mRNA_H-paniculata_contig1888.4710.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1888.4710.1
Unique NamemRNA_H-paniculata_contig1888.4710.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig1888.4710.1 vs. uniprot
Match: A0A6H5KAU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAU4_9PHAE)

HSP 1 Score: 454 bits (1169), Expect = 7.540e-151
Identity = 244/425 (57.41%), Postives = 288/425 (67.76%), Query Frame = 1
Query:  355 FIDDSVDKLKPRTGEVLCNLQSKLIFVLLFALHKDGVSENQSVLQVASTFKIDHSKVRDVNKHWWDNNTLLETIGEGRGKVTKNDDGRRRLTQDQEDQLYKLINDEHKAGRQVFRRTVAEWMMEYCNPDKEVSNRAVGGLLQRLGYRRHRGRIKTPPLDTKRLAHIRLFLVEMDIAKRAEDAGLAVLVYMDECFVHQAHGSAYSYFPTDENGVVDDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKENGRGKQGGKDFNMADEKTAEFLWQAKLAKGDYHAAMTDTMFMEWHEHRLTPGFQR*P*VQGQED----DPGS*QRLVPSWFRLGSQGAGNQ*QGVQ----CRTVA*VWGRGNHGEACRCQRHSCGAPLRGTNRTWFFVP*CEAGGRC*QRGGSVGHSRVFPPSLP 1605
            ++D SV ++KP+  EV   LQS+++ +LLF L K G  EN++VLQVA TFKI H KVR +N HWWD+  L ET   GRGK  K DDGRRRLT+ QEDQL + INDEHKAGRQVFRRTVAEWM   CN + + SNR+ GGLL RLGY+R RGRIKTPPL+ +RLA IR FLVEMD+AKRAEDAGLAV+VYMDE FVHQAHGS  SYFP+DE+GVV DG+GRTTGKGLRMIMVHAITKWGPL        FPIEEGWFK  E G GK+      M DE+TAEFLWQ KLAKGD HAAMTD+MFMEW EHRL P +   P  +G+      D  S      +  ++           +      ++++     G  G          G  LRGT+R WFF+P  E GGRC Q GGS GHS ++PP  P
Sbjct:   56 YMDTSVHEVKPKKDEVWTQLQSRMVLMLLFDLRKGGCCENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPCSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCYG--FPIEEGWFK--ETGSGKK-----EMEDEETAEFLWQVKLAKGDNHAAMTDSMFMEWLEHRLNPAYNAIPEFKGKRMILVLDNASYHHEFDAEVKVPESNTKKHNVDLLRMFGAKSISVKRKEGEQGVV--------GVQLRGTDRAWFFIPCREQGGRCKQSGGSNGHSGIYPPQSP 462          
BLAST of mRNA_H-paniculata_contig1888.4710.1 vs. uniprot
Match: A0A6H5JMA8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA8_9PHAE)

HSP 1 Score: 448 bits (1153), Expect = 7.820e-148
Identity = 270/486 (55.56%), Postives = 320/486 (65.84%), Query Frame = 1
Query:    1 MGKTKGRRQPTGGAPVRPSSVAKRAKPGAARDAQALDRLRVQLEEQKAALAALKAEVESREKAVKAKKVAIAKKEANKERVAAKQQXXXXXXXXREQKLVEA--AAHAAQQPKL*QAAHTFIDDSVDKLKPRTGEVLCNLQSKLIFVLLFALHKDGVSENQSVLQVASTFKIDHSKVRDVNKHWWDNNTLLETIGEGRGKVTKNDDGRRRLTQDQEDQLYKLINDEHKAGRQVFRRTVAEWMMEYCNPDKEVSNRAVGGLLQRLGYRRHRGRIKTPPLDTKRLAHIRLFLVEMDIAKRAEDAGLAVLVYMDECFVHQAHGSAYSYFPTDENGVVDDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKENGRGKQGGKDFNMADEKTAEFLWQAKLAKGDYHAAMTDTMFMEWHEHRLTPGFQR*P*VQGQEDDPGS*QRLVPSWFRLGSQGAGNQ*QGVQCRTVA*VWGRGNHG 1452
            M K KGRRQPTGG   RPS   KRAK  AAR   A +RL+ +LE+Q+AALAA +                         R AA ++        REQ+ VE   AA AA   K+ Q    ++D SV ++KP+ GEV   LQS+++ +LLF L K G SE ++VL+VA TFKI H KVR +N HWWD+  L ET   GRGK  K DDGRRRLT+ QEDQL + INDEHKAGRQVFRRTVAEWM   CN + + SN + GGLL RLG +R RGRIKTPPL  +RLA IR FLVEM +AKRAEDAGLAV+VY+DE FVHQAHGS YSYFP+D++GVV DG+GRTTGKGLRMIMVHAITKWGPL      +  PIEEGWFK  E G GK+      M DE+T EFLWQA LAKGDYHAAMTD+MFMEW EHRL+P +   P  +G+              F    + AGNQ Q  Q R+VA VWG+ + G
Sbjct:   37 MAKPKGRRQPTGGVVGRPSKSDKRAKTAAARGPLAQERLQAELEQQRAALAADRXXXXXXXXXXXXXXXXXXXXXXEMARAAAPREM-------REQQDVERVQAAAAAAAEKVAQGLD-YMDTSVHEVKPKKGEVWTQLQSRMVLMLLFDLRKGGCSEKEAVLKVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNGSAGGLLSRLGCKRRRGRIKTPPLKAERLARIRRFLVEMVMAKRAEDAGLAVIVYVDESFVHQAHGSPYSYFPSDDDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGLPIEEGWFK--ETGSGKK-----EMEDEETVEFLWQATLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMVLVLDYASYHHGFDAEVKSAGNQHQEAQRRSVAYVWGQVDQG 504          
BLAST of mRNA_H-paniculata_contig1888.4710.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI)

HSP 1 Score: 436 bits (1121), Expect = 1.020e-140
Identity = 220/323 (68.11%), Postives = 258/323 (79.88%), Query Frame = 1
Query:  355 FIDDSVDKLKPRTGEVLCNLQSKLIFVLLFALHKDGVSENQSVLQVASTFKIDHSKVRDVNKHWWDNNTLLETIGEGRGKVTKNDDGRRRLTQDQEDQLYKLINDEHKAGRQVFRRTVAEWMMEYCNPDKEVSNRAVGGLLQRLGYRRHRGRIKTPPLDTKRLAHIRLFLVEMDIAKRAEDAGLAVLVYMDECFVHQAHGSAYSYFPTDENGVVDDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKENGRGKQGGKDFNMADEKTAEFLWQAKLAKGDYHAAMTDTMFMEWHEHRLTPGFQR*P*VQGQE 1323
            ++D SV ++KP+ GEV  +LQS+++ +LLF L K+G SEN++VLQVA TFKI H KVR +N HWWD+  L ET   GRGK+ K DDGRRRLT+ Q DQL + INDEHKAGRQVFRRTVAEW+   CN + + SNR+VGGLL RLGY+R RGRIKTPPL+ +RLA IR FLVEMD+AKRAEDAGLAV+VYMDE FVHQAHGS YSYFP+DENGVV DG+GRTTGKGLRMIMVHAITKWGPL      + FPIEEGWFK  E G GK+      M DE+TAEFLWQAKLAKGDYHAAMTD+MFMEW EHRL+P +   P  +G++
Sbjct:  117 YMDTSVHEVKPKKGEVWTHLQSRMVLMLLFDLRKEGRSENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAAGRGKMAKEDDGRRRLTEVQADQLREFINDEHKAGRQVFRRTVAEWVHRTCNME-QPSNRSVGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDENGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--FCDGFPIEEGWFK--ETGSGKK-----KMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFEGKK 429          
BLAST of mRNA_H-paniculata_contig1888.4710.1 vs. uniprot
Match: A0A6H5KIM5_9PHAE (DDE_3 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIM5_9PHAE)

HSP 1 Score: 408 bits (1049), Expect = 2.060e-130
Identity = 237/440 (53.86%), Postives = 274/440 (62.27%), Query Frame = 1
Query:    1 MGKTKGRRQPTGGAPVRPSSVAKRAKPGAARDAQALDRLRVQLEEQKAALAALKAEVESREKAVKAKKVAIAKKEANKERVAAKQQXXXXXXXXREQKLVEAAAHAAQQPKL*QAAHTFIDDSVDKLKPRTGEVLCNLQSKLIFVLLFALHKDGVSENQSVLQVASTFKIDHSKVRDVNKHWWDNNTLLETIGEGRGKVTKNDDGRRRLTQDQEDQLYKLINDEHKAGRQVFRRTVAEWMMEYCNPDKEVSNRAVGGLLQRLGYRRHRGRIKTPPLDTKRLAHIRLFLVEMDIAKRAEDAGLAVLVYMDECFVHQAHGSAYSYFPTDENGVVDDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKENGRGKQGGKDFNMADEKTAEFLWQAKLAKGDYHAAMTDTMFMEWHEHRLTPGFQR*P*VQGQ 1320
            M K KGRRQPTGG   RPS   KRAK  AAR   A +RL+ +LE+Q+AALAA +                                                                                    +S+++ +LLF L K G SE ++VL+VA TFKI H KVR +N HWWD+  L E    GRGK  K DDGRRRLT+ QEDQL + INDEHKAGRQVFRRTVAEWM   CN + + SNR+ GGLL RLGY+R RGRIKTPPL+ +RLA IR FLVEM +AKRAEDAGLAV+VYMDE FVHQAHGS YSYFP+DE+GVV DG+GRTTGKGLRMIMVHAITKWGPL      +  PIEEGWFK  E G GK+      M DE+TAEFLWQAKLAKGDYHAAMTD+MFMEW EHRL+P +   P  +G+
Sbjct:   12 MAKPKGRRQPTGGVVGRPSKSDKRAKTAAARGPLAQERLQAELEQQRAALAADR-----------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESRMVLMLLFDLRKGGCSEKEAVLKVARTFKIGHDKVRRINNHWWDHRQLYEITAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMVMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGLPIEEGWFK--ETGSGKK-----EMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGK 394          
BLAST of mRNA_H-paniculata_contig1888.4710.1 vs. uniprot
Match: A0A6H5KKL0_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKL0_9PHAE)

HSP 1 Score: 393 bits (1009), Expect = 9.530e-127
Identity = 201/299 (67.22%), Postives = 231/299 (77.26%), Query Frame = 1
Query:  424 LIFVLLFALHKDGVSENQSVLQVASTFKIDHSKVRDVNKHWWDNNTLLETIGEGRGKVTKNDDGRRRLTQDQEDQLYKLINDEHKAGRQVFRRTVAEWMMEYCNPDKEVSNRAVGGLLQRLGYRRHRGRIKTPPLDTKRLAHIRLFLVEMDIAKRAEDAGLAVLVYMDECFVHQAHGSAYSYFPTDENGVVDDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKENGRGKQGGKDFNMADEKTAEFLWQAKLAKGDYHAAMTDTMFMEWHEHRLTPGFQR*P*VQGQ 1320
            ++ +LLF L K+G +EN++VLQVA TFKI H KVR +N HWWD+  L ET   GRGK  K DDGRRRLT+ QEDQL + INDEHKAGRQVFRRTVAEWM   CN + + SNR+  GLL RLGY+  RGRIKTPPL+ +RLA IR FLVEMD+AKRAEDAGLAV+VY+D  FVHQAHGS YSYFP DE+ VV DG+GRTTGKGLR+IMVHAITKWGPL         PIEEGWFK  E G GK+      M DE+TAEFLWQAKLAKGDYHAAMTD+MFMEW EHRL+P +   P  +G+
Sbjct:    1 MVLMLLFDLRKEGRAENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNRSAEGLLSRLGYKGRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYIDGSFVHQAHGSPYSYFPADEDEVVQDGIGRTTGKGLRVIMVHAITKWGPLAKLCVG--LPIEEGWFK--ETGSGKR-----EMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGK 289          
BLAST of mRNA_H-paniculata_contig1888.4710.1 vs. uniprot
Match: A0A6H5KDX7_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX7_9PHAE)

HSP 1 Score: 387 bits (994), Expect = 2.540e-124
Identity = 197/279 (70.61%), Postives = 221/279 (79.21%), Query Frame = 1
Query:  484 LQVASTFKIDHSKVRDVNKHWWDNNTLLETIGEGRGKVTKNDDGRRRLTQDQEDQLYKLINDEHKAGRQVFRRTVAEWMMEYCNPDKEVSNRAVGGLLQRLGYRRHRGRIKTPPLDTKRLAHIRLFLVEMDIAKRAEDAGLAVLVYMDECFVHQAHGSAYSYFPTDENGVVDDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKENGRGKQGGKDFNMADEKTAEFLWQAKLAKGDYHAAMTDTMFMEWHEHRLTPGFQR*P*VQGQ 1320
            +QVA TFKI H KVR +N HWWD+  L ET   GRGK  K DDGRRRLT+ QEDQL + INDEHKAGRQVFRRTVAEWM   CN + + SNR+ GGLL RLGY+R RGRIKTPPL+ +RLA IR FLVEMD+AKRAEDAGLAV+VYMDE FVHQAHGS YSYFP+DE+GVV DG+GRTTGKGLRMIMVHAITKWGPL      +  PIEEGWFK  E G GK+      M DE+TAEFLWQAKLAKGDYHAAMTD+MFMEW EHRL+P +   P  +G+
Sbjct:    9 VQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGLPIEEGWFK--ETGSGKK-----EMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGK 277          
BLAST of mRNA_H-paniculata_contig1888.4710.1 vs. uniprot
Match: A0A6H5K024_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K024_9PHAE)

HSP 1 Score: 385 bits (989), Expect = 8.730e-123
Identity = 185/262 (70.61%), Postives = 211/262 (80.53%), Query Frame = 2
Query: 1280 LPQAFNANPEFRGKKMILVLDNASYHHGFDSEVKVPETNNKVYNVGLLRKYGAGAITVKRAAANGTVVEHRFEVPTEPGSSFPDARRAGGVSREEVALATREFFRLHYPEKLEERVETFMRQKGWELIWTPPYMPSFQPIELFWQHGKQYVSFNFQLKRKMHEVWEQIRKGWYGDPTRPGQEGGWNAADCSKLVAHTIGEMNKWIKDCHGQLRGTIGNLEVPQGYDQDDVSRVNEADDGLGEQLEQDGDEWDMGDGNDGIEP 2065
            L  A+NA PEF+GK+MILVLDNASYHHGFD+EVKVPETN K +NV LLR +GA +I V+R      VVE+  EVPTEPGSSFP   R GGVSR EVA ATRE+  L++PE+LEERV TFMR+KGW LIWTPPYMPSFQPIELFWQHGKQYVS NF+LKRKM EVW QIRKGWYGD   PGQEGGW AADCSKLV H IGEMNKW+KD  G L GTIG+LE P GYD DDVS V + ++G+GEQ++Q+  EW  GDG+D +EP
Sbjct:  280 LSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNLEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLEKPDGYDTDDVSPVGDVEEGVGEQIQQESAEW--GDGSDEVEP 539          
BLAST of mRNA_H-paniculata_contig1888.4710.1 vs. uniprot
Match: A0A6H5KHE7_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE7_9PHAE)

HSP 1 Score: 376 bits (965), Expect = 1.350e-121
Identity = 182/262 (69.47%), Postives = 210/262 (80.15%), Query Frame = 2
Query: 1280 LPQAFNANPEFRGKKMILVLDNASYHHGFDSEVKVPETNNKVYNVGLLRKYGAGAITVKRAAANGTVVEHRFEVPTEPGSSFPDARRAGGVSREEVALATREFFRLHYPEKLEERVETFMRQKGWELIWTPPYMPSFQPIELFWQHGKQYVSFNFQLKRKMHEVWEQIRKGWYGDPTRPGQEGGWNAADCSKLVAHTIGEMNKWIKDCHGQLRGTIGNLEVPQGYDQDDVSRVNEADDGLGEQLEQDGDEWDMGDGNDGIEP 2065
            L  A+NA PEF+GK+MILVLDNASYHHGFD++VK+PE+N K +NV LLR +GA +I VKR      V  + FEVPTEPGSSFP   R GGVSR EVA ATRE+  L++PE+LEERV TFMR+KGW LIWTPPYMPSFQPIELFWQHGKQYVS NF+LKRKM EVW QIRKGWYGD   PGQEGGW AADCSKLV H IGEMNKW+KD  G L GTIG+LE P GYD DDVS V + ++G+GEQ++Q+  EW  GDG+D +EP
Sbjct:  111 LNPAYNAIPEFKGKRMILVLDNASYHHGFDAQVKLPESNTKKHNVDLLRMFGAKSIRVKRKEGEQGV--YNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLEKPDGYDTDDVSPVGDVEEGVGEQIQQESAEW--GDGSDEVEP 368          
BLAST of mRNA_H-paniculata_contig1888.4710.1 vs. uniprot
Match: A0A6H5JR41_9PHAE (DDE_3 domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR41_9PHAE)

HSP 1 Score: 385 bits (989), Expect = 2.330e-121
Identity = 186/262 (70.99%), Postives = 211/262 (80.53%), Query Frame = 2
Query: 1280 LPQAFNANPEFRGKKMILVLDNASYHHGFDSEVKVPETNNKVYNVGLLRKYGAGAITVKRAAANGTVVEHRFEVPTEPGSSFPDARRAGGVSREEVALATREFFRLHYPEKLEERVETFMRQKGWELIWTPPYMPSFQPIELFWQHGKQYVSFNFQLKRKMHEVWEQIRKGWYGDPTRPGQEGGWNAADCSKLVAHTIGEMNKWIKDCHGQLRGTIGNLEVPQGYDQDDVSRVNEADDGLGEQLEQDGDEWDMGDGNDGIEP 2065
            L  A+NA PEF+GK+MILVLDNASYHHGF SEVKVPETN K +NV LLR +GA +I V+R      VVE+ FEVPTEPGSSFP   R GGVSR EVA ATRE+  L++PE+LEERV TFMR+KGW LIWTPPYMPSFQPIELFWQHGKQYVS NF+LKRKM EVW QIRKGWYGD   PGQEGGW AADCSKLV H IGEMNKW+KD  G L GTIG+LE P GYD DDVS V + ++G+GEQ++Q+  EW  GDG+D +EP
Sbjct:  391 LSPAYNAIPEFKGKRMILVLDNASYHHGFVSEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLEKPDGYDTDDVSPVGDVEEGVGEQIQQESAEW--GDGSDEVEP 650          
BLAST of mRNA_H-paniculata_contig1888.4710.1 vs. uniprot
Match: A0A6H5KDX2_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX2_9PHAE)

HSP 1 Score: 384 bits (985), Expect = 7.090e-121
Identity = 207/339 (61.06%), Postives = 247/339 (72.86%), Query Frame = 1
Query:  283 REQKLVEAAAHAAQQPKL*QAAHTFIDDSVDKLKPRTGEVLCNLQSKLIFVLLFALHKDGVSENQSVLQVASTFKIDHSKVRDVNKHWWDNNTLLETIGEGRGKVTKNDDGRRRLTQDQEDQLYKLINDEHKAGRQVFRRTVAEWMMEYCNPDKEVSNRAVGGLLQRLGYRRHRGRIKTPPLDTKRLAHIRLFLVEMDIAKRAEDAGLAVLVYMDECFVHQAHGSAYSYFPTDENGVVDDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKENG--RGKQGGKDFNMADEKTAEFLWQAKLAKGDYHAAMTDTMFMEWHEHRLTPGF 1293
            REQ  V  AA AA   KL   A  F++DSV  L+P+TGE+    QS++I +L F L K G SEN +  QVA T +I   KV  V   W+D   L ET G+GRGK T  DDGRR +T++QED L + I  EH+AGRQVFRRTV +++   C+   E+SNRAVGGLLQRLG++R RGRIK PPL+ +R   IRLFLV+MD+AKRAEDAG+AV+VYMDE FVHQAHGSAYSYFP+D+ G+V DG+GRTTGKGLRMIMVHAIT+ GPL        FPI EGWFK KEN   + K G  DF M+DE+TAEFLWQAKLA GDYH AMTD MFM+W +HRLTP F
Sbjct:   60 REQDRVSKAAEAATS-KLPPLALKFVEDSVQSLRPKTGELTTLQQSRIILMLYFDLVKGGSSENHAKEQVAKTLRIGTDKVLAVRTLWYDKQELYETNGKGRGKATSVDDGRRVITKEQEDGLREFIKGEHEAGRQVFRRTVKDYLE--CSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGIAVIVYMDESFVHQAHGSAYSYFPSDDKGIVQDGIGRTTGKGLRMIMVHAITEHGPLAE--LQEGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAF 393          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1888.4710.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KAU4_9PHAE7.540e-15157.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMA8_9PHAE7.820e-14855.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNM6_ECTSI1.020e-14068.11DDE_3 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5KIM5_9PHAE2.060e-13053.86DDE_3 domain-containing protein n=4 Tax=Ectocarpus... [more]
A0A6H5KKL0_9PHAE9.530e-12767.22DDE_3 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5KDX7_9PHAE2.540e-12470.61DDE_3 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K024_9PHAE8.730e-12370.61DDE_3 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KHE7_9PHAE1.350e-12169.47DDE_3 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5JR41_9PHAE2.330e-12170.99DDE_3 domain-containing protein n=5 Tax=Ectocarpus... [more]
A0A6H5KDX2_9PHAE7.090e-12161.06Uncharacterized protein n=8 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1888contigH-paniculata_contig1888:20803..23423 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size2068
Cds size801
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1888.4710.1prot_H-paniculata_contig1888.4710.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1888 20803..21603 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929451.2898817-CDS-H-paniculata_contig1888:20802..216031622929451.2898817-CDS-H-paniculata_contig1888:20802..21603Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1888 20803..21603 -
1691480867.134483-CDS-H-paniculata_contig1888:20802..216031691480867.134483-CDS-H-paniculata_contig1888:20802..21603Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1888 20803..21603 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929451.3041754-UTR-H-paniculata_contig1888:21603..223811622929451.3041754-UTR-H-paniculata_contig1888:21603..22381Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1888 21604..22381 -
1691480867.1436815-UTR-H-paniculata_contig1888:21603..223811691480867.1436815-UTR-H-paniculata_contig1888:21603..22381Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1888 21604..22381 -
1622929451.318767-UTR-H-paniculata_contig1888:22934..234231622929451.318767-UTR-H-paniculata_contig1888:22934..23423Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1888 22935..23423 -
1691480867.1516557-UTR-H-paniculata_contig1888:22934..234231691480867.1516557-UTR-H-paniculata_contig1888:22934..23423Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1888 22935..23423 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1888.4710.1

>prot_H-paniculata_contig1888.4710.1 ID=prot_H-paniculata_contig1888.4710.1|Name=mRNA_H-paniculata_contig1888.4710.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=267bp
MNTALPQAFNANPEFRGKKMILVLDNASYHHGFDSEVKVPETNNKVYNVG
LLRKYGAGAITVKRAAANGTVVEHRFEVPTEPGSSFPDARRAGGVSREEV
ALATREFFRLHYPEKLEERVETFMRQKGWELIWTPPYMPSFQPIELFWQH
GKQYVSFNFQLKRKMHEVWEQIRKGWYGDPTRPGQEGGWNAADCSKLVAH
TIGEMNKWIKDCHGQLRGTIGNLEVPQGYDQDDVSRVNEADDGLGEQLEQ
DGDEWDMGDGNDGIEP*
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mRNA from alignment at H-paniculata_contig1888:20803..23423-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1888.4710.1 ID=mRNA_H-paniculata_contig1888.4710.1|Name=mRNA_H-paniculata_contig1888.4710.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2621bp|location=Sequence derived from alignment at H-paniculata_contig1888:20803..23423- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGGAAGACGAAGGGCAGGCGCCAACCCACTGGTGGCGCCCCTGTCCG CCCGAGCAGCGTGGCGAAAAGGGCCAAACCTGGTGCGGCGAGAGATGCTC AGGCTCTCGACAGACTCAGGGTTCAGCTTGAGGAGCAGAAGGCAGCGCTA GCGGCGCTCAAGGCGGAGGTGGAGTCGAGGGAGAAAGCTGTCAAGGCGAA AAAGGTAGCGATTGCCAAGAAGGAGGCAAACAAAGAGCGCGTCGCTGCAA AGCAGCAAGCGAAACAGCAAGCGCACGAACAGCGAGAGCAGAAGCTAGTC GAAGCGGCTGCTCACGCAGCACAGCAGCCGAAGCTTTAACAGGCAGCCCA CACCTTCATCGACGACTCTGTGGACAAGTTGAAGCCTCGAACTGGCGAGG TCTTGTGCAATCTCCAGTCGAAGCTGATTTTCGTGCTGTTGTTTGCTCTT CACAAGGACGGCGTCTCTGAGAATCAATCGGTGCTCCAGGTCAGTACGAG CGAGTAGAGTGAGCAAGTTTATTTAATATTGATATTACAAGTGTCTGTTT TGTATTGCTTACAGTATGCTGTACAGCAGCAGTTTTTGCGGCATGTTAAT TTGAATCATGTCTTTTCGCGCCCTTTTCGGTGTTGCTGTTCATACACCTC TGAGTGTACAAGGTACTGCTGTCTGTACGAACACGGTTGCACTGCTGTCT GCTGTACTCTGCGCACCGCTGTTCGTACGGTTCGTAACACTGCTGTCTGT ACGGTGCATACTGCTGTCCGCACAGTGCACACAGCTGCCTGTACGGTTGT GCACTGCTGTGTGTACCGTACAACGGTGAGTTCGCTGTCTCCCAAATCCT CACCATGTACCCACGGCGATAACGCTGTTACGCATGGCGCCGCATGCGCA TTTTCTTCCAAGGCTGTACGCTGTTAAACTTCTGCTCTCTGCTTGCACAG CTTGAGGTGTGCTGTCTTGGCAATTGCACTGACTGTACTCCCGTATGCCG ATGCAATACGCGCTGGGCTCTGGACAACTGAACGTCTGCCAGGTGGCGAG CACCTTCAAGATCGACCATTCGAAAGTCAGAGACGTCAACAAGCACTGGT GGGACAACAACACCCTGTTGGAAACCATCGGCGAAGGAAGAGGCAAGGTC ACCAAGAACGACGACGGCCGACGGCGTCTCACCCAAGATCAGGAGGATCA GCTATACAAGCTTATCAACGACGAGCACAAAGCCGGGCGACAAGTCTTTC GCCGTACGGTGGCGGAGTGGATGATGGAGTACTGCAACCCAGACAAGGAG GTGTCAAACCGCGCGGTAGGAGGGTTGCTGCAGAGGCTCGGTTATAGGCG CCACAGGGGTAGGATCAAAACACCCCCGTTGGATACGAAGAGGCTCGCGC ATATTCGTCTATTTCTCGTTGAAATGGACATTGCGAAAAGGGCAGAGGAT GCGGGGCTGGCAGTTCTTGTGTACATGGATGAGTGTTTTGTCCACCAGGC GCACGGTTCCGCGTATTCATACTTTCCGACTGACGAGAATGGGGTTGTAG ATGATGGGATGGGTCGCACGACGGGAAAGGGCTTACGCATGATTATGGTG CATGCGATCACGAAGTGGGGCCCGTTGGTTGCGCGTGGTACCAATAATGA CTTTCCAATCGAAGAGGGTTGGTTTAAGCGTAAGGAAAACGGTAGGGGAA AGCAAGGGGGTAAGGACTTTAACATGGCAGATGAGAAAACAGCAGAGTTT CTGTGGCAAGCCAAGTTGGCTAAGGGTGATTATCACGCGGCTATGACCGA TACGATGTTCATGGAGTGGCATGAACACCGCCTTACCCCAGGCTTTCAAC GCTAACCCTGAGTTCAGGGGCAAGAAGATGATCCTGGTTCTTGACAACGC CTCGTACCATCATGGTTTCGACTCGGAAGTCAAGGTGCCGGAAACCAATA ACAAGGTGTACAATGTCGGACTGTTGCGTAAGTATGGGGCAGGGGCAATC ACGGTGAAGCGTGCCGCTGCCAACGGCACAGTTGTGGAGCACCGCTTCGA GGTACCAACAGAACCTGGTTCTTCGTTCCCTGATGCGAGGCGGGCGGGCG GTGTTAGCAGAGAGGAGGTAGCGTTGGCCACTCGAGAGTTTTTCCGCCTT CACTACCCTGAAAAGCTTGAGGAGCGGGTGGAGACGTTCATGCGGCAGAA GGGGTGGGAGTTGATTTGGACACCGCCTTACATGCCGTCTTTTCAGCCGA TAGAGTTGTTTTGGCAGCATGGTAAGCAGTACGTGAGCTTCAACTTTCAG CTGAAGCGAAAAATGCACGAGGTGTGGGAGCAGATCCGCAAAGGTTGGTA CGGGGACCCGACGCGACCAGGGCAGGAGGGGGGGTGGAATGCAGCCGATT GTTCGAAGTTGGTGGCGCACACCATTGGCGAGATGAACAAGTGGATCAAG GATTGTCATGGACAGCTGCGTGGTACGATAGGTAACCTTGAAGTTCCACA AGGGTATGATCAGGACGATGTATCACGTGTGAACGAGGCCGATGATGGGT TGGGGGAGCAGCTGGAACAGGATGGCGATGAGTGGGATATGGGGGACGGC AACGATGGGATTGAGCCATGA
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Coding sequence (CDS) from alignment at H-paniculata_contig1888:20803..23423-

>mRNA_H-paniculata_contig1888.4710.1 ID=mRNA_H-paniculata_contig1888.4710.1|Name=mRNA_H-paniculata_contig1888.4710.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1602bp|location=Sequence derived from alignment at H-paniculata_contig1888:20803..23423- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAACACCGCCTTACCCCAGGCTTTCAACGCTAACCCTGAGTTCAGGGG
CAAGAAGATGATCCTGGTTCTTGACAACGCCTCGTACCATCATGGTTTCG
ACTCGGAAGTCAAGGTGCCGGAAACCAATAACAAGGTGTACAATGTCGGA
CTGTTGCGTAAGTATGGGGCAGGGGCAATCACGGTGAAGCGTGCCGCTGC
CAACGGCACAGTTGTGGAGCACCGCTTCGAGGTACCAACAGAACCTGGTT
CTTCGTTCCCTGATGCGAGGCGGGCGGGCGGTGTTAGCAGAGAGGAGGTA
GCGTTGGCCACTCGAGAGTTTTTCCGCCTTCACTACCCTGAAAAGCTTGA
GGAGCGGGTGGAGACGTTCATGCGGCAGAAGGGGTGGGAGTTGATTTGGA
CACCGCCTTACATGCCGTCTTTTCAGCCGATAGAGTTGTTTTGGCAGCAT
GGTAAGCAGTACGTGAGCTTCAACTTTCAGCTGAAGCGAAAAATGCACGA
GGTGTGGGAGCAGATCCGCAAAGGTTGGTACGGGGACCCGACGCGACCAG
GGCAGGAGGGGGGGTGGAATGCAGCCGATTGTTCGAAGTTGGTGGCGCAC
ACCATTGGCGAGATGAACAAGTGGATCAAGGATTGTCATGGACAGCTGCG
TGGTACGATAGGTAACCTTGAAGTTCCACAAGGGTATGATCAGGACGATG
TATCACGTGTGAACGAGGCCGATGATGGGTTGGGGGAGCAGCTGGAACAG
GATGGCGATGAGTGGGATATGGGGGACGGCAACGATGGGATTGAGCCATG
AATGAACACCGCCTTACCCCAGGCTTTCAACGCTAACCCTGAGTTCAGGG
GCAAGAAGATGATCCTGGTTCTTGACAACGCCTCGTACCATCATGGTTTC
GACTCGGAAGTCAAGGTGCCGGAAACCAATAACAAGGTGTACAATGTCGG
ACTGTTGCGTAAGTATGGGGCAGGGGCAATCACGGTGAAGCGTGCCGCTG
CCAACGGCACAGTTGTGGAGCACCGCTTCGAGGTACCAACAGAACCTGGT
TCTTCGTTCCCTGATGCGAGGCGGGCGGGCGGTGTTAGCAGAGAGGAGGT
AGCGTTGGCCACTCGAGAGTTTTTCCGCCTTCACTACCCTGAAAAGCTTG
AGGAGCGGGTGGAGACGTTCATGCGGCAGAAGGGGTGGGAGTTGATTTGG
ACACCGCCTTACATGCCGTCTTTTCAGCCGATAGAGTTGTTTTGGCAGCA
TGGTAAGCAGTACGTGAGCTTCAACTTTCAGCTGAAGCGAAAAATGCACG
AGGTGTGGGAGCAGATCCGCAAAGGTTGGTACGGGGACCCGACGCGACCA
GGGCAGGAGGGGGGGTGGAATGCAGCCGATTGTTCGAAGTTGGTGGCGCA
CACCATTGGCGAGATGAACAAGTGGATCAAGGATTGTCATGGACAGCTGC
GTGGTACGATAGGTAACCTTGAAGTTCCACAAGGGTATGATCAGGACGAT
GTATCACGTGTGAACGAGGCCGATGATGGGTTGGGGGAGCAGCTGGAACA
GGATGGCGATGAGTGGGATATGGGGGACGGCAACGATGGGATTGAGCCAT
GA
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