prot_H-paniculata_contig1882.4685.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1882.4685.1
Unique Nameprot_H-paniculata_contig1882.4685.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length233
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1882.4685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 232..232
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 212..231
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..211
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.598

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1882contigH-paniculata_contig1882:11269..13899 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1882.4685.1mRNA_H-paniculata_contig1882.4685.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1882 9291..21384 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1882.4685.1 ID=prot_H-paniculata_contig1882.4685.1|Name=mRNA_H-paniculata_contig1882.4685.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=233bp
MLGGIATIALTISSVVNGVAASQHLNQPTAAAATATAVNESAQRLRVGAE
RKLLLSTSECSVEFTTCSSDLDCVHCTSDSEVNTTECLDVYPHDPAGTTS
YFCHLIASTFCCALMYLSHVDAETCMTEGEPALDYWTCSLEDNGCSIEDM
PCYGEAASFYFAPTPSPVSAVAEEGNSEAMTGDDGNSFEKVEAEERTSTA
AGTIRAFDTSKAGLWVCGAASGLVAAVAAFAW*
back to top