|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 396 |
| Cds size | 387 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig18828.4691.1 >prot_H-paniculata_contig18828.4691.1 ID=prot_H-paniculata_contig18828.4691.1|Name=mRNA_H-paniculata_contig18828.4691.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=129bp
MLELEQAEQEQERQAHHAFAYPSTGSNHLSAEPEPNWAADSSSNSNSKTK
TSTSAEGSKLTHTGIADEREDCVHGTEGVKISPSLFKQGGSIRCNTQEGG
QAQQQQQQQQLMAKMVLNGRRCLPWQACI back to topmRNA from alignment at H-paniculata_contig18828:1647..3858- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig18828.4691.1 ID=mRNA_H-paniculata_contig18828.4691.1|Name=mRNA_H-paniculata_contig18828.4691.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2212bp|location=Sequence derived from alignment at H-paniculata_contig18828:1647..3858- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCGTTCTTCATGCTGGAGTTGGAACAAGCAGAACAAGAACAAGAACGACA
AGCACATCACGCCTTCGCGTACCCTTCCACCGGTTCCAATCACCTCTCCG
CAGAACCCGAACCTAATTGGGCGGCCGACAGCAGTAGCAACAGCAACAGC
AAGACGAAGACATCGACATCTGCCGAGGGGAGTAAATTGACACATACTGG
GATAGCAGATGAGCGAGAAGATTGCGTGCACGGGACAGAAGGAGTCAAGA
TATCGGTGAGGGGGATCGGTGCCTCGGTATGGAACGGGGCGGTCGGTAGA
GTGTGCATTTCAGGGCCTATCACGGGGTCGTGGGACCAGGCGGGACAAAG
GGATGACGGTCTCGTCCTATCTCGTCCCAGCCAAATCTCAACCGAGCTAT
TCCATCCCAAGTCGTCGAAATATCAACCCTCATTGTCCCCTCCCGTTACA
AGTCAAATACCAACCCTCCTCATGCCGTCCCGTTACAAGATAAATATCCC
AGTGTCCCATCCGGTCCGGTGAGGTCCCATGATGATCCCTGATGGATTTG
ACGATAGGGAATGGTAAGATTAACATTTATGGGGGGCTCACACCGCGACA
ATATGTTTTCTGATACCTTCCTTTTGGCCATGTTGTCCACGCAAATAGGC
GGTTATCATGCTTGAAAATAACAATCGAGGTGACTGTATAGGCAAGGGAA
TGATCTCTCGTCCTCTCTGAGAAGAGCGCGTTGGTTGATGCATCGCTACA
TTGCCCTTCCGCCGAAAGAGCAACTGCTCTTGTTTCGCGCTGATCATGCG
CCCCCCAAGGGGTTAACGAAGCCAAGAAATGTAGCTGAAATTTGTAGCGA
ACGCCTTCAGTCTCTGTCTGTAGCCTCGTGTGGTTGGCCAGTTCGTGTAT
AGCCACCCCGAATGAAGCAAATTTGCGTTATTCATGCTCTTTTTTTCTCG
CTTCGTTGTAAACTACATTGGGTGCGCAAGGCGTGTTTTTGGATAGGTAC
AAGTTGACACCGTTGAGTCAATCCGTTAGGAGCTGCGTTTACCTAGTCAC
GACCAAATCGTAGATTTGCTAACTAGCAACCAGTCGTGAATAATGACGGA
TGCGTCCGGTTGGCGTTTCTTAGGTCCGAAACGGGTTCACTTTTTTGCCA
ATTGGGGCCTTATTATCTTGGATTGAGTGACGAGCGAGGACCGGCATCGT
CGGGCTTGCATCATCACGACCAACTAACCTCTGTGGAGCTTATTAGGGAG
CCGTGACAGGCTGCTAGCATTTTGTCGTCTACCGGGGAAACATTGTGTTC
TCACACTAGCTGTTTTATTTGTTGTCAACCCCCCCCCCCCTGTGTCCCCT
CGAAAACAAAACGAGAAGGAAATATCTCAATCTAGCCTGCGGCGTTTTGG
TACATTCACATAACGTCGACAAAAACCAGACAGCCAGTACTTTTACTTTA
TATTTCCAAGTTTCTTCGGATAGGATGGTTGGTTTGATCCCGATCGGCAT
AAAAAGCTCTCGGGTATTTACAGAACAAGGCAATGATGCCACATAGAGGA
ATGTCGCTTACCAGGAGAGGGGGAGGAGGGGGGGGGTGGGGAAGATAGTT
GAACTAGAACTCTGCACCTCATGCTGTGACTCCGTTGTACCCATGTTGAG
GTTATGCGGCTGACTTCAATCTGCAGTTGGGTACCCTTATTAACACATTT
TAATTAATAAGGGAGGAGGGCAAGATTACTGAAGGGAAAAGAGAAATTCA
TAAGTACAAGCAGGTATGAACTGAAGACTGTAAAAAACATCACAATATTC
GTGGAGCAAAATGGAGATATGCTCAGCGTCTTCAAGCTGGGGGATTACTT
GGTTATTGTCCACACATTGAGCAAACTCAGGTGGAGGCAGTGGGACCTAC
TCATGTTTTGCATGCCGTAGTTGTTAAACCGTTGATCGTGCATCCAGTCC
TCAATAGGACAGATCTTTGACCGTGTAAGATCGATATCTGGGAGCTAATC
GCTCATTGCTACGCTGCCATATGTGTCTAAAAACAAGCGTTTACTTCGTT
ATCTGTTATTATATACCTCAGCCCTCGCTGTTCAAGCAGGGCGGTAGTAT
TCGGTGTAATACGCAGGAGGGTGGCCAGGCGCAGCAGCAGCAGCAACAGC
AACAGCTGATGGCGAAGATGGTATTGAACGGGCGACGTTGCTTGCCCTGG
CAGGCGTGCATA back to topCoding sequence (CDS) from alignment at H-paniculata_contig18828:1647..3858- >mRNA_H-paniculata_contig18828.4691.1 ID=mRNA_H-paniculata_contig18828.4691.1|Name=mRNA_H-paniculata_contig18828.4691.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=774bp|location=Sequence derived from alignment at H-paniculata_contig18828:1647..3858- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTGGAGTTGGAACAAGCAGAACAAGAACAAGAACGACAAGCACATCA
CGCCTTCGCGTACCCTTCCACCGGTTCCAATCACCTCTCCGCAGAACCCG
AACCTAATTGGGCGGCCGACAGCAGTAGCAACAGCAACAGCAAGACGAAG
ACATCGACATCTGCCGAGGGGAGTAAATTGACACATACTGGGATAGCAGA
TGAGCGAGAAGATTGCGTGCACGGGACAGAAGGAGTCAAGATATCGATGC
TGGAGTTGGAACAAGCAGAACAAGAACAAGAACGACAAGCACATCACGCC
TTCGCGTACCCTTCCACCGGTTCCAATCACCTCTCCGCAGAACCCGAACC
TAATTGGGCGGCCGACAGCAGTAGCAACAGCAACAGCAAGACGAAGACAT
CGACATCTGCCGAGGGGAGTAAATTGACACATACTGGGATAGCAGATGAG
CGAGAAGATTGCGTGCACGGGACAGAAGGAGTCAAGATATCGCCCTCGCT
GTTCAAGCAGGGCGGTAGTATTCGGTGTAATACGCAGGAGGGTGGCCAGG
CGCAGCAGCAGCAGCAACAGCAACAGCTGATGGCGAAGATGGTATTGAAC
GGGCGACGTTGCTTGCCCTGGCAGGCGTGCATACCCTCGCTGTTCAAGCA
GGGCGGTAGTATTCGGTGTAATACGCAGGAGGGTGGCCAGGCGCAGCAGC
AGCAGCAACAGCAACAGCTGATGGCGAAGATGGTATTGAACGGGCGACGT
TGCTTGCCCTGGCAGGCGTGCATA back to top
|