prot_H-paniculata_contig18823.4687.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18823.4687.1
Unique Nameprot_H-paniculata_contig18823.4687.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length229
Homology
BLAST of mRNA_H-paniculata_contig18823.4687.1 vs. uniprot
Match: A0A6H5JK18_9PHAE (F-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK18_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 5.780e-53
Identity = 114/244 (46.72%), Postives = 144/244 (59.02%), Query Frame = 0
Query:    1 QGPWHRRGNSRFSFLARLHDTIAGGEAAAAVAAAGEMAEMPAGLDGGRQSPLGTA-AAETGARAEAERLRRRAPIGYGSWRAEMKANACHVPSVMLAKVEDHTDEVLDLKFSPDGKHLASCSRDSYILVYDIVSNNXXXXXXXXXXRNIKRCVEMGGGGRDVGAGRAERG-----------GIDGEEEDA---FQPLGYRGLSLRLVHRLKRSVNAAVCRLFWSPCSRYLLSCLEEPQGNPANP 229
            +GPWHRRGNSR SFL RLHD++A  +  AA  A    +  P   D  R +P     A ET +     RLR      +G WR E+KAN CHVP+V L K++DHTDEVLDLKFSPDG  LA+CSRD  ILVY I +             ++K+      GG+D    +A  G           G+D    D     +PLG++GL +RL+HRL+RS  A+VCR+FWSPC R++LSCLEEP GNP NP
Sbjct:  136 EGPWHRRGNSRISFLGRLHDSLADADGGAAAVANTHPSAPP---DSSRGAPAAAEKAGETRSFPNWPRLR------HGRWREEVKANCCHVPAVELVKLDDHTDEVLDLKFSPDGTLLATCSRDMSILVYAIEA-------MPENHGSLKK------GGKDRSPRKARAGXXXXXXXXXDTGVDEMPRDGQNKLRPLGFKGLGVRLIHRLRRSATASVCRIFWSPCGRFILSCLEEPNGNPFNP 357          
BLAST of mRNA_H-paniculata_contig18823.4687.1 vs. uniprot
Match: D7G5J6_ECTSI (F-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5J6_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 4.590e-52
Identity = 109/233 (46.78%), Postives = 139/233 (59.66%), Query Frame = 0
Query:    1 QGPWHRRGNSRFSFLARLHDTIAGGEA-AAAVAAAGEMAEMPAGLDGGRQSPLGTA-AAETGARAEAERLRRRAPIGYGSWRAEMKANACHVPSVMLAKVEDHTDEVLDLKFSPDGKHLASCSRDSYILVYDI--VSNNXXXXXXXXXXRNIKRCVEMGGGGRDVGAGRAERGGIDGEEEDAFQPLGYRGLSLRLVHRLKRSVNAAVCRLFWSPCSRYLLSCLEEPQGNPANP 229
            QGPWHRRGNSR SFL RLHD++AG +A   A A +      PA  D  R +P     A ET +  +  RLR      +G WR E+KAN CHVP+V L K++DHTDEVLDLKFSPDG  LA+CSRD  ILVY I  +  N             ++    G               +  + ++  +PLG++GL +RL+HRL+RS  A+VCR+FWSPC R++LSCLEEP GNP  P
Sbjct:   53 QGPWHRRGNSRLSFLGRLHDSLAGQDADGGAAAVSNTPPSTPA--DSSRGAPAAAEKAGETRSFPDWPRLR------HGRWREELKANCCHVPAVELVKLDDHTDEVLDLKFSPDGTRLATCSRDMSILVYAIEAMPENHGSSKEGEKDDGPRKARASGXXXXXXXXXXXGVDEMPRDGQNKLRPLGFKGLGVRLIHRLRRSATASVCRIFWSPCGRFILSCLEEPHGNPFIP 277          
BLAST of mRNA_H-paniculata_contig18823.4687.1 vs. uniprot
Match: A0A7S2FRI1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FRI1_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 9.460e-10
Identity = 28/57 (49.12%), Postives = 41/57 (71.93%), Query Frame = 0
Query:   77 GSWRAEMKANACHVPSVMLAKVEDHTDEVLDLKFSPDGKHLASCSRDSYILVYDIVS 133
            G+W+ E+K N   VP V++ K++DH+DEVLD  FS DG  LA+CSRD   L+Y++ +
Sbjct:   40 GTWKNELKQNVECVPQVLIHKLKDHSDEVLDAVFSIDGTKLATCSRDLKTLIYEVTT 96          
BLAST of mRNA_H-paniculata_contig18823.4687.1 vs. uniprot
Match: A0A812UCT2_SYMPI (PAP13 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812UCT2_SYMPI)

HSP 1 Score: 62.0 bits (149), Expect = 1.030e-7
Identity = 33/75 (44.00%), Postives = 45/75 (60.00%), Query Frame = 0
Query:   57 AETGARAEAERLRRRAPIGYGSWRAEMKANACHVPSVMLAKVEDHTDEVLDLKFSPDGKHLASCSRDSYILVYDI 131
            AE   +  A   R R P+  GSW+ E+K N    P+ ML ++ DH+DEVL + FSP G  LASCSRD   +V+ +
Sbjct:  190 AEPSQKVRARDERSREPL-RGSWKEELKHNVLQAPTQMLTQLNDHSDEVLFVVFSPCGTRLASCSRDLQTIVFKV 263          
BLAST of mRNA_H-paniculata_contig18823.4687.1 vs. uniprot
Match: A0A813B4T2_SYMMI (Wdr26 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A813B4T2_SYMMI)

HSP 1 Score: 59.3 bits (142), Expect = 1.370e-6
Identity = 41/125 (32.80%), Postives = 62/125 (49.60%), Query Frame = 0
Query:    8 GNSRFSFLARL-HDTIAGGEAAAAVAAAGEMAEMPAGLDGGRQSPLGTAAAETGARAEAERLRRRAPIGYGSWRAEMKANACHVPSVMLAKVEDHTDEVLDLKFSPDGKHLASCSRDSYILVYDI 131
            G SRFSFL+   H   +G  ++++ A+AG + +     D   + PL                        GSW+ E+K N    P+ ML ++ +H+DEVL + FSP G  LASCSRD   +V+ +
Sbjct:  474 GKSRFSFLSPPPHLPKSGAVSSSSTASAGPLQKAARPRDERPREPL-----------------------RGSWKEELKHNVLQAPTHMLTQLNEHSDEVLFVVFSPCGTRLASCSRDLQTIVFKV 575          
BLAST of mRNA_H-paniculata_contig18823.4687.1 vs. uniprot
Match: A0A813CRT9_9DINO (Wdr26 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CRT9_9DINO)

HSP 1 Score: 58.9 bits (141), Expect = 1.880e-6
Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = 0
Query:   77 GSWRAEMKANACHVPSVMLAKVEDHTDEVLDLKFSPDGKHLASCSRDSYILVYDI 131
            GSW+ E+K N    P+ ML ++ +H+DEVL + FSP G  LASCSRD   +V+ +
Sbjct:  667 GSWKEELKHNVLQAPTHMLTQLNEHSDEVLFVVFSPCGTRLASCSRDLQTIVFKV 721          
BLAST of mRNA_H-paniculata_contig18823.4687.1 vs. uniprot
Match: A0A1Q9CFV0_SYMMI (Uncharacterized protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9CFV0_SYMMI)

HSP 1 Score: 58.9 bits (141), Expect = 1.950e-6
Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = 0
Query:   77 GSWRAEMKANACHVPSVMLAKVEDHTDEVLDLKFSPDGKHLASCSRDSYILVYDI 131
            GSW+ E+K N    P+ ML ++ +H+DEVL + FSP G  LASCSRD   +V+ +
Sbjct:  667 GSWKEELKHNVLQAPTHMLTQLNEHSDEVLFVVFSPCGTRLASCSRDLQTIVFKV 721          
BLAST of mRNA_H-paniculata_contig18823.4687.1 vs. uniprot
Match: UPI000E6E297D (F-box/WD repeat-containing protein 5 n=1 Tax=Ctenocephalides felis TaxID=7515 RepID=UPI000E6E297D)

HSP 1 Score: 55.5 bits (132), Expect = 2.440e-5
Identity = 26/56 (46.43%), Postives = 37/56 (66.07%), Query Frame = 0
Query:   75 GYGSWRAEMKANACHVPSVMLAKVEDHTDEVLDLKFSPDGKHLASCSRDSYILVYD 130
            G  SW +E K    HVP V    ++DH+++VL + FS DGK  A+CS+D YILV++
Sbjct:   77 GAKSWYSEYKRLRYHVPLVCTEFLKDHSNQVLHVSFSNDGKLFATCSKDGYILVWN 132          
BLAST of mRNA_H-paniculata_contig18823.4687.1 vs. uniprot
Match: M5CGE9_THACB (NACHT domain-containing protein n=1 Tax=Thanatephorus cucumeris (strain AG1-IB / isolate 7/3/14) TaxID=1108050 RepID=M5CGE9_THACB)

HSP 1 Score: 53.9 bits (128), Expect = 9.110e-5
Identity = 25/69 (36.23%), Postives = 41/69 (59.42%), Query Frame = 0
Query:   93 VMLAKVEDHTDEVLDLKFSPDGKHLASCSRDSYILVYDIVSNNXXXXXXXXXXRNIKRCVEMGGGGRDV 161
            ++L  ++ HTD V+ ++FSPDG H+ASCSRD  I  +D+              +N+++  +MGGG  D+
Sbjct: 1267 LILGPLKGHTDNVIGVRFSPDGSHIASCSRDKTIRFWDV----------SILEKNLQQRTDMGGGAYDL 1325          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18823.4687.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5JK18_9PHAE5.780e-5346.72F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
D7G5J6_ECTSI4.590e-5246.78F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S2FRI1_9STRA9.460e-1049.12Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A812UCT2_SYMPI1.030e-744.00PAP13 protein n=1 Tax=Symbiodinium pilosum TaxID=2... [more]
A0A813B4T2_SYMMI1.370e-632.80Wdr26 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A813CRT9_9DINO1.880e-647.27Wdr26 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A1Q9CFV0_SYMMI1.950e-647.27Uncharacterized protein n=2 Tax=Symbiodinium TaxID... [more]
UPI000E6E297D2.440e-546.43F-box/WD repeat-containing protein 5 n=1 Tax=Cteno... [more]
M5CGE9_THACB9.110e-536.23NACHT domain-containing protein n=1 Tax=Thanatepho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 91..130
e-value: 4.9E-8
score: 42.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 98..130
e-value: 4.8E-5
score: 24.0
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 98..139
score: 12.747
NoneNo IPR availablePANTHERPTHR22838WD REPEAT PROTEIN 26-RELATEDcoord: 81..219
NoneNo IPR availablePANTHERPTHR22838:SF0WD REPEAT-CONTAINING PROTEIN 26coord: 81..219
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 98..139
score: 11.919
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 95..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18823contigH-paniculata_contig18823:1356..4567 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18823.4687.1mRNA_H-paniculata_contig18823.4687.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18823 1356..4567 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18823.4687.1 ID=prot_H-paniculata_contig18823.4687.1|Name=mRNA_H-paniculata_contig18823.4687.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=229bp
QGPWHRRGNSRFSFLARLHDTIAGGEAAAAVAAAGEMAEMPAGLDGGRQS
PLGTAAAETGARAEAERLRRRAPIGYGSWRAEMKANACHVPSVMLAKVED
HTDEVLDLKFSPDGKHLASCSRDSYILVYDIVSNNSSNSSSSSNNRNIKR
CVEMGGGGRDVGAGRAERGGIDGEEEDAFQPLGYRGLSLRLVHRLKRSVN
AAVCRLFWSPCSRYLLSCLEEPQGNPANP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf