mRNA_H-paniculata_contig1888.4709.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1888.4709.1 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI) HSP 1 Score: 196 bits (499), Expect = 5.350e-47 Identity = 97/223 (43.50%), Postives = 133/223 (59.64%), Query Frame = 2
Query: 302 YTHLGCFNDVEADRILKLE-MKSDSMTPSLCCDSCAILGAAFCATQYGTECWCTSDRSLDYTRHG-VGKCDYWCAGDPNTTCGGYKTFEVYSIEPLASHMTSNYIGCFADSPVDRIFTDKLIDREGMTPAMCETHCTLDKSTSGYYAVQWGNECWCGIKKSAGEYERHGRGACNIPCAGDPSALCGGYYSFDLFTY--GGSPEPEXXXXXXXDTPADTLAPSA 958
Y H+GCF D ++DR+L+ + S MT LC ++C+ GAA+ ATQ+G ECWC+ D SLDY RHG G CDY C GD + TCGG +F +Y + + Y+GC+ D+ DR+ +D +I + MT A+C HC DK YY Q+ +ECWCG +YERHG G C++ C+GD + CGGY ++ LF Y GG DTP T+AP+A
Sbjct: 1145 YEHVGCFQDSQSDRVLQRSGLISGDMTAELCYETCSTKGAAYMATQWGVECWCSRDGSLDYDRHGDTGVCDYPCRGDESETCGGVHSFNLYRLSWAPAPEDEEYVGCYTDNKGDRVLSD-MISSDDMTAAVCREHCA-DKDAP-YYGTQFSSECWCGTSDDDADYERHGEGVCHMACSGDGTVACGGYDAYSLFKYDNGGEAPTTAPVTDSPDTP--TMAPTA 1362
BLAST of mRNA_H-paniculata_contig1888.4709.1 vs. uniprot
Match: A0A6H5JJ37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ37_9PHAE) HSP 1 Score: 173 bits (439), Expect = 5.010e-40 Identity = 79/174 (45.40%), Postives = 106/174 (60.92%), Query Frame = 2
Query: 365 SDSMTPSLCCDSCAILGAAFCATQYGTECWCTSDRSLDYTRHG-VGKCDYWCAGDPNTTCGGYKTFEVYSIEPLASHMTSNYIGCFADSPVDRIFTDKLIDREGMTPAMCETHCTLDKSTSGYYAVQWGNECWCGIKKSAGEYERHGRGACNIPCAGDPSALCGGYYSFDLFTY 883
S MT LC ++C+ GAA+ ATQ+G ECWC+ D SLDY RHG G CDY C GD + TCGG +F +Y + + Y+GC+ADS DR+ D +I + MT +C HC DK YY Q+ +ECWCG +YERHG G C++ C+GD + CGGY ++ LF +
Sbjct: 821 SSDMTAELCYETCSAKGAAYMATQWGVECWCSRDGSLDYDRHGDTGVCDYPCIGDESETCGGVHSFNLYRLSWAPAPEDEEYVGCYADSKGDRVLFD-MISSDNMTAGVCREHCA-DKDAP-YYGTQFSSECWCGTSDDEADYERHGEGVCHMACSGDGTVACGGYDAYSLFKH 991
BLAST of mRNA_H-paniculata_contig1888.4709.1 vs. uniprot
Match: D8LED5_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED5_ECTSI) HSP 1 Score: 135 bits (340), Expect = 6.960e-30 Identity = 66/177 (37.29%), Postives = 100/177 (56.50%), Query Frame = 2
Query: 386 LCCDSCAILGAAFCATQYGTECWCTSDRSLDYTRH------GVGKCDYWCAGDPNTTCGGYKTFEVYSIEPLASHM-------TSNYIGCFADSPVDRIFTDKLIDREGMTPAMCETHCTLDKSTSGYYAVQWGNECWCGIKKSAGEYERHGRGACNIPCAGDPSALCGGYYSFDLF 877
+C + C GAA+ ATQ+G ECWC+ D LDY+RH G G C C GD TC + + ++ + Y+GCFAD P DR+ +++ + MT A+C T+C + + +YA Q+G+ECWCG+ +Y+RHG G+C + C+GDP +CGG +F+L+
Sbjct: 276 MCYEHCYSEGAAYMATQFGFECWCSDDTDLDYSRHSDNIDGGDGLCTTACQGD---TCWRERALDACAVLVDRRALLVEEGDEVDEYVGCFADDPEDRLLGNEIKYQPDMTQAVCRTYC--EGYDAHFYATQYGDECWCGMSNDEEDYKRHGSGSCLMECSGDPGTVCGGNDAFNLY 447
BLAST of mRNA_H-paniculata_contig1888.4709.1 vs. uniprot
Match: D8LDE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE3_ECTSI) HSP 1 Score: 138 bits (347), Expect = 3.000e-29 Identity = 82/214 (38.32%), Postives = 118/214 (55.14%), Query Frame = 2
Query: 257 GAQEHVTELAVSETRYTHLGCFNDVEADRILKL-EMKSDSMTPSLCCDSCAILGAAFCATQYGTECWCTSDRSLDYTRHG---VGKCDYWCAGDPNTTCGGYKTFEVYSIEPLASHMTSNYIGCFADSPVDRIF-TDKL-IDREGMTPAMCETHCTLDKSTSGYYAVQWGNECWCGIKKSAGEYERHGRGA-CNIPCAGDPSALCGGYYSFDLF 877
G +E TE A S GC+ D + DR L + M S MTP+LC + CA A+F A QYG ECWC D S DY + G + +C Y C GD + TCGG+ +FE++S L + + ++GC+AD DR+F DK+ +D G+ C C S S + +Q+G ECWCG + +Y +HG C+ PC G+ CGG+ + ++F
Sbjct: 738 GGEEEPTEPAAS-------GCYRDAKDDRRLAMGPMSSRDMTPTLCNEYCAGQYASFYAVQYGRECWCGDD-STDYAKLGALDMTECAYPCTGDGDLTCGGFDSFEIFS---LPAETSQGHLGCYADEQDDRLFRADKIRLDENGVEA--CRAAC----SGSPLFGLQYGRECWCGTEDE--DYTKHGASTDCDYPCRGNEDYTCGGFDAMNIF 932
BLAST of mRNA_H-paniculata_contig1888.4709.1 vs. uniprot
Match: A0A6H5KHF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHF5_9PHAE) HSP 1 Score: 100 bits (248), Expect = 2.840e-20 Identity = 43/99 (43.43%), Postives = 61/99 (61.62%), Query Frame = 2
Query: 302 YTHLGCFNDVEADRILKLEMKSDSMTPSLCCDSCAILGAAFCATQYGTECWCTSDRSLDYTRHGVGKCDYWCAGDPNTTCGGYKTFEVYSIEPLASHMT 598
Y ++GC+ D + DR+L ++ SD MT C + C+ +GAA+ ATQY EC+C++D LDY RHG C+ C GD TCGG F++Y I P + T
Sbjct: 21 YEYVGCYTDRQDDRVLGDKLDSDLMTADFCYEYCSEMGAAYMATQYAFECFCSADEDLDYERHGTAMCNMGCLGDEGETCGGENAFDLYKIMPSMNSPT 119
BLAST of mRNA_H-paniculata_contig1888.4709.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI) HSP 1 Score: 100 bits (250), Expect = 2.810e-18 Identity = 44/93 (47.31%), Postives = 59/93 (63.44%), Query Frame = 2
Query: 302 YTHLGCFNDVEADRILKLEMKSDSMTPSLCCDSCAILGAAFCATQYGTECWCTSDRSLDYTRHGVGKCDYWCAGDPNTTCGGYKTFEVYSIEP 580
Y ++GC+ D + DRIL ++ SD MT C + C+ +GAA+ ATQY EC+C++D LDY RHG CD C GD TCGG F++Y I P
Sbjct: 334 YEYVGCYTDRQDDRILGDKLDSDLMTADFCYEYCSEIGAAYMATQYAFECFCSADEDLDYERHGTAMCDKACRGDEGETCGGENAFDLYRIMP 426
BLAST of mRNA_H-paniculata_contig1888.4709.1 vs. uniprot
Match: A0A8I6RDE2_CIMLE (Uncharacterized protein n=2 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6RDE2_CIMLE) HSP 1 Score: 102 bits (254), Expect = 3.190e-18 Identity = 66/200 (33.00%), Postives = 98/200 (49.00%), Query Frame = 2
Query: 272 VTELAVSETRYTHLGCFNDVEA-DRILKLEMKS--DSMTPSLCCDSCAILGAAFCATQYGTECWCTSDRSLDYTRHGVGKCDYWCAGDPNTTCGGYKTFEVY-SIEPLASHMTSNYIGCFADSPVDRIFTDKLIDREG-MTPAMCETHCTLDKSTSGYYAVQWGNECWCGIKKSAGEYERHGRGACNIPCAGDPSALCGG 856
VT L +RY +GCF ++ A R+L E K+ +T C C G + TQYG EC+C+ +R C+ C G+ + CGG VY + E + ++SNYIGCF DS ++R+ + D +G +TP C + C + Y VQ + C+CG + +R C++PC GD S CGG
Sbjct: 129 VTTLTADNSRY--VGCFKEISAATRLLPNEQKNFVGDLTVEKCISHCLSKGFDYAGTQYGFECFCSQERPSFKRSANEETCNKPCDGNKHQICGGNWRLSVYETTEQARNPVSSNYIGCFYDSNLNRLLVNAYKDFDGKLTPEACVSFCY--RGGYRYAGVQHKSNCYCGSEVPLSN-KRSQETECDLPCPGDGSIYCGG 323
BLAST of mRNA_H-paniculata_contig1888.4709.1 vs. uniprot
Match: A0A1B7Y9V0_COLHI (WSC domain-containing protein n=4 Tax=Colletotrichum destructivum species complex TaxID=2707350 RepID=A0A1B7Y9V0_COLHI) HSP 1 Score: 101 bits (251), Expect = 1.040e-17 Identity = 63/218 (28.90%), Postives = 101/218 (46.33%), Query Frame = 2
Query: 257 GAQEHVTELAVSETRYTHLGCFNDVEADRILKLEMKSDSMTPSLCCDSCAILGA-AFCATQYGTECWCTSDRSLDYTRHGV-GKCDYWCAGDPNTTCGGYKTFEVYSIEPLASH-MTS------NYI--GCFADSPVDRIFTDKLIDREGMTPAMCETHCTLDKSTSGYYAVQWGNECWCGIKKSAGEYERHGRGACNIPCAGDPSALCGGYYSFDLF 877
G V++L +S YT+ GC+ + R L++ D MT +C + C+ + +YG ECWC S + T +C + C G+P CG +Y + +A+ +TS N++ GC++D + + MTP C C Y A+++G ECWCG + + CN+PCAGDP++LCGG +L+
Sbjct: 31 GQTRQVSKLTISG--YTYEGCYVEPNNGRALEIIQADDLMTLDMCAEICSASSKETYFGVEYGRECWCGSTLAPGATAAADDAECSFTCPGNPAQHCGAGSRLSLYKNDNVAAAPVTSAKPAVGNHVHQGCYSDLVQGQRALSSTSAGDDMTPESCAAFC----GRHTYMALEYGRECWCGNELDGNSQRVADQTDCNMPCAGDPTSLCGGPSRINLY 242
BLAST of mRNA_H-paniculata_contig1888.4709.1 vs. uniprot
Match: A0A167Y7F6_9PEZI (Legume lectin domain containing protein n=1 Tax=Sporothrix insectorum RCEF 264 TaxID=1081102 RepID=A0A167Y7F6_9PEZI) HSP 1 Score: 100 bits (250), Expect = 1.450e-17 Identity = 58/224 (25.89%), Postives = 96/224 (42.86%), Query Frame = 2
Query: 302 YTHLGCFNDVEADRILKLEMKSDSMTPSLCCDSCAILGAAFCATQYGTECWCTSDRSLDYTRHGVGKCDYWCAGDPNTTCGGYKTFEVYSIE--------------------PLASHMTSNYI--GCFADSPVDRIFTDKLIDREGMTPAMCETHCTLDKSTSGYYAVQWGNECWCGIKKSAGEYERHGR----GACNIPCAGDPSALCGGYYSFDLFTYGGSP 895
YT LGC+N+ R ++ + T + C S A G + +YG ECW + + D ++ C C G+ CGG +VY + P N++ GC+ ++ R + + M+ A+C T+C + Y+ V++G++C+CG +AG G C +PCAGDP+ LCGG +++ G P
Sbjct: 1156 YTFLGCYNEPPGARAFSNQLSVTNATVAKCLASAAAAGYVYAGLEYGGECWSGNSINADASQAATSACSMTCNGNHTEYCGGSLLLDVYHLAVANSTNGTTTATGTGPTATGPATKAEVGNWVYQGCYTEATNGRALSAAALANANMSYAVCATYC----ADYAYFGVEYGSQCYCGNFFAAGSVRTTAAAAAAGGCTMPCAGDPTELCGGGSRLNVYAQQGMP 1375
BLAST of mRNA_H-paniculata_contig1888.4709.1 vs. uniprot
Match: D7FU28_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU28_ECTSI) HSP 1 Score: 92.4 bits (228), Expect = 3.490e-15 Identity = 43/103 (41.75%), Postives = 62/103 (60.19%), Query Frame = 2
Query: 308 HLGCFNDVEADRILKLEMKSDSMTPSLCCDSCAILGAAFCATQYGTECWCTSDRSLDYTRH-----GVGKCDYWCAGDPNTTCGGYKTFEVYSIEPLASHMTS 601
++GCF+D + DRIL ++ S MT +C C LGAAF ATQ+G ECWC++D LDY RH CD C GD CGG+ +F++Y ++ ++ + S
Sbjct: 398 YVGCFHDNKEDRILGDKLDSVDMTTEVCLAHCTELGAAFMATQFGFECWCSADELLDYERHYQMNDADAVCDMSCRGDKTQPCGGFNSFDLYKLQTTSTVLCS 500 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1888.4709.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1888.4709.1 >prot_H-paniculata_contig1888.4709.1 ID=prot_H-paniculata_contig1888.4709.1|Name=mRNA_H-paniculata_contig1888.4709.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=475bp MTLSAAAIAFVLAPVLGSALREATLRGAQEHVTELAVSETRYTHLGCFNDback to top mRNA from alignment at H-paniculata_contig1888:2012..19735+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1888.4709.1 ID=mRNA_H-paniculata_contig1888.4709.1|Name=mRNA_H-paniculata_contig1888.4709.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=17724bp|location=Sequence derived from alignment at H-paniculata_contig1888:2012..19735+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1888:2012..19735+ >mRNA_H-paniculata_contig1888.4709.1 ID=mRNA_H-paniculata_contig1888.4709.1|Name=mRNA_H-paniculata_contig1888.4709.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2850bp|location=Sequence derived from alignment at H-paniculata_contig1888:2012..19735+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |