prot_H-paniculata_contig18842.4700.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18842.4700.1
Unique Nameprot_H-paniculata_contig18842.4700.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length97
Homology
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BLAST of mRNA_H-paniculata_contig18842.4700.1 vs. uniprot
Match: D7FXM5_ECTSI (SET domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXM5_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 7.210e-33
Identity = 53/68 (77.94%), Postives = 60/68 (88.24%), Query Frame = 0 
Query:    1 MDFTATVSYINFLNHSDQPNLSFRYSDGAYVTSRAVTRGEELCISYDRDYYPGYTAAFRARENAGSEV 68
            +DFT+T+SYINFLNHSDQPNLSFRYSDG YVTSR V RGEEL I+YDRDYYPGYTA FRARE++  + 
Sbjct:   97 LDFTSTLSYINFLNHSDQPNLSFRYSDGGYVTSRTVARGEELFINYDRDYYPGYTAGFRARESSAGDT 164
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18842.4700.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXM5_ECTSI7.210e-3377.94SET domain-containing protein n=2 Tax=Ectocarpus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.170.270.10coord: 2..55
e-value: 1.1E-8
score: 36.7
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 2..52
IPR001214SET domainPFAMPF00856SETcoord: 7..46
e-value: 6.4E-6
score: 26.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18842contigH-paniculata_contig18842:3220..4198 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18842.4700.1mRNA_H-paniculata_contig18842.4700.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18842 2715..4587 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18842.4700.1 ID=prot_H-paniculata_contig18842.4700.1|Name=mRNA_H-paniculata_contig18842.4700.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=97bp
MDFTATVSYINFLNHSDQPNLSFRYSDGAYVTSRAVTRGEELCISYDRDY
YPGYTAAFRARENAGSEVEDDTRARPQNPAVPLVADGMDSKCPPRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001214SET_dom