          
BLAST of mRNA_H-paniculata_contig1891.4723.1 vs. uniprot
Match: A0A835ZEY7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEY7_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.520e-11
Identity = 53/128 (41.41%), Postives = 72/128 (56.25%), Query Frame = 0
Query:  213 LFDRDHIMGVRKRDIEFIVSSGPRSERQKAN------SQRSLGELTRDWRNDPCSTPARRRRLINDVCKVIVRSYEHASVIRVVDFRQQTAVATKLQAIARMRAARTRYAAKISARRARAALCLQLAW 334
            L+DR H++    R I F   SG  +            S  +L  + +DW NDP STPARRRRLI++V +VIV SY+ A+  RV  FR + A AT +QA AR R A   Y A +  R+ +A + +QL W
Sbjct:   31 LYDRRHVLAQTARSIVFRRGSGSAAATDATTAAHTRLSHVALEVVAKDWINDPYSTPARRRRLIHEVSRVIVFSYKRAAAERVAAFRVECAAATVIQAHARRRFAAVIYTAALHERQVQACVRVQLWW 158          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1891.4723.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LEG7_ECTSI8.670e-6633.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBQ7_9PHAE5.140e-5131.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZEY7_9STRA1.520e-1141.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 359..379
NoneNo IPR availableGENE3D2.30.42.10coord: 1..70
e-value: 5.0E-6
score: 28.3
IPR001478PDZ domainPROSITEPS50106PDZcoord: 1..48
score: 9.21
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 295..324
score: 7.565
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 3..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1891contigH-paniculata_contig1891:2262..5838 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1891.4723.1mRNA_H-paniculata_contig1891.4723.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1891 2091..8410 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1891.4723.1 ID=prot_H-paniculata_contig1891.4723.1|Name=mRNA_H-paniculata_contig1891.4723.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=975bp
MEGLTVVDVVDGSVAARHGGVVPGMFLVGVNKRSFAGFTQEAIMQVMQGI
ARQPRILSLARVGRNNAPAHGYNLATNICSARVRGAEALRAKTHDRVGPE
ANVHSIATPELWQENPNSQHLSRPSRSSSRIISTLSIELSTWDSDDEAWS
TGNFVTNCSSSPSNIPLFATWAQGSGRALSSKSDAVGRQENFFKQQDRIL
PLRFIGSRRNTSLFDRDHIMGVRKRDIEFIVSSGPRSERQKANSQRSLGE
LTRDWRNDPCSTPARRRRLINDVCKVIVRSYEHASVIRVVDFRQQTAVAT
KLQAIARMRAARTRYAAKISARRARAALCLQLAWLSHIARNRLWVLRDER
DRVRRAKQLTRAREDILRWKEESAKAEREKNETAGRRHRLELATLLQRRF
RSLQERRRRQRELDVAKAAIILQTALRIRRESIRFGKCARRYRQAQQQKD
RAMASSRLIQVAWRQQKAKYKLSGNGRAALSVLYPNLSSLKITSAPSTRD
DGDQRSSEQSISDPSEKQLSVRDLNDSISQDKEDTTAAPWEKWAERSPLV
KAEGLDMTHYLNERDVRPRTAAAAVESKPLPIQMPISSATRHPAGMMTVK
VKIGKEETSLVTPIVVTENDDTEVSVSESAERRGPRENSHGFAKQNDTDS
RVMHGESIPALGEITGATTAGRCQTPVVPASTTQESFLHFDETPAVQGIA
DVLPMVFPLTGTAPEHAETLNPVGVPGTLNPGGVASDKSMTHNNHPDAQP
ILPVPPVATMARRNPLRATTKINERIYPVEGSEVDVHPRQVVTSVDSFME
DSQVYLGCSFCGVKFLVEAVDARLPESVQGQPTPEVLYLCTTCGGTLRQG
EDGRWRRRRRPSSAPAATRRRNFFLNMPSHAPNVPDSGGRGHAAVNGDDC
EERRENQRGVGAHHIDTGERMLKFRYACCASQIQHTYQNFRHRQYLRDWA
LALVSERTLSAGFVYPTRLSFFAI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
IPR000048IQ_motif_EF-hand-BS
IPR036034PDZ_sf